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NCBI Reference Sequence: XM_002311738.4
FASTA Graphics
LOCUS XM_002311738 1337 bp mRNA linear PLN 08-DEC-2022 DEFINITION PREDICTED: Populus trichocarpa galactinol synthase 1 (LOC7473221), mRNA. ACCESSION XM_002311738 VERSION XM_002311738.4 DBLINK BioProject: PRJNA17973 KEYWORDS RefSeq. SOURCE Populus trichocarpa (Populus balsamifera subsp. trichocarpa) ORGANISM Populus trichocarpa Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037292) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 8, 2022 this sequence version replaced XM_002311738.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1337 /organism="Populus trichocarpa" /mol_type="mRNA" /isolate="Nisqually-1" /db_xref="taxon:3694" /chromosome="8" gene 1..1337 /gene="LOC7473221" /note="galactinol synthase 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 80 ESTs, 29 Proteins" /db_xref="GeneID:7473221" CDS 174..1190 /gene="LOC7473221" /codon_start=1 /product="galactinol synthase 1" /protein_id="XP_002311774.1" /db_xref="GeneID:7473221" /translation="MAPGVPIDGNILGTGKVSTVNTGYSKRAYVTFLAGNGDYVKGVV GLAKGLRKVKSAYPLVVAILPDVPEEHRDILRSQGCIVREIEPIYPPENQIQFAMAYY VINYSKLRIWNFEEYSKMIYLDADIQVFENIDHLFDTQDGYFYAVMDCFCEKTWSHSP QYSVGYCQQCPEKITWPAEMGSPPPLYFNAGMFVFEPSRLTYESLLERLQITPPTPFA EQDFLNMFFQKTYKPIPLLYNLVLAMLWRHPENVEVEKVKVVHYCAAGSKPWRYTGEE ANMDREDIKMLVAKWWDIYNDESLDFNGENSVPEEETIFSRSSILSSMPEPAISYVPA PTAA" polyA_site 1337 /gene="LOC7473221" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttgaagaact caggactaaa aaggatggta gagtagcatc cttagcgttg ctggtttact 61 ttcctaacaa tcctcaaaac cattcttctt agactctcta tacattccaa ataaccaaat 121 ttgtactgta tagatatata gtctacgtca agcttaaata aatcctcatt aacatggccc 181 caggagtgcc tatagatggg aatattttgg gtaccgggaa ggtttccaca gttaacactg 241 gctattctaa gagggcctac gtgacatttt tagccggcaa cggggattat gttaaagggg 301 tagttgggtt ggctaagggt ttgcgcaagg tgaagagtgc ataccctctt gtcgtagcaa 361 tcttgccgga tgtgcccgag gaacaccgtg acattttgag gtctcaaggt tgcattgttc 421 gtgagatcga gcctatttat ccacctgaga accagattca gtttgccatg gcctactacg 481 tgatcaacta ctccaagctc cgaatttgga attttgagga gtacagcaag atgatatatt 541 tggatgctga tatccaagtg ttcgagaata tagaccatct atttgacacc caagatggct 601 acttctacgc cgtgatggac tgcttctgtg agaaaacatg gagccactcc cctcaatact 661 ccgtcggcta ctgccagcag tgcccggaaa agataacatg gcctgctgag atgggctctc 721 ctcctcccct gtacttcaat gctgggatgt ttgtatttga gcctagtcgt ttgacttatg 781 agagccttct tgagaggctg cagatcaccc caccaacccc ctttgccgag caagatttct 841 tgaatatgtt tttccaaaaa acatacaagc caatccctct gctttacaac ctggttttag 901 ccatgttatg gcgacatcct gagaacgtgg aggtcgagaa ggttaaagtg gttcactact 961 gtgctgctgg ttcaaaacct tggagatata ctggcgagga agctaacatg gatagagagg 1021 acatcaagat gttagtggca aaatggtggg atatatataa tgatgagtcc ctcgatttca 1081 atggcgaaaa ctcagttcca gaagaagaaa caatattctc gaggtcatcc atcttgtctt 1141 ccatgcctga gcctgccata tcctacgtcc ctgcaccaac tgctgcttaa aacttcttag 1201 ttaagagagt ttaaaatcaa tcttgtcttt cattatatac ctttttcagg ctacttcgcc 1261 tgagtatttt cgtgttctgt gcaagatata taccatggta atatataaag tattacagta 1321 tttgaacttt tatacta //
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