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kinase family with leucine-rich repeat domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832662, updated on 18-Sep-2024

Summary

Official Full Name
kinase family with leucine-rich repeat domain-containing protein
Primary source
TAIR:AT5G25930
Locus tag
AT5G25930
See related
Araport:AT5G25930
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F18A17.4
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Genomic context

Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (9050660..9054143)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene early nodulin-like protein Neighboring gene ncRNA Neighboring gene AslB, putative (DUF239)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_122494.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
kinase family with leucine-rich repeat domain-containing protein
NP_197965.1
  • Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor like protein 52 (TAIR:AT5G25910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    9050660..9054143
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_122494.4NP_197965.1  kinase family with leucine-rich repeat domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197965.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UQ46, A0A5S9Y7D6, A0A654G460, Q9XGZ2
    Conserved Domains (4) summary
    PLN00113
    Location:30977
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00031
    Location:428439
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:113137
    LRR_RI; leucine-rich repeat [structural motif]
    cl21453
    Location:691964
    PKc_like; Protein Kinases, catalytic domain