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    scyl-1 Protein kinase domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 179789, updated on 9-Dec-2024

    Summary

    Official Symbol
    scyl-1
    Official Full Name
    Protein kinase domain-containing protein
    Primary source
    WormBase:WBGene00012337
    Locus tag
    CELE_W07G4.3
    See related
    AllianceGenome:WB:WBGene00012337
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable kinase activity. Is expressed in excretory cell; intestinal cell; spermatheca; uterine epithelial cell; and ventral cord neurons. Human ortholog(s) of this gene implicated in autosomal recessive spinocerebellar ataxia 21. Orthologous to human SCYL1 (SCY1 like pseudokinase 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See scyl-1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    10
    Sequence:
    Chromosome: V; NC_003283.11 (13036894..13041721, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene FIP (Fungus-Induced Protein) Related Neighboring gene Secretory peptide Neighboring gene L-Fucosyltransferase Neighboring gene ncRNA Neighboring gene Putative aminopeptidase W07G4.4

    Interactions

    General gene information

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables kinase activity  

    General protein information

    Preferred Names
    Protein kinase domain-containing protein
    NP_001366843.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      13036894..13041721 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001380793.3NP_001366843.1  Protein kinase domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q23215
      Conserved Domains (3) summary
      sd00044
      Location:313337
      HEAT; HEAT repeat [structural motif]
      pfam13513
      Location:446492
      HEAT_EZ; HEAT-like repeat
      cl21453
      Location:58165
      PKc_like; Protein Kinases, catalytic domain
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