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Vacuolar iron transporter (VIT) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838710, updated on 18-Sep-2024

Summary

Official Full Name
Vacuolar iron transporter (VIT) family protein
Primary source
TAIR:AT1G21140
Locus tag
AT1G21140
See related
Araport:AT1G21140
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtVTL1; T22I11.3; T22I11_3; Vacuolar Iron Transporter-Like 1; VTL1
Summary
The gene encodes nodulin-like1 whose transcript abundance was repressed under conditions of Fe-deficient growth.
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Genomic context

Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (7404328..7405426)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Mitochondrial transcription termination factor family protein Neighboring gene eukaryotic translation initiation factor 2 (eIF-2) family protein Neighboring gene Exocyst complex component SEC5

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

General gene information

NM_101968.3

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in vacuolar membrane PubMed 

General protein information

Preferred Names
Vacuolar iron transporter (VIT) family protein
NP_173538.2
  • Vacuolar iron transporter (VIT) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT3G43660.1); Has 1867 Blast hits to 1856 proteins in 645 species: Archae - 60; Bacteria - 1279; Metazoa - 0; Fungi - 103; Plants - 211; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    7404328..7405426
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101968.3NP_173538.2  Vacuolar iron transporter (VIT) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173538.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LPU9
    UniProtKB/TrEMBL
    A0A178W9M6, A0A5S9VE67
    Conserved Domains (1) summary
    cl00278
    Location:29169
    CCC1_like; CCC1-related family of proteins
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