LOCUS UGPI2_ARATH 199 aa linear PLN 02-OCT-2024
DEFINITION RecName: Full=Uncharacterized GPI-anchored protein At5g19240;
Flags: Precursor.
ACCESSION Q84VZ5
VERSION Q84VZ5.2
DBSOURCE UniProtKB: locus UGPI2_ARATH, accession Q84VZ5;
class: standard.
extra accessions:Q8H7A4
created: Aug 29, 2003.
sequence updated: May 3, 2011.
annotation updated: Oct 2, 2024.
xrefs: AF083770.1, AAN60328.1, AC069326.1, CP002688.1, AED92674.1,
BT004589.1, AAO42835.1, NP_197425.1
xrefs (non-sequence databases): AlphaFoldDB:Q84VZ5, SMR:Q84VZ5,
BioGRID:17320, STRING:3702.Q84VZ5, PaxDb:3702-AT5G19240.1,
ProteomicsDB:246392, EnsemblPlants:AT5G19240.1,
EnsemblPlants:AT5G19240.1, EnsemblPlants:AT5G19240, GeneID:832044,
Gramene:AT5G19240.1, KEGG:ath:AT5G19240, Araport:AT5G19240,
TAIR:AT5G19240, eggNOG:ENOG502RYCU, HOGENOM:CLU_087436_1_0_1,
InParanoid:Q84VZ5, OrthoDB:702695at2759, PRO:PR:Q84VZ5,
Proteomes:UP000006548, ExpressionAtlas:Q84VZ5, GO:0005886,
GO:0009536, GO:0098552, GO:0071456, InterPro:IPR045285,
PANTHER:PTHR33976:SF9, PANTHER:PTHR33976
KEYWORDS Cell membrane; Glycoprotein; GPI-anchor; Lipoprotein; Membrane;
Reference proteome; Signal.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 199)
AUTHORS Stracke,R. and Palme,K.
TITLE Direct Submission
JOURNAL Submitted (??-AUG-1998) to the EMBL/GenBank/DDBJ databases
REMARK NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
REFERENCE 2 (residues 1 to 199)
AUTHORS Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
CONSRTM Kazusa DNA Research Institute; Cold Spring Harbor and Washington
University in St Louis Sequencing Consortium; European Union
Arabidopsis Genome Sequencing Consortium
TITLE Sequence and analysis of chromosome 5 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 823-826 (2000)
PUBMED 11130714
REMARK NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].;
STRAIN=cv. Columbia
REFERENCE 3 (residues 1 to 199)
AUTHORS Cheng,C.Y., Krishnakumar,V., Chan,A.P., Thibaud-Nissen,F.,
Schobel,S. and Town,C.D.
TITLE Araport11: a complete reannotation of the Arabidopsis thaliana
reference genome
JOURNAL Plant J 89 (4), 789-804 (2017)
PUBMED 27862469
REMARK GENOME REANNOTATION.;
STRAIN=cv. Columbia
REFERENCE 4 (residues 1 to 199)
AUTHORS Yamada,K., Lim,J., Dale,J.M., Chen,H., Shinn,P., Palm,C.J.,
Southwick,A.M., Wu,H.C., Kim,C., Nguyen,M., Pham,P., Cheuk,R.,
Karlin-Newmann,G., Liu,S.X., Lam,B., Sakano,H., Wu,T., Yu,G.,
Miranda,M., Quach,H.L., Tripp,M., Chang,C.H., Lee,J.M., Toriumi,M.,
Chan,M.M., Tang,C.C., Onodera,C.S., Deng,J.M., Akiyama,K.,
Ansari,Y., Arakawa,T., Banh,J., Banno,F., Bowser,L., Brooks,S.,
Carninci,P., Chao,Q., Choy,N., Enju,A., Goldsmith,A.D., Gurjal,M.,
Hansen,N.F., Hayashizaki,Y., Johnson-Hopson,C., Hsuan,V.W.,
Iida,K., Karnes,M., Khan,S., Koesema,E., Ishida,J., Jiang,P.X.,
Jones,T., Kawai,J., Kamiya,A., Meyers,C., Nakajima,M., Narusaka,M.,
Seki,M., Sakurai,T., Satou,M., Tamse,R., Vaysberg,M.,
Wallender,E.K., Wong,C., Yamamura,Y., Yuan,S., Shinozaki,K.,
Davis,R.W., Theologis,A. and Ecker,J.R.
TITLE Empirical analysis of transcriptional activity in the Arabidopsis
genome
JOURNAL Science 302 (5646), 842-846 (2003)
PUBMED 14593172
REMARK NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].;
STRAIN=cv. Columbia
COMMENT On May 6, 2011 this sequence version replaced Q84VZ5.1.
[SUBCELLULAR LOCATION] Cell membrane {ECO:0000250}; Lipid-anchor,
GPI-anchor {ECO:0000250}.
[SIMILARITY] Belongs to the UPF0277 family. {ECO:0000305}.
FEATURES Location/Qualifiers
source 1..199
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
gene 1..199
/locus_tag="At5g19240"
/gene_synonym="T24G5.140"
Protein 1..199
/product="Uncharacterized GPI-anchored protein At5g19240"
/UniProtKB_evidence="Evidence at transcript level"
Region 1..25
/region_name="Signal"
/note="/evidence=ECO:0000255."
Region 16
/region_name="Conflict"
/note="F -> L (in Ref. 4; AAO42835).
/evidence=ECO:0000305."
Region 17..18
/region_name="Conflict"
/note="LS -> IF (in Ref. 1; AAN60328).
/evidence=ECO:0000305."
Region 26..169
/region_name="Mature chain"
/note="Uncharacterized GPI-anchored protein At5g19240.
/id=PRO_0000036269."
Site 45
/site_type="glycosylation"
/note="N-linked (GlcNAc...) asparagine.
/evidence=ECO:0000255."
Site 73
/site_type="glycosylation"
/note="N-linked (GlcNAc...) asparagine.
/evidence=ECO:0000255."
Site 102
/site_type="glycosylation"
/note="N-linked (GlcNAc...) asparagine.
/evidence=ECO:0000255."
Site 135
/site_type="glycosylation"
/note="N-linked (GlcNAc...) asparagine.
/evidence=ECO:0000255."
Site 169
/site_type="lipid-binding"
/note="GPI-anchor amidated serine. /evidence=ECO:0000255."
Region 170..199
/region_name="Propeptide"
/note="Removed in mature form. /evidence=ECO:0000255.
/id=PRO_0000036270."
Region 188..199
/region_name="Conflict"
/note="HVLSHNSLSLFS -> LFCFFMF (in Ref. 1; AAN60328).
/evidence=ECO:0000305."
ORIGIN
1 maisklhlvl fllsvflslh rpvlsntdge nllftvfnqy resvnltnlk knknaeclad
61 evvdqlqnqp ctnttgsasv pgtdpgipnf pnllakcrln tnvtrdglil qvcapkhhst
121 pdlssfanvl tknlndskft gagvgidsdg iwlvtvlttn tpggsysnsg afafgvnglv
181 ssslmflhvl shnslslfs
//