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Submitted SNP(ss) Details: ss171806671           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chr22_14604604
RefSNP(rs#)rs1988181
Submitted Batch IDNA20431_snpassay_chr22
Submitted DateOct 01, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPOct 1 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss171806671|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 CATGAGCCAC CATGCCCAGC CAGAATATTG CTACTTTTGC AAATAGCTAC AAATGATCCT
 GATCTGGACA CACTGAGTTG ATCATAGCTT TGTAAAAGAG GATAGCATTG TAAAACTACA
 AAATTAGACT AATAATAAAT AACATAGAAT GCTTTCACTA TAAGAAATAA TACTATCCTA
 AGCAAAAATA AATAAATAAA TAAAACTGGA GGAATTATAT TTTCTGACTT CATATTATAC
 CACAGAATTA
 Y
 AGCAACCAAA AGAGTATGGT ACTGGCATAA AAATAGACCC ATAGATCAAT GGAACAGAAT
 AGAGAACCCA GTAACAAATG TACAAATGTA CCTACAGTGA ACTCATTTTT GACAAAGGTG
 CCAAGAACAT ACACTGGTGG GAAATGGTAT TGAAAAAACT GGATATCCAT ATGCAGAAGA
 ATGAAAACAG ACTAGTATCT ATCACCAAAT ACAAAAGTAA AATCAAAGTT GTTTAAAGAT
 GTAAAGCCAA

  Submitted Frequency for ss171806671 back to top
There is no frequency submission for ss171806671.


  dbSNP summary of Genotypes for ss171806671 back to top
No sufficient data to compute Hardy-weinberg probability for ss171806671.


  Submitted individual genotype for ss171806671 back to top
There is no individual genotype data for ss171806671.

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