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Leucine-rich repeat transmembrane protein kinase [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841779, updated on 18-Sep-2024

Summary

Official Full Name
Leucine-rich repeat transmembrane protein kinase
Primary source
TAIR:AT1G53440
Locus tag
AT1G53440
See related
Araport:AT1G53440
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T3F20.24; T3F20_24
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Genomic context

Location:
chromosome: 1
Exon count:
23
Sequence:
Chromosome: 1; NC_003070.9 (19945869..19951562)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Ubiquitin domain-containing protein Neighboring gene Leucine-rich repeat transmembrane protein kinase Neighboring gene Leucine-rich repeat transmembrane protein kinase Neighboring gene epstein-barr nuclear antigen Neighboring gene craniofacial development protein Neighboring gene mechanosensitive channel of small conductance-like 4 Neighboring gene ncRNA

Interactions

General gene information

NM_104222.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables kinase activity  
enables protein serine/threonine kinase activity  
Component Evidence Code Pubs
located_in plasma membrane PubMed 
located_in plasma membrane  

General protein information

Preferred Names
Leucine-rich repeat transmembrane protein kinase
NP_175749.1
  • Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G53430.1); Has 190921 Blast hits to 136069 proteins in 4848 species: Archae - 114; Bacteria - 18757; Metazoa - 52699; Fungi - 11122; Plants - 85531; Viruses - 458; Other Eukaryotes - 22240 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    19945869..19951562
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104222.2NP_175749.1  Leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175749.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    C0LGG9, Q9LPG0
    UniProtKB/TrEMBL
    A0A178WLP5, A0A5S9WPM4
    Conserved Domains (3) summary
    PLN00113
    Location:74939
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    cd14066
    Location:673940
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    sd00033
    Location:90113
    LRR_RI; leucine-rich repeat [structural motif]
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