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Submitted SNP(ss) Details: ss11138957           
Submitter
HandleWI_SSAHASNP
Submitter SNP IDchr2.NT_034508.2_166965
RefSNP(rs#)rs2599127
Submitted Batch IDWI-WGS-200310
Submitted DateOct 31, 2003
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPJul 3 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWI-WGS-200310
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS213P64862FB11.T0 534 49S213P62914FB4.T0 -550 31

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss11138957|allelePos=318|len=518|taxid=9606|alleles='T/C'|mol=Genomic
 GCCAGGCTCT GTGTTTTGTG CTTTTACTCT CAAAACAACC CTATTATTAT CCGTGTCCCA
 CAGATGAGGA TGCTGAGCCC CTGAGAGGCT CAGTAGGTGC CTGAAGGCAT TCCAGCCAAG
 AGGTGGCAGA GCCAGGGCCA GCCTGGCCTG AGGACTCTGA AGCTTCCACA GGCACAGCTC
 CTTCATGCCA GCTCTGTGTC GGGATTTTCT GTGGTCATCA CAGCCATCTT CCTGGTCGGC
 TAAGTTACAG ACAGGGTGGA ACTAGGATGG CCAAGCTGGA AGCAGAGCTC ATTCCTGAGC
 AGGGCACCCG GGCCCTG
 Y
 CTATGGTGCT GGGCAGGCTC CTGGTGTGGA GAGTAGGCTC AGATCCTGCT GTCCCTGTGG
 CTGTGGGAGG CTTTTCTAGG CACCCTCCTG ACTGCTAACA CCAGGAGGGC CTATGATATG
 GGACCGCTGC CCCATGACGT GTGCCAGGTT TCTGCACGCG ACTGCTGGGA AAGGCTGGCC
 CTGGGCTGGG TGGACCCGCA

  Submitted Frequency for ss11138957 back to top
There is no frequency submission for ss11138957.


  dbSNP summary of Genotypes for ss11138957 back to top
No sufficient data to compute Hardy-weinberg probability for ss11138957.


  Submitted individual genotype for ss11138957 back to top
There is no individual genotype data for ss11138957.

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