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nitrate transporter [Thalassiosira pseudonana CCMP1335]

NCBI Reference Sequence: XP_002295904.1

Identical Proteins FASTA Graphics 

LOCUS       XP_002295904             489 aa            linear   PLN 16-JUN-2017
DEFINITION  nitrate transporter [Thalassiosira pseudonana CCMP1335].
ACCESSION   XP_002295904
VERSION     XP_002295904.1
DBLINK      BioProject: PRJNA34119
DBSOURCE    REFSEQ: accession XM_002295868.1
KEYWORDS    RefSeq.
SOURCE      Thalassiosira pseudonana CCMP1335
  ORGANISM  Thalassiosira pseudonana CCMP1335
            Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
            Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
            Thalassiosiraceae; Thalassiosira.
REFERENCE   1  (residues 1 to 489)
  AUTHORS   Bowler,C., Allen,A.E., Badger,J.H., Grimwood,J., Jabbari,K.,
            Kuo,A., Maheswari,U., Martens,C., Maumus,F., Otillar,R.P.,
            Rayko,E., Salamov,A., Vandepoele,K., Beszteri,B., Gruber,A.,
            Heijde,M., Katinka,M., Mock,T., Valentin,K., Verret,F.,
            Berges,J.A., Brownlee,C., Cadoret,J.P., Chiovitti,A., Choi,C.J.,
            Coesel,S., De Martino,A., Detter,J.C., Durkin,C., Falciatore,A.,
            Fournet,J., Haruta,M., Huysman,M.J., Jenkins,B.D., Jiroutova,K.,
            Jorgensen,R.E., Joubert,Y., Kaplan,A., Kroger,N., Kroth,P.G., La
            Roche,J., Lindquist,E., Lommer,M., Martin-Jezequel,V., Lopez,P.J.,
            Lucas,S., Mangogna,M., McGinnis,K., Medlin,L.K., Montsant,A.,
            Oudot-Le Secq,M.P., Napoli,C., Obornik,M., Parker,M.S., Petit,J.L.,
            Porcel,B.M., Poulsen,N., Robison,M., Rychlewski,L., Rynearson,T.A.,
            Schmutz,J., Shapiro,H., Siaut,M., Stanley,M., Sussman,M.R.,
            Taylor,A.R., Vardi,A., von Dassow,P., Vyverman,W., Willis,A.,
            Wyrwicz,L.S., Rokhsar,D.S., Weissenbach,J., Armbrust,E.V.,
            Green,B.R., Van de Peer,Y. and Grigoriev,I.V.
  TITLE     The Phaeodactylum genome reveals the evolutionary history of diatom
            genomes
  JOURNAL   Nature 456 (7219), 239-244 (2008)
   PUBMED   18923393
REFERENCE   2  (residues 1 to 489)
  AUTHORS   Armbrust,E.V., Berges,J.A., Bowler,C., Green,B.R., Martinez,D.,
            Putnam,N.H., Zhou,S., Allen,A.E., Apt,K.E., Bechner,M.,
            Brzezinski,M.A., Chaal,B.K., Chiovitti,A., Davis,A.K.,
            Demarest,M.S., Detter,J.C., Glavina,T., Goodstein,D., Hadi,M.Z.,
            Hellsten,U., Hildebrand,M., Jenkins,B.D., Jurka,J., Kapitonov,V.V.,
            Kroger,N., Lau,W.W., Lane,T.W., Larimer,F.W., Lippmeier,J.C.,
            Lucas,S., Medina,M., Montsant,A., Obornik,M., Parker,M.S.,
            Palenik,B., Pazour,G.J., Richardson,P.M., Rynearson,T.A.,
            Saito,M.A., Schwartz,D.C., Thamatrakoln,K., Valentin,K., Vardi,A.,
            Wilkerson,F.P. and Rokhsar,D.S.
  TITLE     The genome of the diatom Thalassiosira pseudonana: ecology,
            evolution, and metabolism
  JOURNAL   Science 306 (5693), 79-86 (2004)
   PUBMED   15459382
REFERENCE   3  (residues 1 to 489)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JUN-2017) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   4  (residues 1 to 489)
  AUTHORS   Grigoriev,I., Grimwood,J., Kuo,A., Otillar,R.P., Salamov,A.,
            Detter,J.C., Schmutz,J., Lindquist,E., Shapiro,H., Lucas,S.,
            Glavina del Rio,T., Bruce,D., Pitluck,S., Rokhsar,D. and
            Armbrust,V.
  CONSRTM   Diatom Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (18-SEP-2008) US DOE Joint Genome Institute, 2800
            Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to ACI64621.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Thalassiosira pseudonana CCMP1335"
                     /strain="CCMP1335"
                     /db_xref="taxon:296543"
                     /chromosome="7"
     Protein         1..489
                     /product="nitrate transporter"
                     /calculated_mol_wt=52204
     Region          7..461
                     /region_name="PLN00028"
                     /note="nitrate transmembrane transporter; Provisional"
                     /db_xref="CDD:177665"
     CDS             1..489
                     /gene="NRT2"
                     /locus_tag="THAPS_269274"
                     /coded_by="XM_002295868.1:74..1543"
                     /note="Strong hits.EST data."
                     /db_xref="GeneID:7450676"
ORIGIN      
        1 mssavssgqa eikkyqeyfi kvdpdqddka teikllsfkr phmrafhcsw icfftaffiw
       61 faiaplmsev qltlglskqq iwtsnicsva gtivmrfing plcdkygari lmgvvlfaas
      121 ipcaltglvn datslsilrf figlggstfv mcqywtsrmf tkevagtana ivggwgnlgg
      181 gvtqlvmgsv lfplfklgms aeqawrtvcv vpaivgmiag ivtvkvsdda pkgnysemkk
      241 ngtmpevsaa asfrggamnf ntwllffqya ccfgveltmn naaasyfktk felttesaaa
      301 iasifgwmnl farglggfvs dkanakmgmr grlawqtlcl vmegvmvfif antnslglai
      361 fimvifssfv qaaegstygi vpyvnppctg sisgivgagg nvgavcfglg frqletkqaf
      421 vlmascivvs gvisalifik ghaglftgqd sdeviaaykk aggavpttlq vpepdaevaa
      481 kieddeeea
//
1..489
/gene="NRT2"
/locus_tag="THAPS_269274"
/coded_by="XM_002295868.1:74..1543"
/note="Strong hits.EST data."
/db_xref="GeneID:7450676"
Feature XP_002295904 : 1 segment
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Protein clusters for XP_002295904.1

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