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Submitted SNP(ss) Details: ss165980888           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chr1_556779
RefSNP(rs#)rs3949348
Submitted Batch IDNA20431_snpassay_chr1
Submitted DateSep 30, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 30 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss165980888|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 ACCCATCATA ATCGGAGGCT TTGGCAACTG ACTAGTTCCC CTAATAATCG GTGCCCCCGA
 TATGGCGTTT CCCCGCATAA ACAACATAAG CTTCTGACTC TTACCCCCCT CTCTCCTACT
 CCTGCTTGCA TCTGCTATAG TGGAGGCCGG CGCAGGAACA GGTTGAACAG TCTACCCTCC
 CTTGGCAGGG AACTACTCCC ACCCTGGAGC CTCCGTAGAC CTAACCATCT TCTCCTTACA
 CCTAGCAGGT
 R
 TCTCCTCTAT CTTAGGAGCC ATCAATTTCA TCACAACAAT TATTAATATA AAACCCCCTG
 CCATAACCCA ATACCAAACG CCCCTTTTCG TCTGATCCGT CCTAATCACA GCAGTCTTAC
 TTCTCCTATC TCTCCCAGTC CTAGCCGCTG GCATCACTAT ACTACTAACA GACCGTAACC
 TCAACACCAC CTTCTTCGAC CCAGCCGGAG GAGGAGACCC CATTCTATAC CAACACCTAT
 TCTGATTTTT

  Submitted Frequency for ss165980888 back to top
There is no frequency submission for ss165980888.


  dbSNP summary of Genotypes for ss165980888 back to top
No sufficient data to compute Hardy-weinberg probability for ss165980888.


  Submitted individual genotype for ss165980888 back to top
There is no individual genotype data for ss165980888.

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