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Submitted SNP(ss) Details: ss162980544           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr1_46662
RefSNP(rs#)rs2691309
Submitted Batch IDNA19240_snpassay_chr1
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss162980544|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 TCTGCCCACA TTATTCTGCA GTTTTTATCT TGCTTACGTA TTTTTGGAAT GTTACTATTT
 TTCAAAAATT AATTTGGGAT CAACCAACAC TTCTTATTCT GCTGCTGTTC TAGAGAAAAT
 CATTTTCCTC ATTTCTGAAC AAGAGAAAAT GAAATACAGC TCTAAACAAA TGCCACTGTA
 AACCAAGGTG GAGCCTTTGC ACTTTCAGGC CACCATGATA ACCTGGAGAT TAGATTTTTC
 TGTGTCTTTA
 Y
 ATCAATAATA AAGCCAAGCT TCTCCAGGGG TATCCACTAG GCTTGTCTCA ATGGCTCAAT
 ACAGGTCCTT TTGTGAATGA TTACCTCACC CTCATGGAAA CACACTCTTG TTACAGAAAC
 TCAGAATGAT TCTATTTTTT CTTTTATATT TGTATATGTT TTTCCAATAC CTCTGAAAAA
 ACTGATCCAA AAAAAATACA AATTTTAATT GTAGCCAGTC AATTCAGGAA GGATAAAGGT
 CAAAAACTTT

  Submitted Frequency for ss162980544 back to top
There is no frequency submission for ss162980544.


  dbSNP summary of Genotypes for ss162980544 back to top
No sufficient data to compute Hardy-weinberg probability for ss162980544.


  Submitted individual genotype for ss162980544 back to top
There is no individual genotype data for ss162980544.

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