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NCBI Reference Sequence: XM_054349705.1
FASTA Graphics
LOCUS XM_054349705 2263 bp mRNA linear PRI 26-AUG-2024 DEFINITION PREDICTED: Homo sapiens IQ motif containing M (IQCM), transcript variant X3, mRNA. ACCESSION XM_054349705 VERSION XM_054349705.1 DBLINK BioProject: PRJNA807723 KEYWORDS RefSeq; includes ab initio. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_060928) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_009914755.1-RS_2024_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; RefSeqFE; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/23/2024 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..2263 /organism="Homo sapiens" /mol_type="mRNA" /isolate="CHM13" /db_xref="taxon:9606" /chromosome="4" /sex="female" /cell_line="CHM13htert" /tissue_type="hydatidiform mole" /note="haploid cell line" gene 1..2263 /gene="IQCM" /note="IQ motif containing M; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 13 long SRA reads, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns" /db_xref="GeneID:285423" /db_xref="HGNC:HGNC:53443" CDS 477..2021 /gene="IQCM" /codon_start=1 /product="IQ domain-containing protein M isoform X1" /protein_id="XP_054205680.1" /db_xref="GeneID:285423" /db_xref="HGNC:HGNC:53443" /translation="MTTEEAMPEKAKCPTLEITKQDFFQEAKTLIAQHYEKINENKVQ GTSINVFRKKHQKPKSGKYIPLEIDKKVTRDVVQEHRAALRRICFPKELSKSEHLQEP PQRISFKEPHIFSRRERCRPIDLITKGQVKLDKIMTIIEPVSKKMETAKQQHFEESRN RMLELLYPFPVHLYLQPGTSNLELLKEPDKAFYDWRGFVLTRSFRLACDSRRVSFSQS SSIFRDYYSIVCSWHINMLLIFKTFKTLIKKERQPIKPEPKSQPRIKGTPNKTDKLDS KVKRIGPHIEIFQVFRERKKFMITPKLIRMVTVMQAHVRGWLERKRLQRVMTKALDHG PDMKAVINMYGRLIHRVRYRRGLWRTRQILNLAELEEWMDRKKFYEIMFAKREDWPKI ERNELPNFFSDCGHFPTQKQVDDTWDLVHQDGKEKYSELIKKSKAIEMLFTLYPPEGA HVPDSTLLKSTWLRPIVNGEEGYRYIVNGHPALKRANIRVVGKLVARSIRERKMRQHY KSCKVE" ORIGIN 1 aaagaagaca ggcatatgtg agaagaagca atcagaagat tggcaggatt taggaatcta 61 tttgaaatat tcattaccta ttttgaattg gtcttaaaaa tttaaagaaa tataaagctg 121 gataattaaa gataaataat aaaggaagaa tacaaggttt ctatgctgtg aagcaactga 181 gattattatg attttggggc agtgaatttg tttctagaag ttttgttgga actaaggcag 241 aaaggaagaa gaacaaatga ccttggaatg aaaaacttta aggaaatatt tacgcatagg 301 gattgcaatt attcaaaaat cattttaact tgtcatgtta atgataagag tgatgatcag 361 caaagttact ccacctaacc actatgaatg atagtcttgt ctcaccaacc ccagcccatc 421 atctgttgga cttggagctc acactttaaa aaagaagatc attctaactg cccctcatga 481 ctactgaaga ggctatgcct gaaaaagcaa aatgtcctac attagagatc accaagcaag 541 acttttttca agaagcaaaa actctcattg cccaacatta tgagaaaata aatgagaata 601 aagttcaagg tacttctata aatgttttta gaaagaaaca ccaaaaaccg aaatctggca 661 aatacatacc tttggagatt gacaaaaagg taacacgtga tgtggtgcaa gaacatcggg 721 ccgcactcag aaggatttgc tttcccaagg agctttccaa aagcgagcat cttcaggaac 781 ccccacaacg aatctccttc aaggaaccac acatttttag tagaagagaa agatgcaggc 841 ccatagatct aattacaaaa ggacaagtta aattggataa aatcatgact attattgaac 901 cagtgagtaa aaaaatggag acagcaaagc aacagcactt tgaggagtcc agaaacagaa 961 tgttggaatt actctatccc tttcctgtcc atctttactt acaacctggg acctctaact 1021 tggaacttct gaaagaacct gacaaagcat tctatgactg gagaggattt gtgctgacaa 1081 ggtctttccg tttggcttgt gactcccgtc gagttagttt ctctcaatca tcatcaatat 1141 ttcgggatta ttattctatt gtttgcagtt ggcatataaa catgctactg attttcaaaa 1201 cctttaaaac ccttattaaa aaggagcgac aacctatcaa gccagaacca aaatcacaac 1261 ccaggataaa aggtactcca aataaaactg ataaacttga cagtaaagtt aaaagaattg 1321 gaccacacat agaaatcttc caagtgttcc gagaaagaaa aaaattcatg attaccccaa 1381 aattgattag aatggtcacc gtcatgcagg cacatgtcag gggatggctt gaacggaaaa 1441 gattgcaaag agtaatgacc aaggctttgg atcatggacc agatatgaaa gcagttatta 1501 acatgtatgg cagactaatc caccgtgtta gatatcgacg tggtctttgg aggacaagac 1561 aaattctcaa cttagcagag ctagaggagt ggatggaccg aaaaaaattc tatgaaataa 1621 tgtttgctaa gagggaagat tggccaaaaa ttgaaagaaa tgagctcccc aatttcttca 1681 gtgactgtgg tcatttccca actcagaaac aagttgatga tacttgggac ctggtccatc 1741 aagatggcaa agaaaaatat tctgaactaa tcaaaaagtc caaagcaatt gaaatgttat 1801 ttacactcta tcctcctgaa ggtgcacatg tgcctgacag tacactactc aagtcgactt 1861 ggttgagacc catagtaaat ggggaagaag gttatagata tatagtaaat ggacatccag 1921 cactcaaacg agctaacatc cgggttgttg gaaagttggt ggcccgatcc ataagagaaa 1981 ggaaaatgag acaacattat aagtcatgta aagttgaatg atgtttccaa catattatta 2041 cctgtaatag ttaaacttct ctacccaaag agacaagtta acactggagg tggatcaatt 2101 ctgtatgagt aggaagaaag gataaaaatc tttgaatata gaaagaactt tgacaagttt 2161 atctataatt tctagtattt ttggatgaac accattcatt tgatctcctt cataaaaaac 2221 atctctttta tcataatgaa gtaaacctgc agagtgtcaa gta //
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