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Submitted SNP(ss) Details: ss162980574           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr1_59415
RefSNP(rs#)rs2531266
Submitted Batch IDNA19240_snpassay_chr1
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss162980574|allelePos=251|len=501|taxid=9606|alleles='C/G'|mol=Genomic
 CCCCCAAGAT GATTACTGAC TTTTTCAGCC AGCGCAAAGT CATCTCTTTC AAGGGCTGCC
 TTGTTCAGAT ATTTCTCCTT CACTTCTTTG GTGGGAGTGA GATGGTGATC CTCATAGCCA
 TGGGCTTTGA CAGATATATA GCAATATGCA AGCCCCTACA CTACACTACA ATTATGTGTG
 GCAACGCATG TGTCGGCATT ATGGCTGTCA CATGGGGAAT TGGCTTTCTC CATTCGGTGA
 GCCAGTTGGC
 S
 TTTGCCGTGC ACTTACTCTT CTGTGGTCCC AATGAGGTCG ATAGTTTTTA TTGTGACCTT
 CCTAGGGTAA TCAAACTTGC CTGTACAGAT ACCTACAGGC TAGATATTAT GGTCATTGCT
 AACAGTGGTG TGCTCACTGT GTGTTCTTTT GTTCTTCTAA TCATCTCATA CACTATCATC
 CTAATGACCA TCCAGCATCG CCCTTTAGAT AAGTCGTCCA AAGCTCTGTC CACTTTGACT
 GCTCACATTA

  Submitted Frequency for ss162980574 back to top
There is no frequency submission for ss162980574.


  dbSNP summary of Genotypes for ss162980574 back to top
No sufficient data to compute Hardy-weinberg probability for ss162980574.


  Submitted individual genotype for ss162980574 back to top
There is no individual genotype data for ss162980574.

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