PMC Links for GEO Profiles (Select 109629425) - PMC

Select item 98737991.

The antidiabetic drug metformin aids bacteria in hijacking vitamin B12 from the environment through RcdA

Luxia Yao, Yihan Wang, Shenlu Qin, Shihao Zhu, Lianfeng Wu

Commun Biol. 2023; 6: 96. Published online 2023 Jan 24. doi: 10.1038/s42003-023-04475-0

PMCID:: PMC9873799

Select item 92839402.

A metabolic regulatory network for the Caenorhabditis elegans intestine

Sushila Bhattacharya, Brent B. Horowitz, Jingyan Zhang, Xuhang Li, Hefei Zhang, Gabrielle E. Giese, Amy D. Holdorf, Albertha J.M. Walhout

iScience. 2022 Aug 19; 25(8): 104688. Published online 2022 Jun 30. doi: 10.1016/j.isci.2022.104688

PMCID:: PMC9283940

Abstract Article PDF–4.7M

Select item 89484193.

Molecular physiology regulating cold tolerance and acclimation of Caenorhabditis elegans

Misaki OKAHATA, Haruka MOTOMURA, Akane OHTA, Atsushi KUHARA

Proc Jpn Acad Ser B Phys Biol Sci. 2022 Mar 11; 98(3): 126–139. doi: 10.2183/pjab.98.009

PMCID:: PMC8948419

Abstract Article PDF–954K

Select item 75613514.

Caenorhabditis elegans methionine/S-adenosylmethionine cycle activity is sensed and adjusted by a nuclear hormone receptor

Gabrielle E Giese, Melissa D Walker, Olga Ponomarova, Hefei Zhang, Xuhang Li, Gregory Minevich, Albertha JM Walhout

eLife. 2020; 9: e60259. Published online 2020 Oct 5. doi: 10.7554/eLife.60259

PMCID:: PMC7561351

Abstract Article PDF–5.8M

Select item 62165905.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 47811116.

Transcriptional regulation.

Peter G Okkema, Michael Krause

WormBook. 2005 : 1–40. Published online 2005 Dec 23. doi: 10.1895/wormbook.1.45.1

PMCID:: PMC4781111

Abstract Article

Select item 45844257.

Transcription Factor Activity Mapping of a Tissue-Specific in vivo Gene Regulatory Network

Lesley T. MacNeil, Carles Pons, H. Efsun Arda, Gabrielle E. Giese, Chad L. Myers, Albertha J.M. Walhout

Cell Syst. Author manuscript; available in PMC 2016 Aug 26.

Published in final edited form as: Cell Syst. 2015 Aug 26; 1(2): 152–162. doi: 10.1016/j.cels.2015.08.003

PMCID:: PMC4584425

Abstract Article PDF–883K

Select item 37944398.

Extensive Rewiring and Complex Evolutionary Dynamics in a C. elegans Multiparameter Transcription Factor Network

John S. Reece-Hoyes, Carles Pons, Alos Diallo, Akihiro Mori, Shaleen Shrestha, Sreenath Kadreppa, Justin Nelson, Stephanie DiPrima, Amelie Dricot, Bryan R. Lajoie, Philippe Souza Moraes Ribeiro, Matthew T. Weirauch, David E. Hill, Timothy R. Hughes, Chad L. Myers, Albertha J.M. Walhout

Mol Cell. Author manuscript; available in PMC 2013 Oct 10.

Published in final edited form as: Mol Cell. 2013 Jul 11; 51(1): 116–127. Published online 2013 Jun 20. doi: 10.1016/j.molcel.2013.05.018

PMCID:: PMC3794439

Abstract Article PDF–5.2M

Select item 36582779.

SH3 interactome conserves general function over specific form

Xiaofeng Xin, David Gfeller, Jackie Cheng, Raffi Tonikian, Lin Sun, Ailan Guo, Lianet Lopez, Alevtina Pavlenco, Adenrele Akintobi, Yingnan Zhang, Jean-François Rual, Bridget Currell, Somasekar Seshagiri, Tong Hao, Xinping Yang, Yun A Shen, Kourosh Salehi-Ashtiani, Jingjing Li, Aaron T Cheng, Dryden Bouamalay, Adrien Lugari, David E Hill, Mark L Grimes, David G Drubin, Barth D Grant, Marc Vidal, Charles Boone, Sachdev S Sidhu, Gary D Bader

Mol Syst Biol. 2013; 9: 652. Published online 2013 Apr 2. doi: 10.1038/msb.2013.9

PMCID:: PMC3658277

Abstract Article PDF–2.3M

Select item 309178610.

A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding

Nicolas Lenfant, Jolanta Polanowska, Sophie Bamps, Shizue Omi, Jean-Paul Borg, Jérôme Reboul

BMC Genomics. 2010; 11: 671. Published online 2010 Nov 26. doi: 10.1186/1471-2164-11-671

PMCID:: PMC3091786

Abstract Article PDF–1.2M

Select item 289032711.

Functional modularity of nuclear hormone receptors in a Caenorhabditis elegans metabolic gene regulatory network

H Efsun Arda, Stefan Taubert, Lesley T MacNeil, Colin C Conine, Ben Tsuda, Marc Van Gilst, Reynaldo Sequerra, Lynn Doucette-Stamm, Keith R Yamamoto, Albertha J M Walhout

Mol Syst Biol. 2010; 6: 367. Published online 2010 May 11. doi: 10.1038/msb.2010.23

PMCID:: PMC2890327

Abstract Article PDF–1.5M

Select item 270442612.

Shifted Transversal Design smart-pooling for high coverage interactome mapping

Xiaofeng Xin, Jean-François Rual, Tomoko Hirozane-Kishikawa, David E. Hill, Marc Vidal, Charles Boone, Nicolas Thierry-Mieg

Genome Res. 2009 Jul; 19(7): 1262–1269. doi: 10.1101/gr.090019.108

PMCID:: PMC2704426

Abstract Article PDF–855K

Select item 244729913.

Proteins Interacting With Caenorhabditis elegans Gα Subunits

Edwin Cuppen, Alexander M. van der Linden, Gert Jansen, Ronald H. A. Plasterk

Comp Funct Genomics. 2003 Oct; 4(5): 479–491. doi: 10.1002/cfg.318

PMCID:: PMC2447299

Summary PDF–299K

Select item 169894914.

A Map of the Interactome Network of the Metazoan C. elegans

Siming Li, Christopher M. Armstrong, Nicolas Bertin, Hui Ge, Stuart Milstein, Mike Boxem, Pierre-Olivier Vidalain, Jing-Dong J. Han, Alban Chesneau, Tong Hao, Debra S. Goldberg, Ning Li, Monica Martinez, Jean-François Rual, Philippe Lamesch, Lai Xu, Muneesh Tewari, Sharyl L. Wong, Lan V. Zhang, Gabriel F. Berriz, Laurent Jacotot, Philippe Vaglio, Jérôme Reboul, Tomoko Hirozane-Kishikawa, Qianru Li, Harrison W. Gabel, Ahmed Elewa, Bridget Baumgartner, Debra J. Rose, Haiyuan Yu, Stephanie Bosak, Reynaldo Sequerra, Andrew Fraser, Susan E. Mango, William M. Saxton, Susan Strome, Sander van den Heuvel, Fabio Piano, Jean Vandenhaute, Claude Sardet, Mark Gerstein, Lynn Doucette-Stamm, Kristin C. Gunsalus, J. Wade Harper, Michael E. Cusick, Frederick P. Roth, David E. Hill, Marc Vidal

Science. Author manuscript; available in PMC 2006 Dec 14.

Published in final edited form as: Science. 2004 Jan 23; 303(5657): 540–543. Published online 2004 Jan 2. doi: 10.1126/science.1091403

PMCID:: PMC1698949

Abstract Article PDF–1.4M

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