Warning: The NCBI web site requires JavaScript to function. more...
An official website of the United States government
The .gov means it's official. Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you're on a federal government site.
The site is secure. The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.
NCBI Reference Sequence: XP_017206849.1
Identical Proteins FASTA Graphics
LOCUS XP_017206849 420 aa linear VRT 08-SEP-2024 DEFINITION pre-B-cell leukemia transcription factor 2 isoform X1 [Danio rerio]. ACCESSION XP_017206849 VERSION XP_017206849.1 DBLINK BioProject: PRJNA13922 DBSOURCE REFSEQ: accession XM_017351360.3 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007127.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_000002035.6-RS_2024_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/15/2024 ##Genome-Annotation-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..420 /organism="Danio rerio" /strain="Tuebingen" /db_xref="taxon:7955" /chromosome="16" Protein 1..420 /product="pre-B-cell leukemia transcription factor 2 isoform X1" /calculated_mol_wt=46190 Region 61..251 /region_name="PBC" /note="PBC domain; pfam03792" /db_xref="CDD:461052" Region 253..313 /region_name="homeodomain" /note="Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner; cd00086" /db_xref="CDD:238039" Site order(253..257,259,279,285,298,300..301,304..305,307..309, 311..312) /site_type="DNA binding" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238039" Site order(255,258,301,304..305,308) /site_type="other" /note="specific DNA base contacts [nucleotide binding]" /db_xref="CDD:238039" CDS 1..420 /gene="pbx2" /gene_synonym="pbxy; wu:fb73g03" /coded_by="XM_017351360.3:37..1299" /db_xref="GeneID:58136" /db_xref="ZFIN:ZDB-GENE-000405-5" ORIGIN 1 mlqpqqpitg ngpsasrggg lsvhpgmhpl nsihpaaqhr pdgadpagle gtenghdnrr 61 digdilqqim titdqsldea qakkhalnch rmkpalfsvl ceikektgls mrnvqeeepp 121 dpqlvrldnm llaegvagpe kgggaaaavs aatssggmsp dsslehsdyk sklsqirniy 181 htelekyeqa cseftthvmn llreqsrtrp vspreiermv aiihrkfssi qtqlkqstce 241 avmilrsrfl darrkrrnfs kqatevlney fyshlsnpyp seeakeelak qcsitvsqvs 301 nwfgnkriry kknigkyqee anlyamktal gatqsedsph tpnstgsgsf slsgsadcfl 361 gvppmngeqp pyhmgaqdaq srfserlyit resrtngnwq eqnsppsaas pgtdhsvdsd //
Whole sequence Selected region from: to:
Conserved Domains
Your browsing activity is empty.
Activity recording is turned off.
Turn recording back on