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Submitted SNP(ss) Details: ss162980550           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr1_48914
RefSNP(rs#)rs2691352
Submitted Batch IDNA19240_snpassay_chr1
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss162980550|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 GTCTTTTCCT CCAGACAAGC TCCTTTGGGT CATCAGGATT TCTTCAACAA TAAAATGTAA
 TAATTCCAAA TGTTTGTAAC AGAATGGGTA GGACTTTCTT CACTTATTTA AATACTCCCT
 TTTTTATGCA ACTGAGTTTT CATCAACAAG TACAAGCTTG TGAAGGAGTA CTTTAAAATG
 CAATTTCTCT CTATTTTTGT GGGGGCTAAT ATTTTATTTC TCATATTGAC AATTTATTAT
 GCTGTTTTTA
 R
 AAAGTTCATT CATCAAGTAT TTCTTGAGCT TTTTCTATGA GACAGGCACT GTTTTAGGCA
 AGTAATTATG CACTGAACAA TGCAAAAAGT TTCCCTGCAC TCATGGACTT TAATTTTACA
 TTTATGAAAA GCTACAAATA TTAGAATAAG TAAAATACTG CCTGGAGGCT AAAGCATATT
 TTGATCACTT ATTCCCTAAT TCTTTTAGAA GAGAACTCAC CTGTCGGTTA GCTGAACCAC
 TGCCAGTGAT

  Submitted Frequency for ss162980550 back to top
There is no frequency submission for ss162980550.


  dbSNP summary of Genotypes for ss162980550 back to top
No sufficient data to compute Hardy-weinberg probability for ss162980550.


  Submitted individual genotype for ss162980550 back to top
There is no individual genotype data for ss162980550.

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