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Items: 1 to 20 of 24

1.
Deficiency of primate-specific SSX1 induced asthenoteratozoospermia in infertile men and cynomolgus monkey and tree shrew models
Chunyu Liu, Wei Si, Chaofeng Tu, Shixiong Tian, Xiaojin He, Shengnan Wang, Xiaoyu Yang, Chencheng Yao, Cong Li, Zine-Eddine Kherraf, Maosen Ye, Zixue Zhou, Yuhua Ma, Yang Gao, Yu Li, Qiwei Liu, Shuyan Tang, Jiaxiong Wang, Hexige Saiyin, Liangyu Zhao, Liqun Yang, Lanlan Meng, Bingbing Chen, Dongdong Tang, Yiling Zhou, Huan Wu, Mingrong Lv, Chen Tan, Ge Lin, Qingpeng Kong, Hong Shi, Zhixi Su, Zheng Li, Yong-Gang Yao, Li Jin, Ping Zheng, Pierre F. Ray, Yue-Qiu Tan, Yunxia Cao, Feng Zhang
Am J Hum Genet. 2023 Mar 2; 110(3): 516–530. Published online 2023 Feb 15. doi: 10.1016/j.ajhg.2023.01.016
PMCID:
PMC10027476
AbstractArticlePDF–6.2M
2.
The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers
Martina Oravcová, Minghua Nie, Nicola Zilio, Shintaro Maeda, Yasaman Jami-Alahmadi, Eros Lazzerini-Denchi, James A Wohlschlegel, Helle D Ulrich, Takanori Otomo, Michael N Boddy
eLife. 2022; 11: e79676. Published online 2022 Nov 14. doi: 10.7554/eLife.79676
PMCID:
PMC9708086
AbstractArticlePDF–8.5M
3.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
4.
A reference map of the human binary protein interactome
Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood
Nature. Author manuscript; available in PMC 2020 Oct 8.
Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x
PMCID:
PMC7169983
AbstractArticlePDF–5.4M
5.
Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei
Domenico Fasci, Hugo van Ingen, Richard A. Scheltema, Albert J. R. Heck
Mol Cell Proteomics. 2018 Oct; 17(10): 2018–2033. Published online 2018 Jul 18. doi: 10.1074/mcp.RA118.000924
PMCID:
PMC6166682
AbstractArticlePDF–3.8M
6.
The SS18-SSX oncoprotein hijacks KDM2B-PRC1.1 to drive synovial sarcoma
Ana Banito, Xiang Li, Aimée N. Laporte, Jae-Seok Roe, Francisco Sanchez-Vega, Chun-Hao Huang, Amanda R. Dancsok, Katerina Hatzi, Chi-Chao Chen, Darjus F. Tschaharganeh, Rohit Chandwani, Nilgun Tasdemir, Kevin B. Jones, Mario R. Capecchi, Christopher R. Vakoc, Nikolaus Schultz, Marc Ladanyi, Torsten O. Nielsen, Scott W Lowe
Cancer Cell. Author manuscript; available in PMC 2019 Mar 12.
Published in final edited form as: Cancer Cell. 2018 Mar 12; 33(3): 527–541.e8. Published online 2018 Mar 1. doi: 10.1016/j.ccell.2018.01.018
Correction in:
Cancer Cell. 2018 Aug 13; 34(2): 346–348.
PMCID:
PMC5881394
AbstractArticlePDF–3.3M
7.
Identification of SHCBP1 as a novel downstream target gene of SS18-SSX1 and its functional analysis in progression of synovial sarcoma
Changliang Peng, Hui Zhao, Wei Chen, Yan Song, Xiaoying Wang, Ji Li, Yong Qiao, Dongjin Wu, Shengzhong Ma, Xiuwen Wang, Chunzheng Gao
Oncotarget. 2016 Oct 11; 7(41): 66822–66834. Published online 2016 Aug 27. doi: 10.18632/oncotarget.11651
PMCID:
PMC5341840
AbstractArticlePDF–2.0M
8.
The impact of chromosomal translocation locus and fusion oncogene coding sequence in synovial sarcomagenesis
Kevin B. Jones, Jared J. Barrott, Mingchao Xie, Malay Haldar, Huifeng Jin, Ju-Fen Zhu, Michael J. Monument, Tim L. Mosbruger, Ellen M. Langer, R. Lor Randall, Richard K. Wilson, Bradley R. Cairns, Li Ding, Mario R. Capecchi
Oncogene. Author manuscript; available in PMC 2016 Sep 23.
Published in final edited form as: Oncogene. 2016 Sep 22; 35(38): 5021–5032. Published online 2016 Mar 7. doi: 10.1038/onc.2016.38
PMCID:
PMC5014712
AbstractArticlePDF–1.2M
9.
The fusion protein SS18-SSX1 employs core Wnt pathway transcription factors to induce a partial Wnt signature in synovial sarcoma
Luisa Cironi, Tanja Petricevic, Victor Fernandes Vieira, Paolo Provero, Carlo Fusco, Sandrine Cornaz, Giulia Fregni, Igor Letovanec, Michel Aguet, Ivan Stamenkovic
Sci Rep. 2016; 6: 22113. Published online 2016 Feb 24. doi: 10.1038/srep22113
PMCID:
PMC4764983
AbstractArticlePDF–1.9M
10.
A proteome-scale map of the human interactome network
Thomas Rolland, Murat Taşan, Benoit Charloteaux, Samuel J. Pevzner, Quan Zhong, Nidhi Sahni, Song Yi, Irma Lemmens, Celia Fontanillo, Roberto Mosca, Atanas Kamburov, Susan D. Ghiassian, Xinping Yang, Lila Ghamsari, Dawit Balcha, Bridget E. Begg, Pascal Braun, Marc Brehme, Martin P. Broly, Anne-Ruxandra Carvunis, Dan Convery-Zupan, Roser Corominas, Jasmin Coulombe-Huntington, Elizabeth Dann, Matija Dreze, Amélie Dricot, Changyu Fan, Eric Franzosa, Fana Gebreab, Bryan J. Gutierrez, Madeleine F. Hardy, Mike Jin, Shuli Kang, Ruth Kiros, Guan Ning Lin, Katja Luck, Andrew MacWilliams, Jörg Menche, Ryan R. Murray, Alexandre Palagi, Matthew M. Poulin, Xavier Rambout, John Rasla, Patrick Reichert, Viviana Romero, Elien Ruyssinck, Julie M. Sahalie, Annemarie Scholz, Akash A. Shah, Amitabh Sharma, Yun Shen, Kerstin Spirohn, Stanley Tam, Alexander O. Tejeda, Shelly A. Wanamaker, Jean-Claude Twizere, Kerwin Vega, Jennifer Walsh, Michael E. Cusick, Yu Xia, Albert-László Barabási, Lilia M. Iakoucheva, Patrick Aloy, Javier De Las Rivas, Jan Tavernier, Michael A. Calderwood, David E. Hill, Tong Hao, Frederick P. Roth, Marc Vidal
Cell. Author manuscript; available in PMC 2015 Nov 20.
Published in final edited form as: Cell. 2014 Nov 20; 159(5): 1212–1226. doi: 10.1016/j.cell.2014.10.050
PMCID:
PMC4266588
AbstractArticlePDF–3.1M
11.
Loss of SS18-SSX1 Inhibits Viability and Induces Apoptosis in Synovial Sarcoma
Emily E. Carmody Soni, Silke Schlottman, Hayriye V. Erkizan, Aykut Uren, Jeffrey A. Toretsky
Clin Orthop Relat Res. 2014 Mar; 472(3): 874–882. Published online 2013 May 29. doi: 10.1007/s11999-013-3065-9
PMCID:
PMC3916608
AbstractArticlePDF–526K
12.
Truncated SSX Protein Suppresses Synovial Sarcoma Cell Proliferation by Inhibiting the Localization of SS18-SSX Fusion Protein
Yasushi Yoneda, Sachio Ito, Toshiyuki Kunisada, Yuki Morimoto, Hirotaka Kanzaki, Aki Yoshida, Kenji Shimizu, Toshifumi Ozaki, Mamoru Ouchida
PLoS One. 2013; 8(10): e77564. Published online 2013 Oct 9. doi: 10.1371/journal.pone.0077564
PMCID:
PMC3793959
AbstractArticlePDF–783K
13.
Reversible Disruption of mSWI/SNF (BAF) Complexes by the SS18-SSX Oncogenic Fusion in Synovial Sarcoma
Cigall Kadoch, Gerald R. Crabtree
Cell. Author manuscript; available in PMC 2013 May 16.
Published in final edited form as: Cell. 2013 Mar 28; 153(1): 71–85. doi: 10.1016/j.cell.2013.02.036
PMCID:
PMC3655887
AbstractArticlePDF–5.4M
14.
Testicular Synovial Sarcoma: A Case Report
Mejri Nesrine, Rym Sellami, Raoudha Doghri, Hela Rifi, Henda Raies, Amel Mezlini
Cancer Biol Med. 2012 Dec; 9(4): 274–276. doi: 10.7497/j.issn.2095-3941.2012.04.010
PMCID:
PMC3643673
AbstractArticlePDF–1.2M
15.
Recurrent and novel SS18-SSX fusion transcripts in synovial sarcoma: description of three new cases
Joanna Przybyl, Raf Sciot, Piotr Rutkowski, Janusz A. Siedlecki, Vanessa Vanspauwen, Ignace Samson, Maria Debiec-Rychter
Tumour Biol. 2012 Dec; 33(6): 2245–2253. Published online 2012 Sep 14. doi: 10.1007/s13277-012-0486-0
PMCID:
PMC3501176
AbstractArticlePDF–747K
16.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
17.
SYT-SSX1 (Synovial Sarcoma Translocated) Regulates PIASy Ligase Activity to Cause Overexpression of NCOA3 Protein
Yin Sun, Juanita Perera, Brian P. Rubin, Jiaoti Huang
J Biol Chem. 2011 May 27; 286(21): 18623–18632. Published online 2011 Mar 24. doi: 10.1074/jbc.M110.176693
PMCID:
PMC3099678
AbstractArticlePDF–1.9M
18.
Transcriptomic and genetic studies identify IL-33 as a candidate gene for Alzheimer’s disease
J Chapuis, D Hot, F Hansmannel, O Kerdraon, S Ferreira, C Hubans, CA Maurage, L Huot, F Bensemain, G Laumet, AM Ayral, N Fievet, JJ Hauw, ST DeKosky, Y Lemoine, T Iwatsubo, F Wavrant-Devrièze, JF Dartigues, C Tzourio, L Buée, F Pasquier, C Berr, D Mann, C Lendon, A Alpérovitch, MI Kamboh, P Amouyel, JC Lambert
Mol Psychiatry. Author manuscript; available in PMC 2010 Apr 28.
Published in final edited form as: Mol Psychiatry. 2009 Nov; 14(11): 1004–1016. Published online 2009 Feb 10. doi: 10.1038/mp.2009.10
PMCID:
PMC2860783
AbstractArticlePDF–1.3M
19.
An atlas of combinatorial transcriptional regulation in mouse and man
The FANTOM consortium and RIKEN Omics Science Center
Cell. Author manuscript; available in PMC 2011 Mar 5.
Published in final edited form as: Cell. 2010 Mar 5; 140(5): 744–752. doi: 10.1016/j.cell.2010.01.044
Correction in:
volume 141 on page 369
PMCID:
PMC2836267
AbstractArticlePDF–2.2M
20.
Epigenetic Features of Human Mesenchymal Stem Cells Determine Their Permissiveness for Induction of Relevant Transcriptional Changes by SYT-SSX1
Luisa Cironi, Paolo Provero, Nicola Riggi, Michalina Janiszewska, Domizio Suva, Mario-Luca Suva, Vincent Kindler, Ivan Stamenkovic
PLoS One. 2009; 4(11): e7904. Published online 2009 Nov 19. doi: 10.1371/journal.pone.0007904
PMCID:
PMC2775947
AbstractArticlePDF–1.2M

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