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MAG: DEAD/DEAH box helicase [Erysipelotrichales bacterium]

GenBank: TFG84104.1

Identical Proteins FASTA Graphics 

LOCUS       TFG84104                 453 aa            linear   ENV 30-MAR-2019
DEFINITION  MAG: DEAD/DEAH box helicase [Erysipelotrichales bacterium].
ACCESSION   TFG84104
VERSION     TFG84104.1
DBLINK      BioProject: PRJNA511814
            BioSample: SAMN11127081
DBSOURCE    accession SPCI01000001.1
KEYWORDS    ENV; Metagenome Assembled Genome; MAG.
SOURCE      Erysipelotrichales bacterium (marine sediment metagenome)
  ORGANISM  Erysipelotrichales bacterium
            Bacteria; Bacillati; Bacillota; Erysipelotrichia;
            Erysipelotrichales.
REFERENCE   1  (residues 1 to 453)
  AUTHORS   Rasigraf,O.
  TITLE     Metagenomic analysis reveals large potential for carbon, nitrogen
            and sulfur cycling in coastal methanic sediments of the Bothnian
            Sea
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 453)
  AUTHORS   Rasigraf,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-MAR-2019) Microbiology, Radboud University Njmegen,
            Heyendaalseweg, Nijmegen 6525AJ, Netherlands
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-JUN-2017
            Assembly Method        :: MEGAHIT v. 1.1.1-2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1.33x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 03/25/2019 17:59:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.8
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 919
            CDSs (total)                      :: 906
            Genes (coding)                    :: 892
            CDSs (with protein)               :: 892
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 11
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 14
            CDSs (without protein)            :: 14
            Pseudo Genes (ambiguous residues) :: 0 of 14
            Pseudo Genes (frameshifted)       :: 7 of 14
            Pseudo Genes (incomplete)         :: 1 of 14
            Pseudo Genes (internal stop)      :: 7 of 14
            Pseudo Genes (multiple problems)  :: 1 of 14
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Erysipelotrichales bacterium"
                     /isolate="das_tool.maxbin2.92"
                     /isolation_source="Bothnian Sea sediment, site NB8"
                     /db_xref="taxon:2478483"
                     /environmental_sample
                     /geo_loc_name="Sweden: Bothnian Sea"
                     /lat_lon="63.29 N 19.49 E"
                     /collection_date="15-Apr-2015"
                     /collected_by="Caroline Slomp, Utrecht University"
                     /metagenome_source="marine sediment metagenome"
                     /note="metagenomic"
     Protein         1..453
                     /product="DEAD/DEAH box helicase"
     Region          8..425
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     CDS             1..453
                     /locus_tag="E4G74_00015"
                     /coded_by="SPCI01000001.1:2583..3944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006525464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
ORIGIN      
        1 msnfppilnd narrfvalng fkeltgiqse vlpyalkgrd vigisktgtg kthayliplm
       61 qkldpkinev qaliiaptre laqqiydfsk mmveinpdlr iklitggvdk krtteklikq
      121 phlvigtvgk ikdlfvddsl lridqattlv vdeadmilei gylkdldvia akmrdklqml
      181 vfsatipdnl rpfmkkymhn phiaqvmedp kfnprithvl vpikhrdyle aalllaknin
      241 pliclivcnt rtdaiklaek fqeaqirfvd lrgdmtarar kqamtlisne daqfvivtdv
      301 aargidipei shvisvgfps didfyihrag rtgrtgregt cyvlysekdq naiatltkrh
      361 iefkhmastd aglremkpyg eihvkrtkpq dieisklvnk rveqvkpgyk kkraaeveei
      421 krkrrsemiq ksikelgkak aklkqikkte dqe
//
1..453
/locus_tag="E4G74_00015"
/coded_by="SPCI01000001.1:2583..3944"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006525464.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
Feature TFG84104 : 1 segment
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