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Submitted SNP(ss) Details: ss162980583           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr1_346306
RefSNP(rs#)rs75715938
Submitted Batch IDNA19240_snpassay_chr1
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss162980583|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 AAATGAGAAC TTTTAAAATA TTCAACTTTT AGCCCTTGAC ATGCAAAATG AGTTCATTAC
 ATGGTAAGGA TGAGGGAGAA AGAAAAGATC TGAAAAAGTA GAAGAGTGAT GGATTCAGAA
 AGTATAGGAT GATTGTCAGT GTGATTGTTT TATCTAGCCA CATATAGCTG TGTGGTATCA
 AGATGTAGAA GGCAGAGAGT AGGATTTATC AGGATTGTTG TTTGGAAGAG TGAGTACAAT
 CATTACGAGG
 R
 AGCAAGGTAT TGATCATGGA ATATAAAGTG GGAAAAGAGG TAAGGTAAGA AGGATATCAG
 TAAAGTGAAT GACAGCATAA ATATGGTAGA ACCGTTGGAT TGGTGGCTCT GGAGGAATTG
 AATAATTATT AGACTTGAAG CATTAGATGG TGCATTAGTG AGGGCATCTC CAACTAAGTC
 TACCATCAAG TCATGGTGAT TTATTATCTC AAATATATGA CAAATTTATC TACTTATTTC
 CAAAACTCCC

  Submitted Frequency for ss162980583 back to top
There is no frequency submission for ss162980583.


  dbSNP summary of Genotypes for ss162980583 back to top
No sufficient data to compute Hardy-weinberg probability for ss162980583.


  Submitted individual genotype for ss162980583 back to top
There is no individual genotype data for ss162980583.

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