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binding protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827271, updated on 18-Sep-2024

Summary

Official Full Name
binding protein
Primary source
TAIR:AT4G15890
Locus tag
AT4G15890
See related
Araport:AT4G15890
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
DL3985W; FCAALL.407
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Genomic context

Location:
chromosome: 4
Exon count:
10
Sequence:
Chromosome: 4; NC_003075.7 (9017256..9023026)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Cysteine proteinases superfamily protein Neighboring gene kinesin motor protein-like protein Neighboring gene pleiotropic regulatory locus 1 Neighboring gene drought-induced 21

General gene information

NM_001341078.1
NM_117681.3

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
part_of condensin complex  
located_in euchromatin PubMed 
located_in nucleoplasm PubMed 
located_in nucleus  

General protein information

Preferred Names
binding protein
NP_193324.1
  • binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromosome condensation protein, HCP-6-related (InterPro:IPR012371), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT3G57060.1); Has 443 Blast hits to 428 proteins in 158 species: Archae - 0; Bacteria - 0; Metazoa - 188; Fungi - 128; Plants - 61; Viruses - 3; Other Eukaryotes - 63 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    9017256..9023026
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117681.3NP_193324.1  binding protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193324.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O23639, O24610, Q7DLS9
    UniProtKB/TrEMBL
    A0A654FPR9
    Conserved Domains (1) summary
    pfam12717
    Location:8971101
    Cnd1; non-SMC mitotic condensation complex subunit 1
  2. NM_001341078.1NP_001329429.1  binding protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B7R3, A0A654FPR9
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