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Ift70a2 intraflagellar transport 70A2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 311123, updated on 9-Dec-2024

Summary

Official Symbol
Ift70a2provided by RGD
Official Full Name
intraflagellar transport 70A2provided by RGD
Primary source
RGD:1560121
See related
AllianceGenome:RGD:1560121
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Ttc30a1; Ttc30a2
Summary
Predicted to enable intraciliary transport particle B binding activity. Predicted to be involved in intraciliary transport. Predicted to be part of intraciliary transport particle B. Predicted to be active in axonemal microtubule. Orthologous to human IFT70A (intraflagellar transport 70A). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See Ift70a2 in Genome Data Viewer
Location:
3q23
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (81306455..81308896, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (60899193..60901634, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (62800932..62803373, complement)

Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134486389 Neighboring gene intraflagellar transport 70B Neighboring gene intraflagellar transport 70A1 Neighboring gene phosphodiesterase 11A Neighboring gene uncharacterized LOC120101579

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC116209

Gene Ontology Provided by RGD

Process Evidence Code Pubs
involved_in intraciliary transport  
involved_in intraciliary transport  
Component Evidence Code Pubs
is_active_in axonemal microtubule  
located_in axonemal microtubule  
part_of intraciliary transport particle B  
part_of intraciliary transport particle B  

General protein information

Preferred Names
intraflagellar transport protein 70A2
Names
TPR repeat protein 30A2
tetratricopeptide repeat domain 30A1
tetratricopeptide repeat domain 30A2
tetratricopeptide repeat protein 30A2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001029918.1NP_001025089.1  intraflagellar transport protein 70A2

    See identical proteins and their annotated locations for NP_001025089.1

    Status: PROVISIONAL

    Source sequence(s)
    BC098051
    UniProtKB/Swiss-Prot
    Q4QQS2
    UniProtKB/TrEMBL
    A0A0H2UHX9, A6HMG5
    Conserved Domains (2) summary
    sd00006
    Location:4474
    TPR; TPR repeat [structural motif]
    pfam14559
    Location:2187
    TPR_19; Tetratricopeptide repeat

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086021.1 Reference GRCr8

    Range
    81306455..81308896 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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