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    indra indra [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38159, updated on 27-Dec-2024

    Summary

    Official Symbol
    indraprovided by FlyBase
    Official Full Name
    indraprovided by FlyBase
    Primary source
    FLYBASE:FBgn0035213
    Locus tag
    Dmel_CG2199
    See related
    AllianceGenome:FB:FBgn0035213
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG2199; Dmel\CG2199; FBpp0072605
    Summary
    Enables rDNA binding activity. Involved in maintenance of rDNA. Is active in nucleolus. Is expressed in several structures, including anterior endoderm; embryonic/larval midgut; embryonic/larval midgut primordium; foregut primordium; and gastric caecum. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See indra in Genome Data Viewer
    Location:
    61F7-61F7; 3-0 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (1339460..1342403, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (1339460..1342403, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene mitotic spindle density 1 Neighboring gene mitotic spindle density 5 Neighboring gene Hydroxymethylbilane synthase Neighboring gene Protein tyrosine phosphatase 61F Neighboring gene uncharacterized protein Neighboring gene transfer RNA:Glutamic acid-CTC 3-1 Neighboring gene roughoid

    Genomic regions, transcripts, and products

    Interactions

    General gene information

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in nucleolus PubMed 
    is_active_in nucleus  
    located_in nucleus  
    located_in nucleus  

    General protein information

    Preferred Names
    indra
    Names
    CG2199-PA
    CG2199-PB
    CG2199-PC
    indra-PA
    indra-PB
    indra-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      1339460..1342403 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_167873.2NP_728599.1  indra, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_728599.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A9UNC2, H0RNL4, M9PBH8, Q29R03, Q6NNC3, Q8IRH5, Q960W3, Q9W0G3
      Related
      FBpp0072605
      Conserved Domains (1) summary
      sd00019
      Location:418439
      ZF_C2H2; C2H2 Zn finger [structural motif]
    2. NM_138260.5NP_612104.1  indra, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_612104.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8IRH5
      UniProtKB/TrEMBL
      M9PBH8
      Related
      FBpp0072606
      Conserved Domains (1) summary
      sd00019
      Location:409430
      ZF_C2H2; C2H2 Zn finger [structural motif]
    3. NM_001274323.1NP_001261252.1  indra, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261252.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8IRH5
      UniProtKB/TrEMBL
      M9PBH8
      Conserved Domains (1) summary
      sd00019
      Location:409430
      ZF_C2H2; C2H2 Zn finger [structural motif]
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