LOCUS XP_002295904 489 aa linear PLN 16-JUN-2017
DEFINITION nitrate transporter [Thalassiosira pseudonana CCMP1335].
ACCESSION XP_002295904
VERSION XP_002295904.1
DBLINK BioProject: PRJNA34119
DBSOURCE REFSEQ: accession XM_002295868.1
KEYWORDS RefSeq.
SOURCE Thalassiosira pseudonana CCMP1335
ORGANISM Thalassiosira pseudonana CCMP1335
Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
Thalassiosiraceae; Thalassiosira.
REFERENCE 1 (residues 1 to 489)
AUTHORS Bowler,C., Allen,A.E., Badger,J.H., Grimwood,J., Jabbari,K.,
Kuo,A., Maheswari,U., Martens,C., Maumus,F., Otillar,R.P.,
Rayko,E., Salamov,A., Vandepoele,K., Beszteri,B., Gruber,A.,
Heijde,M., Katinka,M., Mock,T., Valentin,K., Verret,F.,
Berges,J.A., Brownlee,C., Cadoret,J.P., Chiovitti,A., Choi,C.J.,
Coesel,S., De Martino,A., Detter,J.C., Durkin,C., Falciatore,A.,
Fournet,J., Haruta,M., Huysman,M.J., Jenkins,B.D., Jiroutova,K.,
Jorgensen,R.E., Joubert,Y., Kaplan,A., Kroger,N., Kroth,P.G., La
Roche,J., Lindquist,E., Lommer,M., Martin-Jezequel,V., Lopez,P.J.,
Lucas,S., Mangogna,M., McGinnis,K., Medlin,L.K., Montsant,A.,
Oudot-Le Secq,M.P., Napoli,C., Obornik,M., Parker,M.S., Petit,J.L.,
Porcel,B.M., Poulsen,N., Robison,M., Rychlewski,L., Rynearson,T.A.,
Schmutz,J., Shapiro,H., Siaut,M., Stanley,M., Sussman,M.R.,
Taylor,A.R., Vardi,A., von Dassow,P., Vyverman,W., Willis,A.,
Wyrwicz,L.S., Rokhsar,D.S., Weissenbach,J., Armbrust,E.V.,
Green,B.R., Van de Peer,Y. and Grigoriev,I.V.
TITLE The Phaeodactylum genome reveals the evolutionary history of diatom
genomes
JOURNAL Nature 456 (7219), 239-244 (2008)
PUBMED 18923393
REFERENCE 2 (residues 1 to 489)
AUTHORS Armbrust,E.V., Berges,J.A., Bowler,C., Green,B.R., Martinez,D.,
Putnam,N.H., Zhou,S., Allen,A.E., Apt,K.E., Bechner,M.,
Brzezinski,M.A., Chaal,B.K., Chiovitti,A., Davis,A.K.,
Demarest,M.S., Detter,J.C., Glavina,T., Goodstein,D., Hadi,M.Z.,
Hellsten,U., Hildebrand,M., Jenkins,B.D., Jurka,J., Kapitonov,V.V.,
Kroger,N., Lau,W.W., Lane,T.W., Larimer,F.W., Lippmeier,J.C.,
Lucas,S., Medina,M., Montsant,A., Obornik,M., Parker,M.S.,
Palenik,B., Pazour,G.J., Richardson,P.M., Rynearson,T.A.,
Saito,M.A., Schwartz,D.C., Thamatrakoln,K., Valentin,K., Vardi,A.,
Wilkerson,F.P. and Rokhsar,D.S.
TITLE The genome of the diatom Thalassiosira pseudonana: ecology,
evolution, and metabolism
JOURNAL Science 306 (5693), 79-86 (2004)
PUBMED 15459382
REFERENCE 3 (residues 1 to 489)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (15-JUN-2017) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 4 (residues 1 to 489)
AUTHORS Grigoriev,I., Grimwood,J., Kuo,A., Otillar,R.P., Salamov,A.,
Detter,J.C., Schmutz,J., Lindquist,E., Shapiro,H., Lucas,S.,
Glavina del Rio,T., Bruce,D., Pitluck,S., Rokhsar,D. and
Armbrust,V.
CONSRTM Diatom Consortium
TITLE Direct Submission
JOURNAL Submitted (18-SEP-2008) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to ACI64621.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..489
/organism="Thalassiosira pseudonana CCMP1335"
/strain="CCMP1335"
/db_xref="taxon:296543"
/chromosome="7"
Protein 1..489
/product="nitrate transporter"
/calculated_mol_wt=52204
Region 7..461
/region_name="PLN00028"
/note="nitrate transmembrane transporter; Provisional"
/db_xref="CDD:177665"
CDS 1..489
/gene="NRT2"
/locus_tag="THAPS_269274"
/coded_by="XM_002295868.1:74..1543"
/note="Strong hits.EST data."
/db_xref="GeneID:7450676"
ORIGIN
1 mssavssgqa eikkyqeyfi kvdpdqddka teikllsfkr phmrafhcsw icfftaffiw
61 faiaplmsev qltlglskqq iwtsnicsva gtivmrfing plcdkygari lmgvvlfaas
121 ipcaltglvn datslsilrf figlggstfv mcqywtsrmf tkevagtana ivggwgnlgg
181 gvtqlvmgsv lfplfklgms aeqawrtvcv vpaivgmiag ivtvkvsdda pkgnysemkk
241 ngtmpevsaa asfrggamnf ntwllffqya ccfgveltmn naaasyfktk felttesaaa
301 iasifgwmnl farglggfvs dkanakmgmr grlawqtlcl vmegvmvfif antnslglai
361 fimvifssfv qaaegstygi vpyvnppctg sisgivgagg nvgavcfglg frqletkqaf
421 vlmascivvs gvisalifik ghaglftgqd sdeviaaykk aggavpttlq vpepdaevaa
481 kieddeeea
//