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energy-coupling factor ABC transporter transmembrane protein [Salmonella enterica subsp. enterica serovar Heidelberg]

GenBank: TAO25970.1

Identical Proteins FASTA Graphics 

LOCUS       TAO25970                 225 aa            linear   BCT 25-FEB-2019
DEFINITION  energy-coupling factor ABC transporter transmembrane protein
            [Salmonella enterica subsp. enterica serovar Heidelberg].
ACCESSION   TAO25970
VERSION     TAO25970.1
DBLINK      BioProject: PRJNA521409
            BioSample: SAMN10887039
DBSOURCE    accession SIIK01000001.1
KEYWORDS    .
SOURCE      Salmonella enterica subsp. enterica serovar Heidelberg
  ORGANISM  Salmonella enterica subsp. enterica serovar Heidelberg
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (residues 1 to 225)
  AUTHORS   Diarra,M.S.
  TITLE     Identication of primary AMR drivers in agricultural non-typhoidal
            Salmonella enterica serovars using machine learning
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 225)
  AUTHORS   Rehman,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-FEB-2019) Guelph Research and Development Center,
            Agriculture and Agri-Food Canada, 93 Stone Road West, Guelph,
            Ontario N1G 5C9, Canada
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: AUG-2017
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 133x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 02/20/2019 19:56:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 4.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 4,770
            CDSs (total)                      :: 4,664
            Genes (coding)                    :: 4,546
            CDSs (with protein)               :: 4,546
            Genes (RNA)                       :: 106
            rRNAs                             :: 8, 3, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 8 (5S)
            partial rRNAs                     :: 3, 5 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 16
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 60 of 118
            Pseudo Genes (incomplete)         :: 52 of 118
            Pseudo Genes (internal stop)      :: 35 of 118
            Pseudo Genes (multiple problems)  :: 27 of 118
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Salmonella enterica subsp. enterica serovar
                     Heidelberg"
                     /strain="3342"
                     /serovar="Heidelberg"
                     /isolation_source="fecal material"
                     /host="broiler chicken"
                     /sub_species="enterica"
                     /db_xref="taxon:611"
                     /geo_loc_name="Canada: British Columbia Fraser Valley"
                     /lat_lon="49.3764 N 121.8159 W"
                     /collection_date="2005"
                     /collected_by="Moussa Diarra"
     Protein         1..225
                     /product="energy-coupling factor ABC transporter
                     transmembrane protein"
     Region          1..225
                     /region_name="PRK15485"
                     /note="energy-coupling factor ABC transporter
                     transmembrane protein"
                     /db_xref="CDD:185382"
     Site            order(25..26,28..29,32..33,70,74..75,78..79,115,119,126,
                     129..130,135,150,154..155,157..159,161..162,165..166,
                     169..170,192..193,195..197,199..201,203..204,206..207,211,
                     214..215,221,223)
                     /site_type="other"
                     /note="S component interface [polypeptide binding]"
                     /db_xref="CDD:410987"
     Site            order(153,157,160..161,163..164,206,209..210,212..217,
                     220..222)
                     /site_type="other"
                     /note="A' component interface [polypeptide binding]"
                     /db_xref="CDD:410987"
     Site            order(174..181,194,197..198,201)
                     /site_type="other"
                     /note="A component interface [polypeptide binding]"
                     /db_xref="CDD:410987"
     CDS             1..225
                     /locus_tag="EYS04_02815"
                     /coded_by="complement(SIIK01000001.1:521785..522462)"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_456575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
ORIGIN      
        1 mtgldrlsyq srwvhvapqr kfllwlammi lafvlppvgq gielliiagl scwllrislw
       61 rwcrwmaipf gfllvgviti ifsisrepqm llagisvgpy wigitragvv tanetfwrsl
      121 talsatlwlv mnlpfpqlis llkrahiprl lteqilltwr flfilldeaa airraqtlrf
      181 gycslpngyr slamltgllf trvlmryqqm tttldiklyq gdfhl
//
1..225
/locus_tag="EYS04_02815"
/coded_by="complement(SIIK01000001.1:521785..522462)"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_456575.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
Feature TAO25970 : 1 segment
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