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Submitted SNP(ss) Details: ss162980547           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr1_48074
RefSNP(rs#)rs2691335
Submitted Batch IDNA19240_snpassay_chr1
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss162980547|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 CTTCATTTTC CACTCTGAAA AGGAGATGTC TGATCTCAGC TATTTCCATC CTATTTGAAA
 ACCAGATTTA GTTTTAAACC AGAGGAAGGG AATCTCAAGT CTTTACCTCC CACAGTCTGG
 TGTGATTCTC TCTCTTTTGG TATTACCTTC CTCCACATTG GAACACTCCA GCCAATGCAT
 AGGCTGAGAG GCTATCTCAG ATTCAGAAAG ATTTGGCCTC ATCCCAGGGG AGGGTACAGA
 GGAGCTGATG
 R
 CTATGAATTC TGAAATGGAA CTGTTCCAGG TTGAAGAAAT AAGAAAGGGA ATTGGGAAGA
 GCAATGCCCA GTGAAAAAGA AGAAATAATA TTTTAGGAAG TGAATGCTAA TTTTATTTTA
 AACAAAATAA GAACTCAAGG AATAAGAGGG TTCTTCCAAT AGGTTAGAGT GATCCTGTCA
 AACATATATG CTTCTAGATT TTTTTAAAGA CTGTTTCTAC TAAGAAAGCA TAGACCGCTA
 TTGAGAAAGA

  Submitted Frequency for ss162980547 back to top
There is no frequency submission for ss162980547.


  dbSNP summary of Genotypes for ss162980547 back to top
No sufficient data to compute Hardy-weinberg probability for ss162980547.


  Submitted individual genotype for ss162980547 back to top
There is no individual genotype data for ss162980547.

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