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PREDICTED: metabotropic glutamate receptor 1-like [Pundamilia nyererei]

NCBI Reference Sequence: XP_013766679.1

Identical Proteins FASTA Graphics 

LOCUS       XP_013766679            1176 aa            linear   VRT 31-AUG-2015
DEFINITION  PREDICTED: metabotropic glutamate receptor 1-like [Pundamilia
            nyererei].
ACCESSION   XP_013766679
VERSION     XP_013766679.1
DBLINK      BioProject: PRJNA220167
DBSOURCE    REFSEQ: accession XM_013911225.1
KEYWORDS    RefSeq.
SOURCE      Pundamilia nyererei
  ORGANISM  Pundamilia nyererei
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes;
            Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini;
            Pundamilia.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_005187459.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Pundamilia nyererei Annotation
                                           Release 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 6.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1176
                     /organism="Pundamilia nyererei"
                     /isolate="P.nyererei 1_Seehausen"
                     /db_xref="taxon:303518"
                     /chromosome="Unknown"
                     /sex="female"
     Protein         1..1176
                     /product="metabotropic glutamate receptor 1-like"
                     /calculated_mol_wt=130881
     Region          46..526
                     /region_name="PBP1_mGluR_groupI"
                     /note="ligand binding domain of the group I metabotropic
                     glutamate receptor; cd06374"
                     /db_xref="CDD:380597"
     Site            order(84,175,196..198,246,328,426)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:380597"
     Site            order(123,126..127,130,134,183..184,186..188,209,252,255,
                     270)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380597"
     Region          538..588
                     /region_name="NCD3G"
                     /note="Nine Cysteines Domain of family 3 GPCR; pfam07562"
                     /db_xref="CDD:462210"
     Region          608..857
                     /region_name="7tmC_mGluR1"
                     /note="metabotropic glutamate receptor 1 in group 1,
                     member of the class C family of seven-transmembrane G
                     protein-coupled receptors; cd15449"
                     /db_xref="CDD:320565"
     Region          608..633
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320565"
     Site            order(611,614..615,618..619,621..622,656,660,663..664,672,
                     676)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:320565"
     Region          645..666
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320565"
     Site            order(665,677..678,681..682,685,765,770,773..774,777,811,
                     814..815,818,822,828..829,832,835,839)
                     /site_type="other"
                     /note="allosteric modulator binding site [chemical
                     binding]"
                     /db_xref="CDD:320565"
     Region          675..699
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320565"
     Region          723..743
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320565"
     Region          766..792
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320565"
     Region          800..823
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320565"
     Region          826..851
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320565"
     Region          1128..1176
                     /region_name="GluR_Homer-bdg"
                     /note="Homer-binding domain of metabotropic glutamate
                     receptor; pfam10606"
                     /db_xref="CDD:431390"
     CDS             1..1176
                     /gene="LOC102207311"
                     /coded_by="XM_013911225.1:235..3765"
                     /db_xref="GeneID:102207311"
ORIGIN      
        1 mwrnmacvkm gllallclpa clfrvlvlsh sssiyersvv pravsrsvar mdgdviigal
       61 fsvhhqpsae kvaerkcgdv reqygiqrve amfhtldrin adpnllpnis lgceirdscw
      121 hssvaleqsi efirdslisi rddkdgskwc idgtpsnqpp pskkpiagvi gpgsssvaiq
      181 vqnllqlfni pqiaysatsi dlsdktlfky flrvvpsdtl qaramldivk hynwtyvsav
      241 htegnygesg meafkelasq eglciahsdk iysnagekhy drllrklrer lpkarvvvcf
      301 cegmtvrgll mamrrlgvyg efllvgsdgw adryevvegy eqeaeggitm klqsavvrsf
      361 ddyylklrld sntrnpwfpe fwqyrfqcrl pghpqekkny kkvcsgdhdl rggneslqen
      421 yvqdskmgfv inaiyamahg lhdmhkelcp gqtglceamd pidgsklldy llktsfrgvs
      481 geeiyfdeng dtpgrydimn lqsvgddryd yinvgswseg ilsiddnklw mnssdmvrsv
      541 csepcskgqi kvirkgevsc cwicttckdn eyvqdeftck acelgwwpdd dlavcqplpl
      601 kyldwadves ivavvfscvg ilitsfvtfv fiqyrdtpvv ksssrelcyi ilagiflgyi
      661 cpftliarpt vascylqrll vglssamcys alvtktnria rilagskkki ctrkprfmsa
      721 waqviiafml isvqltleit liileppepi ksypsirevy licntsnvgm vaplgyngll
      781 imsctyyafk trnvpanfne akyiaftmyt tciiwlafvp iyfgsnykii ttsfsvslsv
      841 tvalgcmftp kmyiiiakpe rnvrsaftts dvvrmhvgdg ksaaqstsns flnmfrrkkt
      901 vtgnansngk svswsesgpr hpprggnvwh rlsvhvrkqe aglnqtavir pltntpdphs
      961 cepstcntgt asqdpppepp gtkplynlte eddegdaqrp lwtptstdrl rgresdldep
     1021 asllpshltg httdrlhrdv vdthsshapa lndrtakeam paneplsltp shlpsapqhg
     1081 afaeeglede eldllhgyiy dakeegered gegedliqnk atledslals ppspfrdsvy
     1141 sgdsvtgspi idsmlgspsv ytadilrdya hssstl
//
1..1176
/gene="LOC102207311"
/coded_by="XM_013911225.1:235..3765"
/db_xref="GeneID:102207311"
Feature XP_013766679 : 1 segment
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