Warning: The NCBI web site requires JavaScript to function. more...
An official website of the United States government
The .gov means it's official. Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you're on a federal government site.
The site is secure. The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.
Download features.
Download gene features.
NCBI Reference Sequence: XM_054345621.1
FASTA Graphics
LOCUS XM_054345621 4066 bp mRNA linear PRI 26-AUG-2024 DEFINITION PREDICTED: Homo sapiens ADP ribosylation factor like GTPase 13B (ARL13B), transcript variant X1, mRNA. ACCESSION XM_054345621 VERSION XM_054345621.1 DBLINK BioProject: PRJNA807723 KEYWORDS RefSeq; includes ab initio. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_060927) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_009914755.1-RS_2024_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; RefSeqFE; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/23/2024 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 19% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..4066 /organism="Homo sapiens" /mol_type="mRNA" /isolate="CHM13" /db_xref="taxon:9606" /chromosome="3" /sex="female" /cell_line="CHM13htert" /tissue_type="hydatidiform mole" /note="haploid cell line" gene 1..4066 /gene="ARL13B" /gene_synonym="ARL2L1; JBTS8" /note="ADP ribosylation factor like GTPase 13B; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 314 long SRA reads, 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns" /db_xref="GeneID:200894" /db_xref="HGNC:HGNC:25419" /db_xref="MIM:608922" CDS 401..1651 /gene="ARL13B" /gene_synonym="ARL2L1; JBTS8" /codon_start=1 /product="ADP-ribosylation factor-like protein 13B isoform X1" /protein_id="XP_054201596.1" /db_xref="GeneID:200894" /db_xref="HGNC:HGNC:25419" /db_xref="MIM:608922" /translation="MLVKPQQQRESKESMEKLSSAKLVPGAADLKEYPEDVAPTVGFS KINLRQGKFEVTIFDLGGGIRIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEM LRHPRISGKPILVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAISGYG KKIDKSIKKGLYWLLHVIARDFDALNERIQKETTEQRALEEQEKQERAERVRKLREER KQNEQEQAELDGTSGLAELDPEPTNPFQPIASVIIENEGKLEREKKNQKMEKDSDGCH LKHKMEHEQIETQGQVNHNGQKNNEFGLVENYKEALTQQLKNEDETDRPSLESANGKK KTKKLRMKRNHRVEPLNIDDCAPESPTPPPPPPPVGWGTPKVTRLPKLEPLGETHHND FYRKPLPPLAVPQRPNSDAHDVIS" ORIGIN 1 gcttttcttt agccgggtcc cgctaactcg gctacggtgt atctgcgtct ttggtcaggt 61 tgttccttgg ctaagagggc agtcgtcgcg gacccacgcg gttagcaagg cttagtgctc 121 gggccggccg ccttcacttc cctcccggct tttcctcccg acttatccac tttaggggcg 181 tctcggagtg ccggaggccc ccggggaaga gcggggtgcc ggtgtccgct ccgggctcgg 241 atgggaagtg gtgggaggag cgacccggga tgttcagtct gatggccagt tgctgcggct 301 ggttcaagcg gtggcgggag cctgtcaggt tggagtctcc tcggttttag tttcttcgtt 361 ttctgcagaa aggtgactct tttgatggtg ggacttgata atgctggtaa aaccgcaaca 421 gcaaagggaa tccaaggagt ccatggaaaa attgtcttct gcaaaactgg tccctggtgc 481 tgctgatcta aaggaatacc ctgaagatgt agctcctact gttggatttt caaaaattaa 541 ccttagacaa ggaaagtttg aagtcaccat ctttgacttg ggaggtggaa taagaattcg 601 gggaatctgg aagaattact atgctgaatc ctatggggta atatttgttg tggattccag 661 tgatgaagag agaatggaag agacaaaaga ggctatgtca gaaatgctaa gacatcctag 721 gatatcggga aagcctatat tggtgttggc aaataaacaa gataaagaag gagctttagg 781 agaagctgat gtcattgaat gtctatctct ggaaaaattg gtcaatgagc acaagtgcct 841 gtgtcagata gaaccatgtt cagcaatctc ggggtatgga aagaaaattg acaagtccat 901 taaaaaaggc ctttattggc tgctacatgt tattgcaaga gactttgatg ccttaaatga 961 acgcatccaa aaagagacaa cagagcagcg tgctcttgag gaacaagaga aacaagaaag 1021 agctgaacga gtgcgaaaat tacgagaaga aagaaaacaa aatgaacagg agcaggctga 1081 actcgatgga accagtggtc tggctgagtt ggacccagaa ccaacgaatc ctttccagcc 1141 aatagcatct gtaatcattg agaatgaagg aaaacttgaa agagagaaaa aaaaccaaaa 1201 aatggagaaa gacagtgatg gctgccacct gaaacataaa atggagcatg agcaaataga 1261 gacacaaggc caggttaatc acaatggcca aaaaaataat gaatttggac tagtagaaaa 1321 ttataaggag gcattaacac agcagttaaa gaatgaagat gagacagacc ggccatcatt 1381 ggaatcagct aatggtaaaa agaaaactaa gaaactaaga atgaaaagga accaccgggt 1441 agaaccactt aatatagatg actgtgctcc tgagagtcca acgccacccc caccccctcc 1501 tcctgttggc tggggaaccc ctaaagtcac tagacttcca aaacttgagc ctcttggtga 1561 aacacatcat aatgatttct ataggaagcc actgcctccc ctggctgtgc cacagcgacc 1621 taacagtgat gctcatgatg tgatctcata aacaagacgt atggaggagt tctcttaata 1681 tcagcaaggt gaactgggac attcttcttt ctcagaagaa gaaacatctt gtaaattgat 1741 gactggggca agataaccat aataatttta gtgagaagat taatactcaa ggacctgact 1801 tgataattac ttatttgtgt ttttcatggt taaaaaaata aaagaagcac aatgaccagt 1861 acatgaaatc agcatttgga ccaaattagc aagatttact gttgactctg gtttatacat 1921 ccccactcat gagcatactt ctgaaggaaa actttacaaa aagagccaat ggactcagca 1981 ctttctttac tatttgttca atagcctata tttctagata ttaaatattt tttgtaagat 2041 atatgcacat agaaggggga cttctaggaa tttataacca aaattttaaa actattttta 2101 tattttttta aatctttaaa aattttaatt actgtgatat tgattataca ccttttttat 2161 agatgatttg tttaaattat atctggaaaa tagagttgat ttactttcag acatgaacta 2221 tacaaacagg atatatttat atggcttgag gtatgttttg taatagcgtt gttctttaag 2281 tgtacatcgt aatttgacct aatttaaaaa taatatattt tcgaagtagt agattctcag 2341 atctttattc taacaattac atgatttgaa aacagtactc aatgagactg gaaatacctt 2401 ttgtacctaa atgtttttta aattaatcaa aatacattct gtgagatact attaaaagtc 2461 tcagtaaagt cctattttaa aggttagaca ctttcagaga tcaaggtgct ccctatactc 2521 ccttgttcca tcagaagctg cagtgactct tttaggtgat tctaattctt tcatgccttg 2581 aaattaaact atgaaattaa aggcagaaaa actggaaaac ctactgcagg tccagagact 2641 tctgttttac aactgggaaa cagcttgtgt actaaagtaa tgagaataaa aatgttggcc 2701 caaaattact tttataaata aataattcca aaataatttc ttaatttaaa atgatagcac 2761 ttctcttgca cttaagaatg gcatccataa gattctgtat ttggcattta gactaacttc 2821 tagatgtata tttttaataa tagattcata atgttacatt taattgaaaa caaaccttta 2881 tatccaatga aaatagtata aacagaatga tttttatacc accttgttaa gattggtgct 2941 tttggtaact tgtactgaca caacagacat gtgctagtat ctgataacat taagtacatt 3001 ttatgtcgtt taatataatt atttacttta aaaattgtac ttcagaacat cagattttat 3061 tcacattttt taactcactg aactttaata atcaggtcac ctgtactcta gtcagcactg 3121 tatatattct tggagtttgt acatgggact tagcaaccac actgagtgag gtaaaagcat 3181 ttgatttcag atctaaaatt cgtaacaacc taaatttgag aggtggctga aatgtgatga 3241 aaagcaatac gaaaagacaa tgtaaacttt gaaaaggatt ttagagggaa aattgcatag 3301 ctttttgtaa catttactta attttaaaac taaactcata cttttgctat ctttttaata 3361 tttatctcgt ttgggagtat acgtgttttt aaaatttgtg ttttctatct gtttactata 3421 gtgtagctac tggcttcatt taataaaaat aaatgatttt gaaattaaat ataatataga 3481 attcacattt tatatagctc tctcaaaaat taatttttat tccttaagca ttttaaaaac 3541 attttaaaaa atgttttgta aatccaggtg tattttaaca attaaatgcc tattttgtta 3601 tatgttatac ttttattctt aattctgaat tttgacattt tcacacaata aaaataattt 3661 atatcaatat tctgtttctc ttttcaattg gtagatttaa atgatttcct ttgggtaata 3721 aaataggtaa agattttaaa atatgattat tgaaaaacag tttaaatcag tagattaaaa 3781 taatgcattt ttttgatact ttacacacaa aacttttttc tctctgcaag tttttatgta 3841 tgtgggaaag aatttgtgat tttaaatgca gctacaaata gcatttcacc atatgatgtt 3901 agaggatttg atgtctgtct tgcgttaaag ctgttggtca acagatatgt ttttatgtat 3961 ttaaaagagg ctcttgtgtg cctttatgtg taaaatgcat attacgtagt atacatgata 4021 ttgtatgtaa ctgacttcaa atataaaact atgcatagaa acaaca //
Whole sequence Selected region from: to:
All features Gene, RNA, and CDS features only
SNP
Show sequence Show reverse complement Show gap features
Your browsing activity is empty.
Activity recording is turned off.
Turn recording back on