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Submitted SNP(ss) Details: ss162980571           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr1_59316
RefSNP(rs#)rs2854682
Submitted Batch IDNA19240_snpassay_chr1
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss162980571|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 TTGTCATAAC AGTGGTATCT GACTCCCACC TTCACTCTCC CATGTACTTC CTGCTAGCCA
 ACCTCTCACT CATTGATCTG TCTCTGTCTT CAGTCACAGC CCCCAAGATG ATTACTGACT
 TTTTCAGCCA GCGCAAAGTC ATCTCTTTCA AGGGCTGCCT TGTTCAGATA TTTCTCCTTC
 ACTTCTTTGG TGGGAGTGAG ATGGTGATCC TCATAGCCAT GGGCTTTGAC AGATATATAG
 CAATATGCAA
 R
 CCCCTACACT ACACTACAAT TATGTGTGGC AACGCATGTG TCGGCATTAT GGCTGTCACA
 TGGGGAATTG GCTTTCTCCA TTCGGTGAGC CAGTTGGCGT TTGCCGTGCA CTTACTCTTC
 TGTGGTCCCA ATGAGGTCGA TAGTTTTTAT TGTGACCTTC CTAGGGTAAT CAAACTTGCC
 TGTACAGATA CCTACAGGCT AGATATTATG GTCATTGCTA ACAGTGGTGT GCTCACTGTG
 TGTTCTTTTG

  Submitted Frequency for ss162980571 back to top
There is no frequency submission for ss162980571.


  dbSNP summary of Genotypes for ss162980571 back to top
No sufficient data to compute Hardy-weinberg probability for ss162980571.


  Submitted individual genotype for ss162980571 back to top
There is no individual genotype data for ss162980571.

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