U.S. flag

An official website of the United States government

Links from GEO Profiles

    • Showing Current items.

    mtcu-1 TrmE-type G domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 3564835, updated on 9-Dec-2024

    Summary

    Official Symbol
    mtcu-1
    Official Full Name
    TrmE-type G domain-containing protein
    Primary source
    WormBase:WBGene00009557
    Locus tag
    CELE_F39B2.7
    See related
    AllianceGenome:WB:WBGene00009557
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable GTP binding activity and GTPase activity. Predicted to be involved in tRNA methylation and tRNA wobble uridine modification. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 23. Orthologous to human GTPBP3 (GTP binding protein 3, mitochondrial). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See mtcu-1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    6
    Sequence:
    Chromosome: I; NC_003279.8 (14770689..14775007, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Small ribosomal subunit protein eS26 Neighboring gene G-protein coupled receptors family 3 profile domain-containing protein Neighboring gene ncRNA Neighboring gene SH2 domain-containing protein Neighboring gene Mediator of RNA polymerase II transcription subunit 23

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_003279.8

    Bibliography

    Interactions

    General gene information

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables GTP binding  
    enables GTPase activity  
    Process Evidence Code Pubs
    involved_in tRNA methylation  
    involved_in tRNA modification  
    involved_in tRNA processing  
    involved_in tRNA wobble uridine modification  
    Component Evidence Code Pubs
    is_active_in cytoplasm  
    is_active_in mitochondrion  

    General protein information

    Preferred Names
    TrmE-type G domain-containing protein
    NP_493573.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      14770689..14775007 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_061172.7NP_493573.1  TrmE-type G domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_493573.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XTZ1
      Conserved Domains (1) summary
      PRK05291
      Location:1439
      trmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
    External link. Please review our privacy policy.