U.S. flag

An official website of the United States government

transcription factor [ Arabidopsis thaliana (thale cress) ]

Gene ID: 844022, updated on 18-Sep-2024

Summary

Official Full Name
transcription factor
Primary source
TAIR:AT1G76870
Locus tag
AT1G76870
See related
Araport:AT1G76870
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F7O12.4; F7O12_4
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (28856839..28858851)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene exocyst complex component sec5 Neighboring gene Small nuclear ribonucleoprotein family protein Neighboring gene ncRNA Neighboring gene Duplicated homeodomain-like superfamily protein Neighboring gene ncRNA Neighboring gene Duplicated homeodomain-like superfamily protein

Interactions

General gene information

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in nucleus  

General protein information

Preferred Names
transcription factor
NP_177813.1
  • BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi - 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    28856839..28858851
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001334745.1NP_001323232.1  transcription factor [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WBG6, A0A384LLE4, Q9C6K4
    Conserved Domains (1) summary
    pfam13837
    Location:85169
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
  2. NM_001334746.1NP_001323233.1  transcription factor [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WBG6, A0A384LLE4, Q9C6K4
    Conserved Domains (1) summary
    pfam13837
    Location:85169
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
  3. NM_106338.2NP_177813.1  transcription factor [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177813.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WBG6, A0A384LLE4, Q9C6K4
    Conserved Domains (1) summary
    pfam13837
    Location:85169
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
External link. Please review our privacy policy.