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Submitted SNP(ss) Details: ss162980580           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr1_62650
RefSNP(rs#)rs62641289
Submitted Batch IDNA19240_snpassay_chr1
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss162980580|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 TCAAAACCAC AATGAGATGC CATCTCACAC CAGTTAGAAT GGCAATCATT AAAAAGTCAG
 GAAACAATAG ATGCTGGAGA GGATGTGGAG AAATAGGAAT GCTTTTACAC TGTTGGTGGG
 AGCGTACATT AGTTCAACCA TTGTGGAAGA CAGTGTGGTG TTTCCTCAAG GATCTAAAAC
 TAGAAATACC ATTTGACCCA GCAATCCCAT TACTGGGTAT ATACCCAAAC GATTGTAAGT
 CATTCTACTA
 Y
 AAAGACACAT GCACAGGTAT GTTTATTGCA GCACTATTCA CAATAGGGAA GACTTGGAAC
 CAACCCAAAT GCCCGTCAAT GTTAGACTAG ATAAAATGTG GCACATAGAC CTGGTCTTAA
 AATCAAGAAC AGAGATTGTT ACTTTTACAT CCATTCCTAA TTGATAAACC ATTCAGTTAT
 ACCACATCTT AGCTTCTGGA CTACAATGAC CATATTTGGG GTTTTCTTTC TAATTTCATT
 ATAGGTTCAG

  Submitted Frequency for ss162980580 back to top
There is no frequency submission for ss162980580.


  dbSNP summary of Genotypes for ss162980580 back to top
No sufficient data to compute Hardy-weinberg probability for ss162980580.


  Submitted individual genotype for ss162980580 back to top
There is no individual genotype data for ss162980580.

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