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60S ribosomal protein L13, putative [Entamoeba histolytica HM-1:IMSS]

NCBI Reference Sequence: XP_651269.1

Identical Proteins FASTA Graphics 

LOCUS       XP_651269                205 aa            linear   INV 16-FEB-2024
DEFINITION  60S ribosomal protein L13, putative [Entamoeba histolytica
            HM-1:IMSS].
ACCESSION   XP_651269
VERSION     XP_651269.1
DBLINK      BioProject: PRJNA19739
            BioSample: SAMN02953605
DBSOURCE    REFSEQ: accession XM_646177.2
KEYWORDS    RefSeq.
SOURCE      Entamoeba histolytica HM-1:IMSS
  ORGANISM  Entamoeba histolytica HM-1:IMSS
            Eukaryota; Amoebozoa; Evosea; Archamoebae; Mastigamoebida;
            Entamoebidae; Entamoeba.
REFERENCE   1  (residues 1 to 205)
  AUTHORS   Loftus,B., Anderson,I., Davies,R., Alsmark,U.C., Samuelson,J.,
            Amedeo,P., Roncaglia,P., Berriman,M., Hirt,R.P., Mann,B.J.,
            Nozaki,T., Suh,B., Pop,M., Duchene,M., Ackers,J., Tannich,E.,
            Leippe,M., Hofer,M., Bruchhaus,I., Willhoeft,U., Bhattacharya,A.,
            Chillingworth,T., Churcher,C., Hance,Z., Harris,B., Harris,D.,
            Jagels,K., Moule,S., Mungall,K., Ormond,D., Squares,R.,
            Whitehead,S., Quail,M.A., Rabbinowitsch,E., Norbertczak,H.,
            Price,C., Wang,Z., Guillen,N., Gilchrist,C., Stroup,S.E.,
            Bhattacharya,S., Lohia,A., Foster,P.G., Sicheritz-Ponten,T.,
            Weber,C., Singh,U., Mukherjee,C., El-Sayed,N.M., Petri,W.A. Jr.,
            Clark,C.G., Embley,T.M., Barrell,B., Fraser,C.M. and Hall,N.
  TITLE     The genome of the protist parasite Entamoeba histolytica
  JOURNAL   Nature 433 (7028), 865-868 (2005)
   PUBMED   15729342
REFERENCE   2  (residues 1 to 205)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-FEB-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 205)
  AUTHORS   Lorenzi,H., Amedeo,P., Inman,J., Schobel,S. and Caler,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAR-2007) The Institute for Genomic Research, 9712
            Medical Center Drive, Rockville, MD 20850, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to EAL45883.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Entamoeba histolytica HM-1:IMSS"
                     /strain="HM-1:IMSS"
                     /db_xref="taxon:294381"
                     /chromosome="Unknown"
     Protein         1..205
                     /product="60S ribosomal protein L13, putative"
                     /calculated_mol_wt=22999
     Region          3..205
                     /region_name="PTZ00068"
                     /note="60S ribosomal protein L13a; Provisional"
                     /db_xref="CDD:240253"
     Site            order(16,18..19,22,25,29,45,47,75..76,82..84,86..88,
                     90..92,95,97,101,104..105)
                     /site_type="other"
                     /note="23S rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238230"
     Site            76
                     /site_type="other"
                     /note="L3 interface [polypeptide binding]"
                     /db_xref="CDD:238230"
     CDS             1..205
                     /locus_tag="EHI_017700"
                     /old_locus_tag="173.t00008"
                     /coded_by="XM_646177.2:7..624"
                     /note="encoded by transcript EHI_017700A;
                     Reference: Sharma,R., Azam,A., Bhattacharya,S. and
                     Bhattacharya,A. Identification of novel genes of
                     non-pathogenic Entamoeba dispar by expressed sequence tag
                     analysis Mol. Biochem. Parasitol. 99 (2), 279-285 (1999)
                     This functional annotation is a direct result of community
                     participation in an Entamoeba Annotation Jamboree."
                     /db_xref="GeneID:3405574"
                     /db_xref="Pathema:EHI_017700"
ORIGIN      
        1 mstnnkvtvi dchghvlgrv asvvakhlll gqkfvlvrce dlqvcgtlkm rlvqwelyqr
       61 krvntnptrg afhhrspadm vrkavrgmlp knnyrgklal knlkcfegcp apydkmkkss
      121 ipeaaaiysf nptrkrtllg elgtavgwky advvakneae rkeraakwya akqlkqkava
      181 eakekilade kykakvailk kfgya
//
1..205
/locus_tag="EHI_017700"
/old_locus_tag="173.t00008"
/coded_by="XM_646177.2:7..624"
/note="encoded by transcript EHI_017700A;
Reference: Sharma,R., Azam,A., Bhattacharya,S. and
Bhattacharya,A. Identification of novel genes of
non-pathogenic Entamoeba dispar by expressed sequence tag
analysis Mol. Biochem. Parasitol. 99 (2), 279-285 (1999)
This functional annotation is a direct result of community
participation in an Entamoeba Annotation Jamboree."
/db_xref="GeneID:3405574"
/db_xref="Pathema:EHI_017700"
Feature XP_651269 : 1 segment
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