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Submitted SNP(ss) Details: ss165980890           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chr1_556796
RefSNP(rs#)rs113120793
Submitted Batch IDNA20431_snpassay_chr1
Submitted DateSep 30, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 30 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss165980890|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 GCTTTGGCAA CTGACTAGTT CCCCTAATAA TCGGTGCCCC CGATATGGCG TTTCCCCGCA
 TAAACAACAT AAGCTTCTGA CTCTTACCCC CCTCTCTCCT ACTCCTGCTT GCATCTGCTA
 TAGTGGAGGC CGGCGCAGGA ACAGGTTGAA CAGTCTACCC TCCCTTGGCA GGGAACTACT
 CCCACCCTGG AGCCTCCGTA GACCTAACCA TCTTCTCCTT ACACCTAGCA GGTATCTCCT
 CTATCTTAGG
 R
 GCCATCAATT TCATCACAAC AATTATTAAT ATAAAACCCC CTGCCATAAC CCAATACCAA
 ACGCCCCTTT TCGTCTGATC CGTCCTAATC ACAGCAGTCT TACTTCTCCT ATCTCTCCCA
 GTCCTAGCCG CTGGCATCAC TATACTACTA ACAGACCGTA ACCTCAACAC CACCTTCTTC
 GACCCAGCCG GAGGAGGAGA CCCCATTCTA TACCAACACC TATTCTGATT TTTCGGTCAC
 CCTGAAGTTT

  Submitted Frequency for ss165980890 back to top
There is no frequency submission for ss165980890.


  dbSNP summary of Genotypes for ss165980890 back to top
No sufficient data to compute Hardy-weinberg probability for ss165980890.


  Submitted individual genotype for ss165980890 back to top
There is no individual genotype data for ss165980890.

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