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Submitted SNP(ss) Details: ss19829355           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuFF-200402.chr1.NT_004668.16_7096685
RefSNP(rs#)rs7536834
Submitted Batch IDCSHL-HuFF-200402
Submitted DateFeb 21, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 21 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUFF-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuFF101b19600400760843.R 396 42

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19829355|allelePos=253|len=565|taxid=9606|alleles='A/G'|mol=Genomic
 ACACTAATAG ACGCAATTCA GAGGTAAACA GATCTGGAGA TTTCATTTAA GAAAAAAAGA
 ATGTCAAGGA AGGAAGCATC TGGGAAAGGA GTAAAGTTTG GCTATGACAA ACAAAATAGG
 CTTCAGATAA AATGGTCTCC CCCCACCCAA AAATAAAGCA CATAAAGTAG ACGAGATAGG
 AGATCAACCT GTAACCTGTC ACCTATATAT GTACTGATGT CCTCATCTCT GTGAGCTGGG
 AATTTTAATA GA
 R
 ATTACATTAT AGGGTAGTTT AATATTAATA CCTAAAAGGT ATTTGGAACA TTATTTGACA
 GAGTAAAGCT CAGTAAATAC TAGAAAACAT AGTAGTACTG ataaataatt gttattattt
 tattattatG CCTTGGCTAG TGCTGAGCTG CTTCTTGTTT CTGTGTCTTT TTTTAGGCTA
 TGAAGAAAAT CTTATTTAAA TAAACAACAA AAATTAACAG ATTgattaat gtggttcctg
 tacaaggatg acatccacat tcgtgaTGTG GAGATAACAT CAGGTAGTAA CAACGTTCAT
 GGTTTTGAGC CA

  Submitted Frequency for ss19829355 back to top
There is no frequency submission for ss19829355.


  dbSNP summary of Genotypes for ss19829355 back to top
No sufficient data to compute Hardy-weinberg probability for ss19829355.


  Submitted individual genotype for ss19829355 back to top
There is no individual genotype data for ss19829355.

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