LOCUS NZ_QETU01000006 208615 bp DNA linear CON 17-JUN-2024
DEFINITION Escherichia coli strain E461 Scaffold6_1, whole genome shotgun
sequence.
ACCESSION NZ_QETU01000006 NZ_QETU01000000
VERSION NZ_QETU01000006.1
DBLINK BioProject: PRJNA224116
BioSample: SAMN08949648
Assembly: GCF_003328205.1
KEYWORDS WGS; RefSeq.
SOURCE Escherichia coli
ORGANISM Escherichia coli
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE 1 (bases 1 to 208615)
AUTHORS Chen,L. and Afrah Yassin,Y.
TITLE Genetic characterization of extraintestinal Escherichia coli
isolates from chicken, cow and swine
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 208615)
AUTHORS Chen,L. and Afrah Yassin,Y.
TITLE Direct Submission
JOURNAL Submitted (19-APR-2018) College of veterinary, Yangzhou university,
No. 12, Wenhui east road, Yangzhou, Jiangsu 225009, China
COMMENT REFSEQ INFORMATION: The reference sequence is identical to
QETU01000006.1.
The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Method :: SOAPdenovo v. 2.3
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 100x
Sequencing Technology :: Illumina HiSeq
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Name :: GCF_003328205.1-RS_2024_06_17
Annotation Date :: 06/17/2024 04:04:47
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 6.7
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA
Genes (total) :: 5,414
CDSs (total) :: 5,312
Genes (coding) :: 5,016
CDSs (with protein) :: 5,016
Genes (RNA) :: 102
rRNAs :: 4, 3, 4 (5S, 16S, 23S)
complete rRNAs :: 3 (5S)
partial rRNAs :: 1, 3, 4 (5S, 16S, 23S)
tRNAs :: 80
ncRNAs :: 11
Pseudo Genes (total) :: 296
CDSs (without protein) :: 296
Pseudo Genes (ambiguous residues) :: 1 of 296
Pseudo Genes (frameshifted) :: 103 of 296
Pseudo Genes (incomplete) :: 197 of 296
Pseudo Genes (internal stop) :: 53 of 296
Pseudo Genes (multiple problems) :: 50 of 296
CRISPR Arrays :: 2
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..208615
/organism="Escherichia coli"
/mol_type="genomic DNA"
/submitter_seqid="Scaffold6_1"
/strain="E461"
/host="Sus scrofa"
/db_xref="taxon:562"
/geo_loc_name="China"
/collection_date="2014-08"
gene 289..2541
/locus_tag="DC465_RS08020"
/pseudo
CDS 289..2541
/locus_tag="DC465_RS08020"
/inference="COORDINATES: similar to AA
sequence:RefSeq:YP_008439272.1"
/GO_function="GO:0003824 - catalytic activity [Evidence
IEA]"
/GO_process="GO:0005975 - carbohydrate metabolic process
[Evidence IEA]"
/note="internal stop; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="alpha-amylase family glycosyl hydrolase"
gene 2877..3854
/gene="glaH"
/locus_tag="DC465_RS08025"
CDS 2877..3854
/gene="glaH"
/locus_tag="DC465_RS08025"
/EC_number="1.14.11.64"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311547.2"
/GO_function="GO:0050498 - oxidoreductase activity, acting
on paired donors, with incorporation or reduction of
molecular oxygen, with 2-oxoglutarate as one donor, and
the other dehydrogenated [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="glutarate dioxygenase GlaH"
/protein_id="WP_001315804.1"
/translation="MNALTAVQNNAVDSGQDYSGFTLIPSAQSPRLLELTFTEQTTKQ
FLEQVAEWPVQALEYKSFLRFRVGKILDDLCANQLQPLLLKTLLNRAEGALLINAVGI
DDVAQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELH
NDGTYVEEITDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDHYFRHPLARRPMRFAAPP
SKNVSKDVFHPVFDVDQQGRPVMRYIDQFVQPKDFEEGVWLSELSDAIETSKGILSVP
VPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFAYATHHYQTHQ"
gene 3874..5142
/gene="lhgO"
/locus_tag="DC465_RS08030"
CDS 3874..5142
/gene="lhgO"
/locus_tag="DC465_RS08030"
/EC_number="1.1.3.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311548.2"
/GO_function="GO:0016491 - oxidoreductase activity
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="L-2-hydroxyglutarate oxidase"
/protein_id="WP_000271984.1"
/translation="MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESGPACHQTG
HNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQNGIRYDNCGKMLVATSELEMERM
RALWERTAANGIEREWLNAMELREREPNITGLGGIFVPSSGIVSYRNVTAAMAKIFQA
RGGEIIYNAEVSGLSEHKNGVVIRTRQGGEYEASTLISCSGLMADRLVKMLGLEPGFI
ICPFRGEYFRLAPEHNQIVNHLIYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKR
EGYRKRDFSFSDTLEILGSSGIRRVLQNHLRSGLGEMKNSLCKSGYLRLVQKYCPRLS
LSDLQPWPAGVRAQAVSPDGKLIDDFLFVTTPRTIHTCNAPSPAATSAIPIGAHIVSK
VQTLLASQSNPGRTLRAARSVDALHAAFNQ"
gene 5165..6613
/gene="gabD"
/locus_tag="DC465_RS08035"
CDS 5165..6613
/gene="gabD"
/locus_tag="DC465_RS08035"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311549.1"
/GO_function="GO:0009013 - succinate-semialdehyde
dehydrogenase [NAD(P)+] activity [Evidence IEA]"
/GO_process="GO:0009450 - gamma-aminobutyric acid
catabolic process [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="NADP-dependent succinate-semialdehyde
dehydrogenase"
/protein_id="WP_000772854.1"
/translation="MKLNDSNLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPK
MGADETRAAIDAANRALPAWRALTAKERANILRNWFNLMMEHQDDLARLMTLEQGKPL
AEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPA
AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGN
ELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEG
ALSSKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLENGVTIGPLIDE
KAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLA
PLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVA
PFGGIKASGLGREGSKYGIEDYLEIKYMCIGL"
gene 6627..7907
/gene="gabT"
/locus_tag="DC465_RS08040"
CDS 6627..7907
/gene="gabT"
/locus_tag="DC465_RS08040"
/EC_number="2.6.1.19"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311550.1"
/GO_function="GO:0003867 - 4-aminobutyrate transaminase
activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate
binding [Evidence IEA]"
/GO_process="GO:0009448 - gamma-aminobutyric acid
metabolic process [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="4-aminobutyrate--2-oxoglutarate transaminase"
/protein_id="WP_000097660.1"
/translation="MSSNKELMQRRSQAIPRGVGQIHPIFADRAENCRVWDVEGREYL
DFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGNFA
KKTLLVTTGSEAVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMG
LMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYAAS
PAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPL
AGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDG
LLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGP
YYNVLRILVPLTIEDAQIRQGLEIISQCFDEAKQ"
gene 8145..9545
/gene="gabP"
/locus_tag="DC465_RS08045"
CDS 8145..9545
/gene="gabP"
/locus_tag="DC465_RS08045"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417149.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/GO_function="GO:0015185 - gamma-aminobutyric acid
transmembrane transporter activity [Evidence IEA]"
/GO_process="GO:0006865 - amino acid transport [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="GABA permease"
/protein_id="WP_001295173.1"
/translation="MGQSSQPHELGGGLKSRHVTMLSIAGVIGASLFVGSSVAIAEAG
PAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWFW
VLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKV
IAILAFIFLGAVAISGFYPYAEVSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAE
IVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVVALIPWNMPGLKAVGSYRSV
LELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTP
YVAVLLSTGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAE
GSEIRLRMWLYPWLTWLVIGFITFVLVVMLFRPAQQLEVISTGLLAIGIICTVPIMAR
WKKLVLWQKTPVHNTR"
gene 9566..10228
/gene="csiR"
/locus_tag="DC465_RS08050"
CDS 9566..10228
/gene="csiR"
/locus_tag="DC465_RS08050"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311552.2"
/GO_function="GO:0003700 - DNA-binding transcription
factor activity [Evidence IEA]"
/GO_process="GO:0006355 - regulation of DNA-templated
transcription [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator CsiR"
/protein_id="WP_000156811.1"
/translation="MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLR
EALSQLVAERLVTVVNQKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGGDEWEA
DVLAKAHLLSKLEACDASEKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAAR
YRFIWLRRTVLSVEMLEDKHDQHQTLTAAVLARDTARASELMRQHLLTPIPIIQQAMA
GN"
gene complement(10229..10678)
/gene="kbp"
/locus_tag="DC465_RS08055"
CDS complement(10229..10678)
/gene="kbp"
/locus_tag="DC465_RS08055"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417151.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="potassium binding protein Kbp"
/protein_id="WP_000522415.1"
/translation="MGLFNFVKDAGEKLWDAVTGQHDKDDQAKKVQEHLNKTGIPDAD
KVNIQIADGKATVTGDGLSQEAKEKILVAVGNISGIASVDDQVKTATPATASQFYTVK
SGDTLSAISKQVYGNANLYNKIFEANKPMLKSPDKIYPGQVLRIPEE"
gene complement(10762..10920)
/gene="yqaE"
/locus_tag="DC465_RS08060"
CDS complement(10762..10920)
/gene="yqaE"
/locus_tag="DC465_RS08060"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311554.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="YqaE/Pmp3 family membrane protein"
/protein_id="WP_000508177.1"
/translation="MGFWRIVITIILPPLGVLLGKGFGWAFIINILLTLLGYIPGLIH
AFWVQTRD"
gene 11103..11402
/gene="ygaV"
/locus_tag="DC465_RS08065"
CDS 11103..11402
/gene="ygaV"
/locus_tag="DC465_RS08065"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417153.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA];
GO:0003700 - DNA-binding transcription factor activity
[Evidence IEA]"
/GO_process="GO:0006355 - regulation of DNA-templated
transcription [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ArsR/SmtB family transcription factor"
/protein_id="WP_000137280.1"
/translation="MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGEL
TRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP"
gene 11412..11936
/gene="ygaP"
/locus_tag="DC465_RS08070"
CDS 11412..11936
/gene="ygaP"
/locus_tag="DC465_RS08070"
/EC_number="2.8.1.1"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417154.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="thiosulfate sulfurtransferase YgaP"
/protein_id="WP_001229444.1"
/translation="MALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLS
VLEQSGLPAKLRHEQIIFHCQAGKRTSNNADKLAAIAAPAEIFLLEDGIDGWKRAGLP
VAVNKSQPFPLMRQVQIAAGGLILIGVVLGYTVNSGFFLLSGFVGAGLLFAGISGFCG
MARLLDKMPWNQRA"
gene complement(11983..12387)
/gene="stpA"
/locus_tag="DC465_RS08075"
CDS complement(11983..12387)
/gene="stpA"
/locus_tag="DC465_RS08075"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311557.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DNA-binding protein StpA"
/protein_id="WP_000115383.1"
/translation="MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEE
EQQQRELAERQEKISTWLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDV
NGETKTWTGQGRTPKPIAQALAEGKSLDDFLI"
gene 13055..13504
/gene="alaE"
/locus_tag="DC465_RS08080"
CDS 13055..13504
/gene="alaE"
/locus_tag="DC465_RS08080"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311558.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="L-alanine exporter AlaE"
/protein_id="WP_000492656.1"
/translation="MFSPQSRLRHAVADTFAMVVYCSVVNMCIEVFLSGMSFEQSFYS
RLVAIPVNILIAWPYGMYRDLFMRAARKVSPSGWIKNLADILAYVTFQSPVYVAILLV
VGADWHQIMAAVSSNIVVSMLMGAVYGYFLDYCRRLFKVSRYQQVKA"
gene complement(13541..13885)
/gene="ygaC"
/locus_tag="DC465_RS08085"
CDS complement(13541..13885)
/gene="ygaC"
/locus_tag="DC465_RS08085"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311559.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF2002 family protein"
/protein_id="WP_000281320.1"
/translation="MYLRPDEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNREARM
GRTALVIHPTLKERSSTLAEPASDIKTCDHYQQFPLYLAGERHEHYGIPHGFSSRVAL
ERYLNGLFGEAS"
gene 14037..14366
/gene="ygaM"
/locus_tag="DC465_RS08090"
CDS 14037..14366
/gene="ygaM"
/locus_tag="DC465_RS08090"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311560.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF883 domain-containing protein"
/protein_id="WP_001295174.1"
/translation="MFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAE
AARSKAQALLKETRARMHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGA
LLSMRKS"
gene 14614..14859
/gene="nrdH"
/locus_tag="DC465_RS08095"
CDS 14614..14859
/gene="nrdH"
/locus_tag="DC465_RS08095"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311563.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="glutaredoxin-like protein NrdH"
/protein_id="WP_001223227.1"
/translation="MRITIYTRNDCVQCHATKRAMENRGFDFEMINVDRVPEAAEALR
AQGFRQLPVVIAGDLSWSGFRPDMINRLHPAPHAASA"
gene 14856..15266
/gene="nrdI"
/locus_tag="DC465_RS08100"
CDS 14856..15266
/gene="nrdI"
/locus_tag="DC465_RS08100"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311564.1"
/GO_process="GO:0009263 - deoxyribonucleotide biosynthetic
process [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="class Ib ribonucleoside-diphosphate reductase
assembly flavoprotein NrdI"
/protein_id="WP_000080947.1"
/translation="MSQLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYIL
IVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCG
VPWLYRFELMGTQSDIENVRKGVTEFWQRQPQNA"
gene 15239..17383
/gene="nrdE"
/locus_tag="DC465_RS08105"
CDS 15239..17383
/gene="nrdE"
/locus_tag="DC465_RS08105"
/EC_number="1.17.4.1"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417161.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA];
GO:0004748 - ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor [Evidence
IEA]"
/GO_process="GO:0006260 - DNA replication [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="class 1b ribonucleoside-diphosphate reductase
subunit alpha"
/protein_id="WP_000246517.1"
/translation="MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAF
IATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFAHAHTSGFRFQTF
LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPA
TPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG
APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN
ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADIAISEHYDEL
VADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEIL
QVNCASEYDENLDYARTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSH
IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYTITWHALRT
SMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFARSGITLPTREMW
AQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPA
PFMTNENLALYQDAYKIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIY
AWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL"
gene 17393..18352
/gene="nrdF"
/locus_tag="DC465_RS08110"
CDS 17393..18352
/gene="nrdF"
/locus_tag="DC465_RS08110"
/EC_number="1.17.4.1"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417162.1"
/GO_component="GO:0005971 - ribonucleoside-diphosphate
reductase complex [Evidence IEA]"
/GO_function="GO:0030145 - manganese ion binding [Evidence
IEA]; GO:0004748 - ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor [Evidence
IEA]"
/GO_process="GO:0009265 - 2'-deoxyribonucleotide
biosynthetic process [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="class 1b ribonucleoside-diphosphate reductase
subunit beta"
/protein_id="WP_000777965.1"
/translation="MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPA
WQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHA
RSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESF
LFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQLEEL
KSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMA
EVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDWNF"
gene 18707..19909
/gene="proV"
/locus_tag="DC465_RS08115"
CDS 18707..19909
/gene="proV"
/locus_tag="DC465_RS08115"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417163.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/GO_process="GO:0031460 - glycine betaine transport
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="glycine betaine/L-proline ABC transporter
ATP-binding protein ProV"
/protein_id="WP_000985494.1"
/translation="MAIKLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGV
KDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELRE
VRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHS
YPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTI
VFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGVDISQVFSA
KDIARRTPNGLIRKTPGFGPRSALKLLQDEDREYGYVIERGNKFVGAVSIDSLKTALT
QQQGLDAALIDAPLAVDAQTPLSELLSHVGQAPCAVPVVDEDQQYVGIISKGMLLRAL
DREGVNNG"
gene 19902..20966
/gene="proW"
/locus_tag="DC465_RS08120"
CDS 19902..20966
/gene="proW"
/locus_tag="DC465_RS08120"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311568.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/GO_process="GO:0055085 - transmembrane transport
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="glycine betaine/L-proline ABC transporter
permease ProW"
/protein_id="WP_000774978.1"
/translation="MADQNNPWDTTPAADSAAQSADAWGTPATAPTDGGGADWLTSTP
APNVEHFNILDPFHKTLIPLDSWVTEGIDWVVTHFRPVFQGVRVPVDYILNGFQQLLL
GMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI
VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFA
LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLAL
SMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRLTQAVGRDSRSR
GNRRWYTTGPVGLLTRPFIK"
gene 21024..22016
/gene="proX"
/locus_tag="DC465_RS08125"
CDS 21024..22016
/gene="proX"
/locus_tag="DC465_RS08125"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311569.1"
/GO_component="GO:0043190 - ATP-binding cassette (ABC)
transporter complex [Evidence IEA]"
/GO_function="GO:0022857 - transmembrane transporter
activity [Evidence IEA]"
/GO_process="GO:0055085 - transmembrane transport
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="glycine betaine/L-proline ABC transporter
substrate-binding protein ProX"
/protein_id="WP_001216521.1"
/translation="MRHSVLFATAFATLISTQTFAADLPGKGITVNPVQSTITEETFQ
TLLVSRALEKLGYTVNKPSEVDYNVGYTSLASGDATFTAVNWTPLHDNMYEAAGGDKK
FYREGVFVNGAAQGYLIDKKTADQYKITNIAQLKDPKIAKLFDTNGDGKADLTGCNPG
WGCEGAINHQLAAYELTHTVTHNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNEL
KPGKDVVWLQVPFSALPGDKNADTKLPNGANYGFPVSTMHIVANKAWAEKNPAAAKLF
AIMQLPVADINAQNAIMHDGKASEGDIQGHVDGWIKAHQQQFDGWVNEALAAQK"
gene 22308..23492
/locus_tag="DC465_RS08130"
CDS 22308..23492
/locus_tag="DC465_RS08130"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311570.1"
/GO_function="GO:0022857 - transmembrane transporter
activity [Evidence IEA]"
/GO_process="GO:0055085 - transmembrane transport
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="MFS transporter"
/protein_id="WP_000165699.1"
/translation="MTKPNHELSPALIVLMSIATGLAVASNYYAQPLLDTIARNFSLS
ASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRRLIVSMTLLAAGGMLITASSQSLAMM
ILGTALTGLFSVVAQILVPLAATLASPDKRGKVVGTIMSGLLLGILLARTVAGLLANL
GGWRTVFWVASVLMALMALALWRGLPQMKSETHLNYPQLLGSVFSMFISDKILRTRAL
LGCLTFANFSILWTSMAFLLAAPPFNYSDGVIGLFGLAGAAGALGARPAGGFADKGKS
HHTTTFGLLLLLLSWLAIWFGHTSVLALIIGILVLDLTVQGVHITNQTVIYRIHPDAR
NRLTAGYMTSYFIGGAAGSLISASAWQHGGWAGVCLAGATIALVNLLVWWRGFHRQEA
AN"
gene 23616..24353
/gene="ygaZ"
/locus_tag="DC465_RS08135"
CDS 23616..24353
/gene="ygaZ"
/locus_tag="DC465_RS08135"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311571.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="L-valine exporter subunit YgaZ"
/protein_id="WP_000445658.1"
/translation="MESPTPQPAPGSATFMEGCKDSLPIVISYIPVAFAFGLNATRLG
FSPLESVFFSCIIYAGASQFVITAMLAAGSSLWVAALTVMAMDVRHVLYGPSLRSRII
QRLQKSKTALWAFGLTDEVFAAATAKLVRNNRRWSENWMIGIAFSSWSSWVFGTVIGA
FSGSGLLQGYPAVEAALGFMLPALFMSFLLASFQRKQSLCVTAALVGALAGVTLFSIP
VAILAGIVCGCLTALIQAFWQGAPDEL"
gene 24343..24678
/gene="ygaH"
/locus_tag="DC465_RS08140"
CDS 24343..24678
/gene="ygaH"
/locus_tag="DC465_RS08140"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311572.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="L-valine transporter subunit YgaH"
/protein_id="WP_000119750.1"
/translation="MSYEVLLLGLLVGAANYCFRYLPLRLRVGNARPTKRGAVGILLD
TIGIASICALLVVSTAPEVMHDTRRFVPTLVGFAVLGASFYKTRSIIIPTLLSALTYG
LVWKVMAII"
gene 24769..25299
/gene="emrR"
/locus_tag="DC465_RS08145"
CDS 24769..25299
/gene="emrR"
/locus_tag="DC465_RS08145"
/function="regulator; Plasmid-related functions"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311573.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="multidrug efflux transporter EmrAB
transcriptional repressor EmrR"
/protein_id="WP_000378442.1"
/translation="MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENR
NKMLKAQGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIE
RRESDNDRRCLHLQLTEKGHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLS
RLDQMEQDGVVLEAMS"
gene 25426..26598
/gene="emrA"
/locus_tag="DC465_RS08150"
CDS 25426..26598
/gene="emrA"
/locus_tag="DC465_RS08150"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311574.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="multidrug efflux MFS transporter periplasmic
adaptor subunit EmrA"
/protein_id="WP_001295175.1"
/translation="MSANAETQTPQQPVKKSGKRKRLLLLLTLLFIIIAVAIGIYWFL
VLRHFEETDDAYVAGNQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFE
KAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREEL
QHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERTRI
VSPMTGYVSRRAVQPGAQISPTTPLMAVVPATNMWVDANFKETQIANMRIGQPVTITT
DIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDQKQLEQYP
LRIGLSTLVSVNTTNRDGQVLANKVRSTPVAVSTAREISLAPVNKLIDDIVKANAG"
gene 26615..28153
/gene="emrB"
/locus_tag="DC465_RS08155"
CDS 26615..28153
/gene="emrB"
/locus_tag="DC465_RS08155"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311575.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="multidrug efflux MFS transporter permease
subunit EmrB"
/protein_id="WP_001295176.1"
/translation="MQQQKPLEGAQLVIMTIALSLATFMQVLDSTIANVAIPTIAGNL
GSSLSQGTWVITSFGVANAISIPLTGWLAKRVGEVKLFLWSTIAFAIASWACGVSSSL
NMLIFFRVIQGIVAGPLIPLSQSLLLNNYPPAKRSIALALWSMTVIVAPICGPILGGY
ISDNYHWGWIFFINVPIGVAVVLMTLQTLRGRETRTERRRIDAVGLALLVIGIGSLQI
MLDRGKELDWFSSQEIIILTVVAVVAICFLIVWELTDDNPIVDLSLFKSRNFTIGCLC
ISLAYMLYFGAIVLLPQLLQEVYGYTATWAGLASAPVGIIPVILSPIIGRFAHKLDMR
RLVTFSFIMYAVCFYWRAYTFEPGMDFGASAWPQFIQGFAVACFFMPLTTITLSGLPP
ERLAAASSLSNFTRTLAGSIGTSITTTMWTNRESMHHAQLTESVNPFNPNAQAMYSQL
EGLGMTQQQASGWIAQQITNQGLIISANEIFWMSAGIFLVLLGLVWFAKPPFGAGGGG
GGAH"
gene complement(28217..28732)
/gene="luxS"
/locus_tag="DC465_RS08160"
CDS complement(28217..28732)
/gene="luxS"
/locus_tag="DC465_RS08160"
/EC_number="4.4.1.21"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008458247.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="S-ribosylhomocysteine lyase"
/protein_id="WP_001130207.1"
/translation="MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPN
KEVMPERGIHTLEHLFAGFMRNHLNGKGVEIIDISPMGCRTGFYMSLIGTPDEQRVAD
AWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPKEKLQELHI"
gene complement(28882..30438)
/gene="gshA"
/locus_tag="DC465_RS08165"
CDS complement(28882..30438)
/gene="gshA"
/locus_tag="DC465_RS08165"
/EC_number="6.3.2.2"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417173.1"
/GO_function="GO:0004357 - glutamate-cysteine ligase
activity [Evidence IEA]"
/GO_process="GO:0006750 - glutathione biosynthetic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="glutamate--cysteine ligase"
/protein_id="WP_000611802.1"
/translation="MIPDVSQALAWLEKHPQALKGIQRGLERETLRVNADGTLATTGH
PEALGSALTHKWITTDFAEALLEFITPVDGDIEHMLTFMRDLHRYTARNMGDERMWPL
SMPCYIAEGQDIELAQYGTSNTGRFKTLYREGLKNRYGALMQTISGVHYNFSLPMAFW
QAKCGDISGADAKEKISAGYFRVIRNYYRFGWVIPYLFGASPAICSSFLQGKPTSLPF
EKTECGMYYLPYATSLRLSDLGYTNKSQSNLGITFNDLYEYVAGLKQAIKTPSEEYAK
IGIEKDGKRLQINSNVLQIENELYAPIRPKRVTRSGESPSDALLRGGIEYIEVRSLDI
NPFSPIGVDEQQVRFLDLFMVWCALADAPEMSSSELACTRVNWNRVILEGRKPGLTLG
IGCETAQFPLLQVGKDLFRDLKRVAQTLDSINGGEAYQKVCDELVACFDNPDLTFSAR
ILRSMIDTGIGGTGKAFAEAYRNLLREEPLEILREEDFVAEREASERRQQEMETADTE
PFAVWLEKHA"
gene complement(30511..30939)
/gene="yqaA"
/locus_tag="DC465_RS08170"
CDS complement(30511..30939)
/gene="yqaA"
/locus_tag="DC465_RS08170"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417174.1"
/GO_component="GO:0005886 - plasma membrane [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="YqaA family protein"
/protein_id="WP_001287465.1"
/translation="MSEALSLLSLFASSFLSATLLPGNSEVVLVAMLLSGISYPWVLV
LTATMGNSLGGLTNVILGRFFPLRKTSRWQEKATGWLKRYGAVTLLLSWMPVVGDLLC
LLAGWMRISWGPVIFFLCLGKALRYVAVAAATVQGMMWWH"
gene complement(30936..31502)
/gene="yqaB"
/locus_tag="DC465_RS08175"
CDS complement(30936..31502)
/gene="yqaB"
/locus_tag="DC465_RS08175"
/EC_number="3.1.3.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311579.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="fructose-1-phosphate/6-phosphogluconate
phosphatase"
/protein_id="WP_000273309.1"
/translation="MYERYAGLIFDMDGTILDTEPTHRKAWREVLGHYGLQYDVQAMI
ALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVRSMLLDSVEPLPLVEVVKSWHGR
RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPT
QCVVFEDADFGIQAARAAGMDAVDVRLL"
gene complement(31783..31859)
/locus_tag="DC465_RS08180"
tRNA complement(31783..31859)
/locus_tag="DC465_RS08180"
/product="tRNA-Arg"
/inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
/note="Derived by automated computational analysis using
gene prediction method: tRNAscan-SE."
/anticodon=(pos:complement(31823..31825),aa:Arg,seq:acg)
gene complement(32058..32134)
/locus_tag="DC465_RS08185"
tRNA complement(32058..32134)
/locus_tag="DC465_RS08185"
/product="tRNA-Arg"
/inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
/note="Derived by automated computational analysis using
gene prediction method: tRNAscan-SE."
/anticodon=(pos:complement(32098..32100),aa:Arg,seq:acg)
gene complement(32332..32408)
/locus_tag="DC465_RS08190"
tRNA complement(32332..32408)
/locus_tag="DC465_RS08190"
/product="tRNA-Arg"
/inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
/note="Derived by automated computational analysis using
gene prediction method: tRNAscan-SE."
/anticodon=(pos:complement(32372..32374),aa:Arg,seq:acg)
gene complement(32412..32504)
/locus_tag="DC465_RS08195"
tRNA complement(32412..32504)
/locus_tag="DC465_RS08195"
/product="tRNA-Ser"
/inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
/note="Derived by automated computational analysis using
gene prediction method: tRNAscan-SE."
/anticodon=(pos:complement(32468..32470),aa:Ser,seq:gct)
gene complement(32820..33005)
/gene="csrA"
/locus_tag="DC465_RS08200"
CDS complement(32820..33005)
/gene="csrA"
/locus_tag="DC465_RS08200"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001774971.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="carbon storage regulator CsrA"
/protein_id="WP_000906486.1"
/translation="MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHR
EEIYQRIQAEKSQQSSY"
gene complement(33240..35870)
/gene="alaS"
/locus_tag="DC465_RS08205"
CDS complement(33240..35870)
/gene="alaS"
/locus_tag="DC465_RS08205"
/EC_number="6.1.1.7"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311581.1"
/GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
/GO_function="GO:0004813 - alanine-tRNA ligase activity
[Evidence IEA]; GO:0000166 - nucleotide binding [Evidence
IEA]"
/GO_process="GO:0006419 - alanyl-tRNA aminoacylation
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="alanine--tRNA ligase"
/protein_id="WP_000047176.1"
/translation="MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGM
NQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDY
FKHDAIQFAWELLTSEKWFALPKERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDN
KGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQ
FNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDL
SNKSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKL
VGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDG
ETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAMI
RVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGD
KGELKGANFSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSA
THLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL
PIETNIMDLEAAKAKGAMALFGEKYDERVRVLSMGDFSTELCGGTHASRTGDIGLFRI
ISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNNLADKVRSVLERTR
QLEKELQQLKEQAAAQESANLSSKAIDVNGVKLLVSELSGVEPKMLRTMVDDLKNQLG
STIIVLATVAEGKVSLIAGVSKDVTDRVKAGELIGMVAQQVGGKGGGRPDMAQAGGTD
AAALPAALASVKGWVSAKLQ"
gene complement(35998..36498)
/gene="recX"
/locus_tag="DC465_RS08210"
CDS complement(35998..36498)
/gene="recX"
/locus_tag="DC465_RS08210"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311582.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="recombination regulator RecX"
/protein_id="WP_000140519.1"
/translation="MTESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLVAPIMGKN
GPEEIDATAEDYERVIAWCHEHGYLDDSRFVARFIASRSRKGYGPARIRQELNQKGIS
REATEKAMRECDIDWCALARDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIQDI
WRNFAD"
gene complement(36741..37802)
/gene="recA"
/locus_tag="DC465_RS08215"
CDS complement(36741..37802)
/gene="recA"
/locus_tag="DC465_RS08215"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311583.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA];
GO:0008094 - ATP-dependent activity, acting on DNA
[Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA];
GO:0003697 - single-stranded DNA binding [Evidence IEA]"
/GO_process="GO:0006281 - DNA repair [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="recombinase RecA"
/protein_id="WP_000963143.1"
/translation="MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTG
SLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDP
IYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKF
YASVRLDIRRIGAVKEGENVVGSETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELV
DLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEIEKKVRELLLSNPNS
TPDFSVDDSEGVAETNEDF"
gene complement(37882..38379)
/gene="pncC"
/locus_tag="DC465_RS08220"
CDS complement(37882..38379)
/gene="pncC"
/locus_tag="DC465_RS08220"
/EC_number="3.5.1.42"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417180.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="nicotinamide-nucleotide amidase"
/protein_id="WP_000132231.1"
/translation="MTDSELMQLSEQVGQALKARGATVTTAESCTGGWVAKVITDIAG
SSAWFERGFVTYSNEAKAQMIGVREETLAQHGAVSEPVVVEMAIGALKAARADYAVSI
SGIAGPDGGSEEKPVGTVWFAFATARGEGITRRECFSGDRDAVRRQATAYALQTLWQQ
FLQNT"
gene complement(38524..39609)
/gene="mltB"
/locus_tag="DC465_RS08225"
CDS complement(38524..39609)
/gene="mltB"
/locus_tag="DC465_RS08225"
/EC_number="4.2.2.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417181.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="lytic murein transglycosylase B"
/protein_id="WP_001299653.1"
/translation="MFKRRYVTLLPLFVLLAACSSKPKPTETETTTGTPSGGFLLEPQ
HNVMQMGGDFANNPNAQQFIDKMVNKHGFDRQQLQEILSQAKRLDSVLRLMDNQAPTT
SVKPPSGPNGAWLRYRKKFITPDNVQNGVVFWNQYEDALNRAWQVYGVPPEIIVGIIG
VETRWGRVMGKTRILDALATLSFNYPRRAEYFSGELETFLLMARDEQDDPLNLKGSFA
GAMGYGQFMPSSYKQYAVDFSGDGHINLWDPVDAIGSVANYFKAHGWVKGDQVAVMAN
GQAPGLPNGFKTRYSISQLATAGLTPQQPLGNHQQASLLRLDVGTGYQYWYGLPNFYT
ITRYNHSTHYAMAVWQLGQAVALARVQ"
gene 39865..40428
/gene="srlA"
/locus_tag="DC465_RS08230"
/gene_synonym="gutA"
CDS 39865..40428
/gene="srlA"
/locus_tag="DC465_RS08230"
/gene_synonym="gutA"
/EC_number="2.7.1.198"
/inference="COORDINATES: similar to AA
sequence:RefSeq:YP_026180.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="PTS glucitol/sorbitol transporter subunit IIC"
/protein_id="WP_000573325.1"
/translation="MIETITHGAEWFIGLFQKGGEVFTGMVTGILPLLISLLVIMNAL
INFIGQHRIERFAQRCAGNPVSRYLLLPCIGTFVFCNPMTLSLGRFMPEKYKPSYYAA
ASYSCHSMNGLFPHINPGELFVYLGIASGLTTLNLPLGPLAVSYLLVGLVTNFFRGWV
TDLTTAVFEKKMGIQLEQKVHLAGATS"
gene 40425..41384
/gene="srlE"
/locus_tag="DC465_RS08235"
/gene_synonym="gutE"
CDS 40425..41384
/gene="srlE"
/locus_tag="DC465_RS08235"
/gene_synonym="gutE"
/EC_number="2.7.1.198"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_708510.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="PTS glucitol/sorbitol transporter subunit IIB"
/protein_id="WP_000196934.1"
/translation="MTRIRIEKGTGGWGGPLELEATPGKKIVYITAGTRPAIVDKLAQ
LTGWQAIDGFKEGEPAEAEIGVAVIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQY
IVEDIYVSGVKEENITVVGDATPQPSSVGRDYDTSKKITEQSDGLLAKVGMGMGSAVA
VLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVMLA
LICSFPLLSPFLGPGAVIAQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPV
GLSLAEARQDTVRVGVPSVLVSRFLTGAPTVLIAWFVSGFIYQ"
gene 41395..41766
/gene="srlB"
/locus_tag="DC465_RS08240"
/gene_synonym="gutB"
CDS 41395..41766
/gene="srlB"
/locus_tag="DC465_RS08240"
/gene_synonym="gutB"
/EC_number="2.7.1.198"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_708511.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="PTS glucitol/sorbitol transporter subunit IIA"
/protein_id="WP_000216201.1"
/translation="MTVIYQTTITRIGASATDALSDQMLITFREGAPADLEEYCFIHC
HGELKGALHPGLQFSLGQHRYPVTAVGSVAEDNLRELGHVTLRFDGLNEAEFPGTVHV
AGPVPDDIAPGSVLKFESVKE"
gene 41770..42549
/gene="srlD"
/locus_tag="DC465_RS08245"
CDS 41770..42549
/gene="srlD"
/locus_tag="DC465_RS08245"
/EC_number="1.1.1.140"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417185.1"
/GO_function="GO:0016491 - oxidoreductase activity
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="sorbitol-6-phosphate dehydrogenase"
/protein_id="WP_001077342.1"
/translation="MNQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQ
EINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYSAGIAKAAFISDFQL
GDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG
GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDK
VPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQVMF"
gene 42654..43013
/gene="gutM"
/locus_tag="DC465_RS08250"
CDS 42654..43013
/gene="gutM"
/locus_tag="DC465_RS08250"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417186.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="transcriptional regulator GutM"
/protein_id="WP_000252908.1"
/translation="MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVGR
SSGRFKPRVVVAIALDDQQRIVDTLFMKGLTVFARPQKIPAITGMHAGDLQPDVIFPH
DPLSQNALSLALKLKRG"
gene 43080..43853
/gene="srlR"
/locus_tag="DC465_RS08255"
/gene_synonym="gutR"
CDS 43080..43853
/gene="srlR"
/locus_tag="DC465_RS08255"
/gene_synonym="gutR"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417187.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="glucitol operon DNA-binding transcriptional
repressor SrlR"
/protein_id="WP_000804550.1"
/translation="MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILE
HAGTVIRTYGGVVLNKEESDPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGST
VLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENA
FEHFTFDKLFMGTDGIDLNAGVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNV
VCSLESVDKLITDAGIDPAFRQALEEKGIDVIITGESNE"
gene 43846..44811
/gene="gutQ"
/locus_tag="DC465_RS08260"
CDS 43846..44811
/gene="gutQ"
/locus_tag="DC465_RS08260"
/EC_number="5.3.1.13"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311591.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="arabinose-5-phosphate isomerase GutQ"
/protein_id="WP_001287415.1"
/translation="MSEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGK
VVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGA
KELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNT
LMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASV
MDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTL
QAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGII"
gene complement(44808..46322)
/gene="norR"
/locus_tag="DC465_RS08265"
CDS complement(44808..46322)
/gene="norR"
/locus_tag="DC465_RS08265"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311592.2"
/GO_function="GO:0003700 - DNA-binding transcription
factor activity [Evidence IEA]"
/GO_process="GO:0006355 - regulation of DNA-templated
transcription [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="nitric oxide reductase transcriptional regulator
NorR"
/protein_id="WP_000010774.1"
/translation="MSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALL
RYDSRQFIPLAIDGLAKDVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDGLI
PGQESLKVHACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNA
LLIEQLESQNMMPGDATPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETG
TGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFE
MADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREE
VLAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRLGLSRVVLSAGAR
NLLQHYRFPGNVRELEHAIHRAVVLSRATRNGDEVILEAQHFAFPEVTLPPPEAAAVP
VVKQNLREATEAFQRETIRQALAQNHHNWAACARMLETDVANLHRLAKRLGLKD"
gene 46509..47948
/gene="norV"
/locus_tag="DC465_RS08270"
CDS 46509..47948
/gene="norV"
/locus_tag="DC465_RS08270"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417190.1"
/GO_function="GO:0009055 - electron transfer activity
[Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA];
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016966
- nitric oxide reductase activity [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="anaerobic nitric oxide reductase
flavorubredoxin"
/protein_id="WP_048943254.1"
/translation="MSIVVKNNIHWVGQRDWEVRDFHGTEYKTLRGSSYNSYLIREEK
NVLIDTVDHKFSREFVQNLRNEIDLADIDYIVINHAEEDHAGALTELMAQIPDTPIYC
TANAIYSINGHHHHPEWNFNVVKTGDTLDIGNGKQLIFVETPMLHWPDSMMTYLTGDA
VLFSNDAFGQHYCDEHLFNDEVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNL
PVDMIATSHGVVWRDNPTQIVELYLKWAADYQEDRITIFYDTMSNNTRMMADAIAQGI
AETDPRVAVKIFNVARSDKNEILTNVFRSKGVLVGTSTMNNVMMPKIAGLVEEMTGLR
FRNKRASAFGSHGWSGGAVDRLSTRLQDAGFEMSLSLKAKWRPDQDALKLCREHGREI
ARQWALAPLPQSTVNTVVKEETSATTTADLGPRMQCSVCQWIYDPAKGEPMQDVAPGT
PWSEVPDNFLCPECSLGKDVFEELASEAK"
gene 47945..49078
/gene="norW"
/locus_tag="DC465_RS08275"
CDS 47945..49078
/gene="norW"
/locus_tag="DC465_RS08275"
/EC_number="1.18.1.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417191.1"
/GO_function="GO:0016731 - oxidoreductase activity, acting
on iron-sulfur proteins as donors, NAD or NADP as acceptor
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="NADH:flavorubredoxin reductase NorW"
/protein_id="WP_000064752.1"
/translation="MSNGIVIIGSGFAARQLVKNIRKQDATIPLTLIAADSMDEYNKP
DLSHVISQGQRADDLTRQTAGEFAEQFNLHLFPQTWVTDIDAEARVVKSQNNQWQYDK
LVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLIVGGGLIGSELAMDF
CRAGKAVTLIDNAASILASLMPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGIQA
TLDRQRNIEVDAVIAATGLRPETALARRAGLTINRGVCVDSYLQTSNTDIYALGDCAE
INGQVLPFLQPIQLSAMVLAKNLLGNNTPLKLPAMLVKIKTPELPLHLAGETQRQDLR
WQINTERQGMVARGVDDADQLRAFVVSEDRMKEAFGLLKTLPM"
gene complement(49206..51458)
/gene="hypF"
/locus_tag="DC465_RS08280"
CDS complement(49206..51458)
/gene="hypF"
/locus_tag="DC465_RS08280"
/EC_number="6.1.2.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417192.1"
/GO_function="GO:0003998 - acylphosphatase activity
[Evidence IEA]"
/GO_process="GO:0036211 - protein modification process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="carbamoyltransferase HypF"
/protein_id="WP_001107652.1"
/translation="MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGD
GVEVRLLEDPETFLVQLHQHCPPLARIDSVEREPFIWSQLPTEFTIRQSAGGAMNTQI
VPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAEFPLCP
ACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGNIVAI
KGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIV
LVDKKYVPELCDDIAPGLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISN
EQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLRRSRGYVPDALALPPGFKNVP
PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVV
HDAHPGYVSSQWAHEMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGE
NGALWGGECLRVNYRECEHLGGLPAVALAGGDLAAKQPWRNLLAQCLRFVPEWQNYPE
TASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEA
LAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMRE
QATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA
RWLAGEVQNG"
gene complement(51611..52138)
/gene="hydN"
/locus_tag="DC465_RS08285"
CDS complement(51611..52138)
/gene="hydN"
/locus_tag="DC465_RS08285"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311596.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="electron transport protein HydN"
/protein_id="WP_001078777.1"
/translation="MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRI
HVIKGVNISTATVCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYG
AMEVVVRPVIRNSGAGLNVRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKL
EQLSAEKRRRTALMF"
gene complement(52287..53297)
/gene="ascG"
/locus_tag="DC465_RS08290"
CDS complement(52287..53297)
/gene="ascG"
/locus_tag="DC465_RS08290"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417194.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator AscG"
/protein_id="WP_001392554.1"
/translation="MTTMLEVAKRAGVSKATVSRVLSGNGYVSQETKDRVFQAVEESG
YRPNLLARNLSAKSTQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHS
AEEERQAIQYLLDLRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRKNSSHSVW
CDHKQTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIA
NGKWTPASGAEGVEMLLERGAKFSALVASNDDMAIGAMKALHERGVAVPEQVSVIGFD
DIAIAPYTVPALSSVKIPVTEMIQEIIGRLIFMLDGGDFSPPKTFSGKLIRRDSLIAL
SR"
gene 53557..55014
/gene="ascF"
/locus_tag="DC465_RS08295"
CDS 53557..55014
/gene="ascF"
/locus_tag="DC465_RS08295"
/inference="COORDINATES: similar to AA
sequence:RefSeq:YP_026182.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/GO_function="GO:0008982 -
protein-N(PI)-phosphohistidine-sugar phosphotransferase
activity [Evidence IEA]"
/GO_process="GO:0009401 - phosphoenolpyruvate-dependent
sugar phosphotransferase system [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="PTS cellobiose/arbutin/salicin transporter
subunit IIBC"
/protein_id="WP_001107861.1"
/translation="MAKNYAALARSVIAALGGVDNISAVTHCMTRLRFVIKDDQLIDS
PTLKTIPGVLGVVRSDNQCQVIIGNTVSQAFQEVVSLLPGDMQPAQPVGKPKLTLRRI
GAGILDALIGTMSPLIPAIIGGSMVKLLAMILEMSGVLTKGSPTLTILNVIGDGAFFF
LPLMVAASAAIKFKTNMSLAIAIAGVLVHPSFIELMAKAAQGEHVEFALIPVTAVKYT
YTVIPALVMTWCLSYIERWVDRITPAVTKNFLKPMLIVLIAAPLAILLIGPIGIWIGS
AISALVYTIHGYLGWLSVAIMGALWPLLVMTGMHRVFTPTIIQTIAETGKEGMVMPSE
IGANLSLGGSSLAVAWKTKNPELRQTALAAAASAIMAGISEPALYGVAIRLKRPLIAS
LISGFICGAVAGMAGLASHSMAAPGLFTSVQFFDPANPMSIVWVFAVMALAVVLSFIL
TLLLGFEDIPVEEAAAQARKYQSVQPTVAKEVSLN"
gene 55023..56447
/gene="ascB"
/locus_tag="DC465_RS08300"
CDS 55023..56447
/gene="ascB"
/locus_tag="DC465_RS08300"
/EC_number="3.2.1.86"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417196.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="6-phospho-beta-glucosidase AscB"
/protein_id="WP_000110363.1"
/translation="MSVFPESFLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMA
VKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMAEMGFKVFRTSIAWSRLFPQGD
EITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRY
ARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASA
LATKIAHEVNPQNQVGCMLAGGNFYPYSCKPEDVWAALEKDRENLFFIDVQARGTYPA
YSARVFREKGVTINKAPGDDEILKNTVDFVSFSYYASRCASAEMNANNSSAANVVKSL
RNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDEFAANGEINDDYR
ISYLREHIRAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVFVDRDDAGNGT
LTRTRKKSFWWYKKVIASNGEDLE"
gene complement(56561..56980)
/locus_tag="DC465_RS08305"
CDS complement(56561..56980)
/locus_tag="DC465_RS08305"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001696729.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system HigA family
antitoxin"
/protein_id="WP_000126294.1"
/translation="MTANAARAVKATRELVNAVPFLGGSDSEDDYREALELVEYLIEE
DDTNPLIDFLASRIAEYENNNEKFAEFDKAVAAMPVGVALLRTLIDQHNLTYADLKNE
IGSKSLVSQILSGQRSLTISHIKALSARFGVKPEWFL"
gene complement(56977..57288)
/locus_tag="DC465_RS08310"
CDS complement(56977..57288)
/locus_tag="DC465_RS08310"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_016233494.1"
/GO_component="GO:0110001 - toxin-antitoxin complex
[Evidence IEA]"
/GO_function="GO:0004519 - endonuclease activity [Evidence
IEA]; GO:0016788 - hydrolase activity, acting on ester
bonds [Evidence IEA]; GO:0003723 - RNA binding [Evidence
IEA]"
/GO_process="GO:0090304 - nucleic acid metabolic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system HigB family
toxin"
/protein_id="WP_000547564.1"
/translation="MHIISKAPFEESARKYPNDALALQALYRVIKETDFSTPEEMRTA
FPNLDNFRYRNKWYVLDVGGNNLRVIAYINFVNKRFFVKHITNHAEYDKLTRYYRENK
E"
gene complement(57462..58223)
/locus_tag="DC465_RS08315"
CDS complement(57462..58223)
/locus_tag="DC465_RS08315"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001026455.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_001026446.1"
/translation="MNIRTGMCAFLLSLVLPAQATSFTEYLPMSDSEYAQKRALKPLL
TMPYDAEQTWHFRKVGVAGVTLEKMPNDDSEWQLNGKDRAGKSWSVPVGMLANIAGKG
QLYRADLDRNGIQDLVIWLPSTGNGLAPYAHLILMTFTREGRPCVFEPRGFYTASKTG
VDDLLDLQGNGHTQLLDMQFNSGYWITSLYQVKDAKWQRVHGWFGKLSYPALTRFTYT
PNRKLVLKPIAGRDPQTEDLAQTQRCLIKGDVLEG"
gene complement(58248..58718)
/gene="hycI"
/locus_tag="DC465_RS08320"
CDS complement(58248..58718)
/gene="hycI"
/locus_tag="DC465_RS08320"
/EC_number="3.4.23.51"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311600.1"
/GO_function="GO:0004190 - aspartic-type endopeptidase
activity [Evidence IEA]"
/GO_process="GO:0036211 - protein modification process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hydrogenase maturation peptidase HycI"
/protein_id="WP_000132961.1"
/translation="MTDVLLCVGNSMMGDDGAGPLLAEKCAAAPKGNWVVIDGGSAPE
NDIVAIRELRPTRLLIVDATDMGLNPGEIRIIDPDDIAEMFMMTTHNMPLNYLIDQLK
EDIGEVIFLGIQPDIVGFYYPMTQPIKDAVETVYQRLEGWEGNGGFAQLAVEEE"
gene complement(58711..59121)
/gene="hycH"
/locus_tag="DC465_RS08325"
CDS complement(58711..59121)
/gene="hycH"
/locus_tag="DC465_RS08325"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311601.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="formate hydrogenlyase assembly protein HycH"
/protein_id="WP_001291921.1"
/translation="MSEKVVFSQLSRKFIDENDATPAEAQQVVYYSLAIGHHLGVIDC
LEAALTCPWDEYLAWIATLEAGSEARRKMEGVPKYGEIVIDINHVPMLANAFDKARAA
QTSQQQEWSTMLLSMLHDIHQENAIYLMVRRLRD"
gene complement(59118..59885)
/gene="hycG"
/locus_tag="DC465_RS08330"
CDS complement(59118..59885)
/gene="hycG"
/locus_tag="DC465_RS08330"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311602.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="formate hydrogenlyase subunit HycG"
/protein_id="WP_000067399.1"
/translation="MSNLLGPRDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVD
CGGCNGCEIEIFATLSPLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQS
APDPKICISYGACGNSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMAL
GLLEQKIHARGPGEQDEQPAEILHGDMVQPLRVKVDREARRLAGYRYGRQIADDFLTQ
LGQGEEQVARWLEAENDPRLNEIVSHLNHVVEEARIR"
gene complement(59885..60427)
/gene="hycF"
/locus_tag="DC465_RS08335"
CDS complement(59885..60427)
/gene="hycF"
/locus_tag="DC465_RS08335"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311603.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="formate hydrogenlyase subunit HycF"
/protein_id="WP_000493792.1"
/translation="MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEQNPQQCIGCA
ACVNACPSNALTVETDLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQEYELAVWK
KEDFLQQSRFVLCSCRVCNRPFAVQKEIDYAIALLKHNGDSRAENHRESFETCPECKR
QKCLVPSDRIELTRHMKEAI"
gene complement(60437..62146)
/gene="hycE"
/locus_tag="DC465_RS08340"
CDS complement(60437..62146)
/gene="hycE"
/locus_tag="DC465_RS08340"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005130590.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="formate hydrogenlyase subunit HycE"
/protein_id="WP_001288134.1"
/translation="MSEEKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPE
VVEFLYYKQGGWLSVLFGNDERKLNGHYAVYYVLSMEKGTKCWVTVRVEVDANKPEYP
SVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPA
PTTDAETYEFINELGDKKNNVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHR
GMEKLAETRMGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILL
EVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIR
RDLLKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGP
MVRASGHARDTRADHPFVGYGLLPMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLD
NLPGGPLMVEGFTYIPHRFALGFAEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPT
LRYMLRGNTVSDAPLIIGSLDPCYSCTDRMTVVDVRKKKSKVVPYKELERYSIERKNS
PLK"
gene complement(62164..63087)
/gene="hycD"
/locus_tag="DC465_RS08345"
CDS complement(62164..63087)
/gene="hycD"
/locus_tag="DC465_RS08345"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417202.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="formate hydrogenlyase subunit HycD"
/protein_id="WP_000115199.1"
/translation="MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYR
DIFKLLGRQSVGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLY
LFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNI
TDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFG
VMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFEN
SMARLRLDITPRITWAGFGFAFLAFVSLLAA"
gene complement(63090..64916)
/gene="hycC"
/locus_tag="DC465_RS08350"
CDS complement(63090..64916)
/gene="hycC"
/locus_tag="DC465_RS08350"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417203.1"
/GO_function="GO:0008137 - NADH dehydrogenase (ubiquinone)
activity [Evidence IEA]"
/GO_process="GO:0042773 - ATP synthesis coupled electron
transport [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="formate hydrogenlyase subunit 3"
/protein_id="WP_001274389.1"
/translation="MSAISLINSGVAWFVAAAVLAFLFSFQKALSGWIAGIGGAVGSL
YTAAAGFTVLTGAVGVSGALSLVSYDVQISPLNAIWLITLGLCGLFVSLYNIDWHRHA
QVKCNGLQINMLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTSNSKEGKLWFALGRL
GTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWV
PQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGIALLVLGMITAFVGGL
YALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIALEQPALIALGLVGGLYHLLNHSL
FKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEW
VIYQSFFKLSNSGAFVARLLGPLLAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAEN
ATCAPLLMSVSVVALAICCVIGGVAAPWLLPMLSAAVPLPLEPANTTVSQPMITLLLI
ACPLLPFIIMAICKGDRLPSRSRGAAWVCGYDHEKSMVITAHGFAMPVKQALAPVLKL
RKWLNPVSLVPGWQCEGSALLFRRMALVELAVLVVIIVSRGA"
gene complement(64913..65524)
/gene="hycB"
/locus_tag="DC465_RS08355"
CDS complement(64913..65524)
/gene="hycB"
/locus_tag="DC465_RS08355"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417204.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="formate hydrogenlyase subunit HycB"
/protein_id="WP_114190504.1"
/translation="MNRFVIADSTLCIGCHTCEAACSETHRQHGLQSMPRLRVMLNEK
ESAQQLCHHCEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGS
RPLDIPANANTPKAPPAPPAPARVSTLLDWVPGIRAIAVKCDLCSFDEQGPACVRMCP
TKALHLVDNTDIARVSKRKRELTFNTDFGDLTLFQQAQSGEAK"
gene complement(65649..66110)
/gene="hycA"
/locus_tag="DC465_RS08360"
CDS complement(65649..66110)
/gene="hycA"
/locus_tag="DC465_RS08360"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311608.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="formate hydrogenlyase regulator HycA"
/protein_id="WP_000158056.1"
/translation="MTIWEISEKADYIAQRHRRLQDQWHIYCNSLVQGITLSKARLHH
AMSCAPDKELCFVLFEHFRIYVTLADGFNSHTIEYYVETKDGEDKQRIAQAQLSIDGM
IDGKVNIRDREQVLEHYLEKIAGVYDSLYTAIENNVPVNLSQLVKGQSPAA"
gene 66322..66672
/gene="hypA"
/locus_tag="DC465_RS08365"
CDS 66322..66672
/gene="hypA"
/locus_tag="DC465_RS08365"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311609.1"
/GO_function="GO:0008901 - ferredoxin hydrogenase activity
[Evidence IEA]"
/GO_process="GO:0036211 - protein modification process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hydrogenase maturation nickel metallochaperone
HypA"
/protein_id="WP_001299100.1"
/translation="MHEITLCQRALELIEQQAAKHGAKRVTGVWLKIGAFSCVETSSL
AFCFDLVCRGSVAEGCKLHLEEQEAECWCETCQQYVTLLTQRVRRCPQCHGDMLQIVA
DDGLQIRRIEIDQE"
gene 66676..67548
/gene="hypB"
/locus_tag="DC465_RS08370"
CDS 66676..67548
/gene="hypB"
/locus_tag="DC465_RS08370"
/EC_number="3.6.5.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417207.1"
/GO_function="GO:0003924 - GTPase activity [Evidence IEA];
GO:0016151 - nickel cation binding [Evidence IEA]"
/GO_process="GO:0051604 - protein maturation [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hydrogenase nickel incorporation protein HypB"
/protein_id="WP_000337674.1"
/translation="MCTTCGCGEGNLYIEGDEHNPHSAFRSAPFAPAARPKMKITGIK
APEFTPSQTEEGDLHYGHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRARFAAR
KQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQV
NTGKGCHLDAQMIAEAAPRLPLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEG
EDKPLKYPHMFAAASLMLLNKVDLLPYLNFDVEKCIACAREVNPEIEIILISATSGEG
MDQWLNWLETQRCA"
gene 67539..67811
/gene="hypC"
/locus_tag="DC465_RS08375"
CDS 67539..67811
/gene="hypC"
/locus_tag="DC465_RS08375"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311611.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hydrogenase 3 maturation protein HypC"
/protein_id="WP_000334881.1"
/translation="MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRV
GQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGEEK"
gene 67811..68932
/gene="hypD"
/locus_tag="DC465_RS08380"
CDS 67811..68932
/gene="hypD"
/locus_tag="DC465_RS08380"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_708530.1"
/GO_function="GO:0016530 - metallochaperone activity
[Evidence IEA]"
/GO_process="GO:0036211 - protein modification process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hydrogenase formation protein HypD"
/protein_id="WP_001212989.1"
/translation="MRFVDEYRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGH
THAIFKFGLDQLLPENVEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRV
PGKQGSLLQAKARGADVRIVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQ
AKARDVQNFYFFCQHITLIPTLRSLLEQPDNGIDAFLAPGHVSMVIGTNAYNFIASDF
HRPLVVAGFEPLDLLQGVVMLVEQKIAAHSKVENQYRRVVPDAGNLLAQQAIADVFCV
NGDSEWRGLGVIESSGVHLTPDYQRFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPH
QCPLFGNTCNPQTAFGALMVSSEGACAAWYQYRQQENEA"
gene 68929..69939
/gene="hypE"
/locus_tag="DC465_RS08385"
CDS 68929..69939
/gene="hypE"
/locus_tag="DC465_RS08385"
/EC_number="4.2.1.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417210.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hydrogenase maturation carbamoyl dehydratase
HypE"
/protein_id="WP_001059939.1"
/translation="MNNIQLAHGSGGQAMQQLINSLFMEAFANPWLAEQEDQARLDLA
QLVAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPRYLSCGFILEE
GLPMETLKAVVTSMAETARTAGIAIVTGDTKVVQRGAVDKLFINTAGMGAIPANIHWG
AQTLTAGDVLLVSGTLGDHGATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKA
LRDATRGGVNAVVHEFAAACGCGIELSEAALPVKPAVRGVCELLGLDALNFANEGKLV
IAVERNAAEQVLAALHSHPLGKDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPR
IC"
gene 70013..72091
/gene="flhA"
/locus_tag="DC465_RS08390"
CDS 70013..72091
/gene="flhA"
/locus_tag="DC465_RS08390"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311614.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA];
GO:0005515 - protein binding [Evidence IEA]; GO:0043565 -
sequence-specific DNA binding [Evidence IEA]; GO:0008134 -
transcription factor binding [Evidence IEA]"
/GO_process="GO:0006355 - regulation of DNA-templated
transcription [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="formate hydrogenlyase transcriptional activator
FlhA"
/protein_id="WP_001297144.1"
/translation="MSYTPMSDLGQQGLFDITRTLLQQPDLASLCEALSQLVKRSALA
DNAAIVLWQAQTQRASYYASREKDTPIKYEDETVLAHGPVRSILSRPDTLHCSYEEFC
ETWPQLAAGGLYPKFGHYCLMPLAAEGHIFGGCEFIRYDDRPWSEKEFNRLQTFTQIV
SVVTEQIQSRVVNNVDYELLCRERDNFRILVAITNAVLSRLDMDELVSEVAKEIHYYF
DIDDISIVLRSHRKNKLNIYSTHYLDKQHPAHEQSEVDEAGTLTERVFKSKEMLLINL
HERDDLAPYERMLFDTWGNQIQTLCLLPLMSGDTMLGVLKLAQCEEKVFTTTNLNLLR
QIAERVAIAVDNALAYQEIHRLKERLVDENLALTEQLNNVDSEFGEIIGRSEAMYSVL
KQVEMVAQSDSTVLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESDL
FGHERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSN
KIIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVFPIHLPPLRERPEDIPLLAKAF
TFKIARRLGRNIDSIPAETLRTLSNMEWPGNVRELENVIERAVLLTRGNVLQLSLPDI
VLPEPETPPAATVVAQEGEDEYQLIVRVLKETNGVVAGPKGAAQRLGLKRTTLLSRMK
RLGIDKSALI"
gene complement(72128..72481)
/gene="ygbA"
/locus_tag="DC465_RS08395"
CDS complement(72128..72481)
/gene="ygbA"
/locus_tag="DC465_RS08395"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_708533.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="nitrous oxide-stimulated promoter family
protein"
/protein_id="WP_000015499.1"
/translation="MSGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFVYAQKR
LDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLIDDKRP
VPELPEKYRPKKTRE"
gene complement(72558..72692)
/locus_tag="DC465_RS28865"
CDS complement(72558..72692)
/locus_tag="DC465_RS28865"
/inference="COORDINATES: similar to AA
sequence:RefSeq:YP_008439274.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_000611926.1"
/translation="MIPELIISGEEANGEFLMLVPGKMLFCSFCVMLMKQVRKIASVE
"
gene 72768..75329
/gene="mutS"
/locus_tag="DC465_RS08400"
CDS 72768..75329
/gene="mutS"
/locus_tag="DC465_RS08400"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311616.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA];
GO:0030983 - mismatched DNA binding [Evidence IEA]"
/GO_process="GO:0006298 - mismatch repair [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DNA mismatch repair protein MutS"
/protein_id="WP_001272924.1"
/translation="MSAIENFDAHTPMMQQYLRLKAQHPEILLFYRMGDFYELFYDDA
KRASQLLDISLTKRGASAGEPIPMAGIPYHAVENYLAKLVNQGESVAICEQIGDPATS
KGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEP
ADRETMAAELQRTNPAELLYAEDFAEMSLIEGRRGLRRRPLWEFEIDTARQQLNLQFG
TRDLVGFGVENAPRGLCAAGCLLQYAKDTQRTTLPHIRSITMEREQDSIIMDAATRRN
LEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQTIGALQDF
TAELQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELRAQLETVDSAPVQA
LREKMGEFAELRDLLERAIIDTPPVLVRDGGVIASGYNEELDEWRALADGATDYLERL
EVRERERTGLDTLKVGFNAVHGYYIQISRGQSHLAPINYMRRQTLKNAERYIIPELKE
YEDKVLTSKGKALALEKQLYEELFDLLLPHLEALQQSASALAELDVLVNLAERAYTLN
YTCPTFIDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYM
RQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILH
NATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKME
GVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELES
ISPNAAATQVDGTQMSLLSVPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV"
gene 75435..76091
/gene="pphB"
/locus_tag="DC465_RS08405"
CDS 75435..76091
/gene="pphB"
/locus_tag="DC465_RS08405"
/EC_number="3.1.3.16"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311617.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="protein-serine/threonine phosphatase"
/protein_id="WP_001141340.1"
/translation="MPSTRYQKINAHHYRHIWVVGDIHGEYQLLQSRLHQLSFYPETD
LLISTGDNIDRGPKSLNVLRLLNQPWFTSVKGNHEAMALDAFETGDGNMWLASGGDWF
FDLNDSEQQEAIDLLLKFHHLPHIIEITNDNIKYVIAHADYPGSEYLFGKEIAESELL
WPVDRVQKSLNGELQQINGADYFIFGHMMFDNIQTFANQIYIDTGTPKSGRLSFYKIK
"
gene complement(76142..76909)
/gene="ygbI"
/locus_tag="DC465_RS08410"
CDS complement(76142..76909)
/gene="ygbI"
/locus_tag="DC465_RS08410"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417215.2"
/GO_function="GO:0003700 - DNA-binding transcription
factor activity [Evidence IEA]"
/GO_process="GO:0006355 - regulation of DNA-templated
transcription [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional repressor YgbI"
/protein_id="WP_001297141.1"
/translation="MIPVERRQIILEMVAEKGIVSIAELTDRMNVSHMTIRRDLQKLE
QQGAVVLVSGGVQSPGRVAHEPSHQVKTALAMTQKAAIGKLAASLVQPGSCIYLDAGT
TTLAIAQHLIHMESLTVVTNDFVIANYLLDNSNCTIIHTGGAVCRENRSCVGEAAATM
LRSLMIDQAFISASSWSVRGISTPAEDKVTVKRAIASASRQRVLVCDATKYGQVATWL
ALPLSEFDQIITDDGLPESASRALAKQDLSLLVAKNE"
gene 77105..78013
/gene="ltnD"
/locus_tag="DC465_RS08415"
CDS 77105..78013
/gene="ltnD"
/locus_tag="DC465_RS08415"
/EC_number="1.1.1.411"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417216.1"
/GO_function="GO:0016616 - oxidoreductase activity, acting
on the CH-OH group of donors, NAD or NADP as acceptor
[Evidence IEA]"
/GO_process="GO:0005975 - carbohydrate metabolic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="L-threonate dehydrogenase"
/protein_id="WP_000847985.1"
/translation="MKTGSEFHVGIVGLGSMGMGAALSCVRAGLSTWGADLNSNACAT
LKEAGACGVSDNAATFAEKLDALLVLVVNAAQVKQVLFGETGVAQHLKPGTAVMVSST
IASADAQEIATALAGFDLEMLDAPVSGGAVKAANGEMTVMASGSDIAFERLAPVLEAV
AGKVYRIGAEPGLGSTVKIIHQLLAGVHIAAGAEAMALAARAGIPLDVMYDVVTNAAG
NSWMFENRMRHVVDGDYTPHSAVDIFVKDLGLVADTAKALHFPLPLASTALNMFTSAS
NAGYGKEDDSAVIKIFSGITLPGAKS"
gene 78010..79272
/gene="otnK"
/locus_tag="DC465_RS08420"
CDS 78010..79272
/gene="otnK"
/locus_tag="DC465_RS08420"
/EC_number="2.7.1.217"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001649192.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA];
GO:0016301 - kinase activity [Evidence IEA]"
/GO_process="GO:0005975 - carbohydrate metabolic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="3-oxo-tetronate kinase"
/protein_id="WP_000590392.1"
/translation="MIKIGVIADDFTGATDIASFLVENGLPTVQINGVPTGKMPEAID
ALVISLKTRSCPVVEATQQSLAALSWLQQQGCKQIYFKYCSTFDSTAKGNIGPVTDAL
MDALDTPFTVFSPALPVNGRTVYQGYLFVMNQLLAESGMRHHPVNPMTDSYLPRLVEA
QSTGRCGVVSAHVFEQGVDAVRQELARLQQEGYRYAVLDALTEHHLEIQGEALRDAPL
VTGGSGLAIGLARQWAQENGNQAREAGHPLAGRGVVLSGSCSQMTNRQVAHYRQIAPA
REVDVARCLSTETLAAYAHELAEWVLGQESVLAPLVFATASTDALAAIQQQYGAQKAS
QAVETLFSQLAARLAAEGVTRFIVAGGETSGVVTQSLGIKGFHIGPTISPGVPWVNAL
DKPVSLALKSGNFGDEAFFSRAQREFLS"
gene 79269..79907
/gene="ygbL"
/locus_tag="DC465_RS08425"
CDS 79269..79907
/gene="ygbL"
/locus_tag="DC465_RS08425"
/EC_number="4.1.2.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417218.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="aldolase"
/protein_id="WP_001278994.1"
/translation="MSDFAKVEQSLREEMTRIASSFFQRGYATGSAGNLSLLLPDGNL
LATPTGSCLGNLDPQRLSKVAADGEWLSGDKPSKEVLFHLALYRNNPRCKAVVHLHST
WSTALSCLQGLDSSNVIRPFTPYVVMRMGNVPLVPYYRPGDKRIAQDLAELAADNQAF
LLANHGPVVCGESLQEAANNMEELEETAKLIFILGDRPIRYLTAGEIAELRS"
gene 79912..80688
/gene="ygbM"
/locus_tag="DC465_RS08430"
CDS 79912..80688
/gene="ygbM"
/locus_tag="DC465_RS08430"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417219.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="HPr family phosphocarrier protein"
/protein_id="WP_001136918.1"
/translation="MPRFAANLSMMFTEVPFIERFAAARKAGFDAVEFLFPYDYSTLQ
IQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEYALALNCEQV
HVMAGVVPAGEDAERYRAVFIDNLRYAADRFALHGKRILVEALSPDVKPHYLFSSQYQ
ALAIVEEVARDNVFIQLDTFHAQKVDGNLTHLIRDYAGKYAHVQIAGLPDRHEPDDGE
INYPWLFRLFDEVGYQGWIGCEYKPRGLTEEGLGWFDAWR"
gene 80777..82141
/gene="ygbN"
/locus_tag="DC465_RS08435"
CDS 80777..82141
/gene="ygbN"
/locus_tag="DC465_RS08435"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417220.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/GO_function="GO:0015128 - gluconate transmembrane
transporter activity [Evidence IEA]"
/GO_process="GO:0035429 - gluconate transmembrane
transport [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="GntP family transporter"
/protein_id="WP_000104456.1"
/translation="MSTITLLCIALTGVIMLLLLVIKAKVQPFVALLLVSLLVALAAG
IPAGEVGKVMIAGMGGVLGSVTIIIGLGAMLGRMIEHSGGAESLANYFSRKLGDKRTI
AALTLAAFFLGIPVFFDVGFIILAPIIYGFAKVAKISPLKFGLPVAGIMLTVHVAVPP
HPGPVAAAGLLHADIGWLTIIGIAISIPVGIVGYFAAKIINKHQYAMSVEVLEQMQLA
PASEEGATKLSDKINPPGVALVTSLIVIPIAIIMAGTVSATLMPPSHPLLGTLQLIGS
PMVALMIALVLAFWLLALRRGWSLQHTSDIMGSALPTAAVVILVTGAGGVFGKVLVES
GVGKALANMLQMIDLPLLPAAFIISLALRASQGSATVAILTTGGLLSEAVMGLNPIQC
VLVTLAACFGGLGASHINDSGFWIVTKYLGLSVADGLKTWTVLTTILGFTGFLITWCV
WAVI"
gene complement(82235..83227)
/gene="rpoS"
/locus_tag="DC465_RS08440"
CDS complement(82235..83227)
/gene="rpoS"
/locus_tag="DC465_RS08440"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_000081498.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA];
GO:0003700 - DNA-binding transcription factor activity
[Evidence IEA]; GO:0016987 - sigma factor activity
[Evidence IEA]"
/GO_process="GO:0006352 - DNA-templated transcription
initiation [Evidence IEA]; GO:0006355 - regulation of
DNA-templated transcription [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="RNA polymerase sigma factor RpoS"
/protein_id="WP_048943255.1"
/translation="MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEE
LLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLV
VKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN
QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNER
ITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLAR
RFGLLGYEATTLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE"
gene complement(83290..84384)
/gene="nlpD"
/locus_tag="DC465_RS08445"
CDS complement(83290..84384)
/gene="nlpD"
/locus_tag="DC465_RS08445"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417222.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="murein hydrolase activator NlpD"
/protein_id="WP_306174120.1"
/translation="MSLVSLWLAGCSDTSNPPAPVSSVNGNAPANTNSGMLITPPPKM
GTTSTAQQPQIQPVQQPQIQATQQPQIQPVQPVAQQPVQMENGRIVYNRQYGNIPKGS
YSGSTYTVKKGDTLFYIAWITGNDFRDLAQRNNIQAPYALNVGQTLQVGNASGTPITG
GNAITQADAAEQGVVIKPAQNSTVAVASQPTITYSESSGEQSANKMLPNNKPTATTVT
APVTVPTASTTEPTVSSTSTSTPISTWRWPTEGKVIETFGASEGGNKGIDIAGSKGQA
IIATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQQEVKAGQKIATM
GSTGTSSTRLHFEIRYKGKSVNPLRYLPQR"
gene complement(84569..85195)
/gene="pcm"
/locus_tag="DC465_RS08450"
CDS complement(84569..85195)
/gene="pcm"
/locus_tag="DC465_RS08450"
/EC_number="2.1.1.77"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005130872.1"
/GO_function="GO:0004719 - protein-L-isoaspartate
(D-aspartate) O-methyltransferase activity [Evidence IEA]"
/GO_process="GO:0030091 - protein repair [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="protein-L-isoaspartate O-methyltransferase"
/protein_id="WP_000254708.1"
/translation="MVSRRVQALLDQLRAQGIQDEQVLNALAAVPREKFVDEAFEQKA
WDNIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCS
VERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMT
QLDEGGILVLPVGEEHQYLKRVRRRGGEFIIDTVEAVRFVPLVKGELA"
gene complement(85189..85950)
/gene="surE"
/locus_tag="DC465_RS08455"
CDS complement(85189..85950)
/gene="surE"
/locus_tag="DC465_RS08455"
/EC_number="3.1.3.5"
/EC_number="3.1.3.6"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311625.1"
/GO_function="GO:0008252 - nucleotidase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="5'/3'-nucleotidase SurE"
/protein_id="WP_001295182.1"
/translation="MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNS
LTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVI
YSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINV
PDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVD
EGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW"
gene complement(85931..86980)
/gene="truD"
/locus_tag="DC465_RS08460"
CDS complement(85931..86980)
/gene="truD"
/locus_tag="DC465_RS08460"
/EC_number="5.4.99.27"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417225.1"
/GO_function="GO:0009982 - pseudouridine synthase activity
[Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]"
/GO_process="GO:0001522 - pseudouridine synthesis
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="tRNA pseudouridine(13) synthase TruD"
/protein_id="WP_000568943.1"
/translation="MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHI
LVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLS
AFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYF
GAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQ
VVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQ
AAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVV
RELINTTGDYAHIAE"
gene complement(86977..87456)
/gene="ispF"
/locus_tag="DC465_RS08465"
CDS complement(86977..87456)
/gene="ispF"
/locus_tag="DC465_RS08465"
/EC_number="4.6.1.12"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311627.1"
/GO_function="GO:0008685 - 2-C-methyl-D-erythritol
2,4-cyclodiphosphate synthase activity [Evidence IEA]"
/GO_process="GO:0019288 - isopentenyl diphosphate
biosynthetic process, methylerythritol 4-phosphate pathway
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
synthase"
/protein_id="WP_001219242.1"
/translation="MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHAL
TDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQA
PKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK"
gene complement(87456..88166)
/gene="ispD"
/locus_tag="DC465_RS08470"
CDS complement(87456..88166)
/gene="ispD"
/locus_tag="DC465_RS08470"
/EC_number="2.7.7.60"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417227.1"
/GO_function="GO:0050518 - 2-C-methyl-D-erythritol
4-phosphate cytidylyltransferase activity [Evidence IEA]"
/GO_process="GO:0019288 - isopentenyl diphosphate
biosynthetic process, methylerythritol 4-phosphate pathway
[Evidence IEA]; GO:0008299 - isoprenoid biosynthetic
process [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase"
/protein_id="WP_000246138.1"
/translation="MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHA
LLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWV
LVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGL
WHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPE
DLALAEFYLTRTIHQENT"
gene complement(88185..88496)
/gene="ftsB"
/locus_tag="DC465_RS08475"
CDS complement(88185..88496)
/gene="ftsB"
/locus_tag="DC465_RS08475"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311629.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="cell division protein FtsB"
/protein_id="WP_000517476.1"
/translation="MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNA
KLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNN
R"
gene complement(88690..89013)
/gene="ygbE"
/locus_tag="DC465_RS08480"
CDS complement(88690..89013)
/gene="ygbE"
/locus_tag="DC465_RS08480"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417229.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF3561 family protein"
/protein_id="WP_001246104.1"
/translation="MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPML
IYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALF
MWLLG"
gene complement(89063..89668)
/gene="cysC"
/locus_tag="DC465_RS08485"
CDS complement(89063..89668)
/gene="cysC"
/locus_tag="DC465_RS08485"
/EC_number="2.7.1.25"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311631.1"
/GO_function="GO:0004020 - adenylylsulfate kinase activity
[Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]"
/GO_process="GO:0000103 - sulfate assimilation [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="adenylyl-sulfate kinase"
/protein_id="WP_001173673.1"
/translation="MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTV
AGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLV
VLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFT
GIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS"
gene complement(89668..91095)
/gene="cysN"
/locus_tag="DC465_RS08490"
CDS complement(89668..91095)
/gene="cysN"
/locus_tag="DC465_RS08490"
/EC_number="2.7.7.4"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417231.1"
/GO_function="GO:0005525 - GTP binding [Evidence IEA];
GO:0003924 - GTPase activity [Evidence IEA]"
/GO_process="GO:0006790 - sulfur compound metabolic
process [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="sulfate adenylyltransferase subunit CysN"
/protein_id="WP_048943256.1"
/translation="MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLI
GRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLNLALLVDGLQAEREQGITIDVAYRYF
STEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGI
KHLVVAINKMDLVDYSEKTFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSE
SMAWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQ
RVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAV
QSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNG
IGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSA
FELELNALVRRHFPHWGARDLLGDK"
gene complement(91097..92005)
/gene="cysD"
/locus_tag="DC465_RS08495"
CDS complement(91097..92005)
/gene="cysD"
/locus_tag="DC465_RS08495"
/EC_number="2.7.7.4"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005130891.1"
/GO_function="GO:0004781 - sulfate adenylyltransferase
(ATP) activity [Evidence IEA]"
/GO_process="GO:0000103 - sulfate assimilation [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="sulfate adenylyltransferase subunit CysD"
/protein_id="WP_000372108.1"
/translation="MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVML
HLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINP
FVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDP
KNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLE
RDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVST
TSERQGRVIDRDQAGSMELKKRQGYF"
gene 92257..93294
/gene="iap"
/locus_tag="DC465_RS08500"
CDS 92257..93294
/gene="iap"
/locus_tag="DC465_RS08500"
/EC_number="3.4.11.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311634.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="alkaline phosphatase isozyme conversion
aminopeptidase"
/protein_id="WP_000490426.1"
/translation="MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFF
PGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIA
AHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKN
TPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGV
KTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSV
EATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIM
LPLVKELAKAS"
repeat_region 93315..93892
/inference="COORDINATES: alignment:crt:1.2"
/inference="COORDINATES: alignment:pilercr:v1.02"
/rpt_family="CRISPR"
/rpt_type=direct
/rpt_unit_range=93376..93404
/rpt_unit_seq="cggtttatccccgctggcgcggggaacac"
gene complement(93989..94282)
/gene="cas2e"
/locus_tag="DC465_RS08505"
CDS complement(93989..94282)
/gene="cas2e"
/locus_tag="DC465_RS08505"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311635.1"
/GO_function="GO:0004521 - RNA endonuclease activity
[Evidence IEA]"
/GO_process="GO:0043571 - maintenance of CRISPR repeat
elements [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type I-E CRISPR-associated endoribonuclease
Cas2e"
/protein_id="WP_000063176.1"
/translation="MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIW
QQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ"
gene complement(94279..95202)
/gene="cas1e"
/locus_tag="DC465_RS08510"
CDS complement(94279..95202)
/gene="cas1e"
/locus_tag="DC465_RS08510"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311636.1"
/GO_function="GO:0004520 - DNA endonuclease activity
[Evidence IEA]; GO:0046872 - metal ion binding [Evidence
IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]"
/GO_process="GO:0051607 - defense response to virus
[Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat
elements [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type I-E CRISPR-associated endonuclease Cas1e"
/protein_id="WP_000144861.1"
/translation="MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHI
PVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQ
AKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKW
NGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYD
IADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFRSTKLTGKLIPLIEEVLAAGE
IEPPQPAPDMLPPAIPEPETLGDSGHRGRGG"
gene complement(95199..95849)
/gene="cas6e"
/locus_tag="DC465_RS08515"
CDS complement(95199..95849)
/gene="cas6e"
/locus_tag="DC465_RS08515"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_000281458.1"
/GO_function="GO:0003674 - molecular_function [Evidence
IEA]"
/GO_process="GO:0043571 - maintenance of CRISPR repeat
elements [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type I-E CRISPR-associated protein
Cas6/Cse3/CasE"
/protein_id="WP_000281446.1"
/translation="MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQ
FLYRREELQGAFRFFVLSQERPAESDTFTIECRSFAPELRTGQQLCFNLRANPTICKS
GKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQ
LRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA"
gene complement(95831..96577)
/gene="cas5e"
/locus_tag="DC465_RS08520"
CDS complement(95831..96577)
/gene="cas5e"
/locus_tag="DC465_RS08520"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311638.1"
/GO_function="GO:0003723 - RNA binding [Evidence IEA]"
/GO_process="GO:0051607 - defense response to virus
[Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat
elements [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type I-E CRISPR-associated protein Cas5/CasD"
/protein_id="WP_000085051.1"
/translation="MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGV
GIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTIQMPKEVRKARYFSRREELSDPD
LLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPL
APLLLEGNACDALCNAYQQYQDHFHKLKVSLPKLQDECWWEGEHDGLVASKILRRRDV
PLNRQQWLFGERTINQGPWLSKEEPCTSQE"
gene complement(96588..97643)
/gene="cas7e"
/locus_tag="DC465_RS08525"
CDS complement(96588..97643)
/gene="cas7e"
/locus_tag="DC465_RS08525"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311639.1"
/GO_function="GO:0003674 - molecular_function [Evidence
IEA]"
/GO_process="GO:0043571 - maintenance of CRISPR repeat
elements [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type I-E CRISPR-associated protein
Cas7/Cse4/CasC"
/protein_id="WP_000206443.1"
/translation="MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSL
KRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEEKKAIEWAAKIADYLGKAK
NDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLALLRKDRMAVD
IAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGE
TGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAY
ASWAMAEKGTEQPRSLAAAFYEPINGTRQLEVAVQRITTLRENMNTVYEQKTECASFD
VMNKQGSMKDVLDFICA"
gene complement(97655..98191)
/gene="casB"
/locus_tag="DC465_RS08530"
/gene_synonym="cse2"
CDS complement(97655..98191)
/gene="casB"
/locus_tag="DC465_RS08530"
/gene_synonym="cse2"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311640.1"
/GO_function="GO:0003674 - molecular_function [Evidence
IEA]"
/GO_process="GO:0043571 - maintenance of CRISPR repeat
elements [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type I-E CRISPR-associated protein Cse2/CasB"
/protein_id="WP_000029329.1"
/translation="MSIVKEEHKATLRKWHEELQEKRGERASLRRSTTVNDVCLTDGF
RLFLKNRQIKWQDEPEWRITALALIAAVSANVKAIDERQPFAAQLAAVMSKGRFTRLS
AVKTPDELLRQLRRAVRLLNGSVNLDSLAEGVFRWCQESDDLLNHHRRQQRPTEFIRI
RWALEYYQAGDADNEQNQ"
gene complement(98188..99750)
/gene="casA"
/locus_tag="DC465_RS08535"
/gene_synonym="cse1"
CDS complement(98188..99750)
/gene="casA"
/locus_tag="DC465_RS08535"
/gene_synonym="cse1"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311641.1"
/GO_function="GO:0003674 - molecular_function [Evidence
IEA]"
/GO_process="GO:0043571 - maintenance of CRISPR repeat
elements [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type I-E CRISPR-associated protein Cse1/CasA"
/protein_id="WP_001084084.1"
/translation="MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADL
QGAAWQFLLGLLQTSFAPKDHRRWDDIWEDGLEVEKLREALLSLEHAFQFGPDSPSFM
QDFEALTGDKVQVASLLPEIPGAQTTKFNKDHFIKRGVTEYLCPHCSALALFSLQLNA
PSGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKMWLNVMPQDEADLPLPKKFDD
LVFPWLGPTRTSELAGAVVTDDQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQNDA
LLSLMTTKNYGANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKS
ENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLNKKEGQIP
KLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRFVRQIE
EGQDADELLSKWNKEIWLFARQDFDERVFTNPYEPVNLERIMTARKKYFTTSAEKQSA
KAAREKKQEAAE"
gene complement(99848..102547)
/locus_tag="DC465_RS08540"
CDS complement(99848..102547)
/locus_tag="DC465_RS08540"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001233973.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="CRISPR-associated helicase/endonuclease Cas3"
/protein_id="WP_001233970.1"
/translation="MRKYPLSLLKDKNIVTFFDFWGKTRRGEKEGGDDYHLLCWHSLD
VAAMGYLMVKRNCFGLADYFRQLGISDKEQAAQFFAWLLCWHDIGKFARSFQQLYLPP
ELKIQEGARKNYEKISHSTLGYWLWNHYLSECQELLPSSSLSPRKLRRVIEMWMPVTT
GHHGRPPDRMDELDNFLPEDKAAARDFLLAIKALFPRIEIPAFWDDDEGIELIKHLSW
YISATVVLADWTGSSTRFFPRVAQAMDIKHYWQKALVQAQNALTVFPPKAETAPFTGI
NTLFPFIENPTPLQQKVLDLDISQPGPQLFILEDVTGAGKTEAALILAHRLIAAGKAQ
GLFFGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLV
GSEEPDEQTFSQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNK
ILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGAEGQ
QEAPLLGKDDYPWLTHVTKTDVHSHRVATRKEVERSVSVGWLHSEQECIARIESAVSQ
GKCIAWIRNSVDDAIKVYRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKE
DGSQRAGKVLICTQVLEQSVDCDLDEMISDLAPIDLLIQRAGRLQRHIRDINGQLKRD
GKDERSPPELLILAPVWDDSPGDEWFGSAMRNSAFVYPDHGRIWLTQRVLREQGAIQM
PHSARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRARAKKFVLNFRPGYAANINDY
LPEKLSTRLAEESVSLWLATCIDGVVKPYATGAHAWEMSVVRVRRSWWKKHRDEFSLL
EGDAFRQWCIEQRQDPEMANVILVTDDESCGYSAMEGLTGKVG"
gene complement(102741..102893)
/locus_tag="DC465_RS08545"
CDS complement(102741..102893)
/locus_tag="DC465_RS08545"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311643.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="Hok/Gef family protein"
/protein_id="WP_000956458.1"
/translation="MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVL
AYESKK"
gene complement(103158..103892)
/gene="cysH"
/locus_tag="DC465_RS08555"
CDS complement(103158..103892)
/gene="cysH"
/locus_tag="DC465_RS08555"
/EC_number="1.8.4.8"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_708560.2"
/GO_function="GO:0004604 - phosphoadenylyl-sulfate
reductase (thioredoxin) activity [Evidence IEA]"
/GO_process="GO:0019379 - sulfate assimilation,
phosphoadenylyl sulfate reduction by
phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="phosphoadenosine phosphosulfate reductase"
/protein_id="WP_000039842.1"
/translation="MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNL
PGEYVLSSSFGIQAAVSLHLVNQIHPDIPVILTDTGYLFPETYRFIDELTDKLKLNLK
VYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQ
SGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTT
RKWEPGMLEEETRFFGLKRECGLHEG"
gene complement(103966..105678)
/gene="cysI"
/locus_tag="DC465_RS08560"
CDS complement(103966..105678)
/gene="cysI"
/locus_tag="DC465_RS08560"
/EC_number="1.8.1.2"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001290736.1"
/GO_component="GO:0009337 - sulfite reductase complex
(NADPH) [Evidence IEA]"
/GO_function="GO:0051539 - 4 iron, 4 sulfur cluster
binding [Evidence IEA]; GO:0050661 - NADP binding
[Evidence IEA]; GO:0004783 - sulfite reductase (NADPH)
activity [Evidence IEA]"
/GO_process="GO:0008652 - amino acid biosynthetic process
[Evidence IEA]; GO:0000103 - sulfate assimilation
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="assimilatory sulfite reductase (NADPH)
hemoprotein subunit"
/protein_id="WP_001290706.1"
/translation="MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGF
KGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKF
AGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSN
PYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKT
TVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGY
LPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPI
RPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRI
TANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERF
LPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGN
RIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPAR
DLWD"
gene complement(105678..107477)
/gene="cysJ"
/locus_tag="DC465_RS08565"
CDS complement(105678..107477)
/gene="cysJ"
/locus_tag="DC465_RS08565"
/EC_number="1.8.1.2"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417244.1"
/GO_function="GO:0050660 - flavin adenine dinucleotide
binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence
IEA]; GO:0004783 - sulfite reductase (NADPH) activity
[Evidence IEA]"
/GO_process="GO:0019344 - cysteine biosynthetic process
[Evidence IEA]; GO:0000103 - sulfate assimilation
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="NADPH-dependent assimilatory sulfite reductase
flavoprotein subunit"
/protein_id="WP_000211954.1"
/translation="MTTQVPPSALLPLNPEQLVRLQAATTDLTPTQLAWVSGYFWGVL
NQQPAALAATPAPAAEMPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYK
FKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEF
FCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSV
ATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDAL
GVWYQNDPALVKELVELLWLKGDEPVTVEGKTLPLNEALQWHFELTVNTANIVENYAT
LTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIAS
SQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPAN
PETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKD
GVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQAL
LEVIAEFGGMDTEAADEFLSELRVERRYQRDVY"
gene 107796..108158
/gene="queD"
/locus_tag="DC465_RS08570"
CDS 107796..108158
/gene="queD"
/locus_tag="DC465_RS08570"
/EC_number="4.1.2.50"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_708563.2"
/GO_function="GO:0003824 - catalytic activity [Evidence
IEA]"
/GO_process="GO:0008616 - queuosine biosynthetic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="6-carboxytetrahydropterin synthase QueD"
/protein_id="WP_000108294.1"
/translation="MSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEV
DPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLL
SAVMVKETCTAGCIYRGE"
gene 108236..109507
/gene="ygcN"
/locus_tag="DC465_RS08575"
CDS 108236..109507
/gene="ygcN"
/locus_tag="DC465_RS08575"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417246.4"
/GO_function="GO:0016491 - oxidoreductase activity
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="FAD-dependent oxidoreductase"
/protein_id="WP_001295150.1"
/translation="MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNL
SGGRLYTHALAELLPQFHLTAPLERCITHESLSLLTPDGATTFSSLQPGGESWSVLRA
RFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVL
AERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGGICDDLPGGA
FLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVP
EGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHRE
PQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRTWPALMQDISRDLWDQGDKP
VPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL"
gene 109498..109758
/gene="ygcO"
/locus_tag="DC465_RS08580"
CDS 109498..109758
/gene="ygcO"
/locus_tag="DC465_RS08580"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417247.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ferredoxin family protein"
/protein_id="WP_000109532.1"
/translation="MSVARNLWRVADAPHIVPADSVERQTAERLISACPAGLFSLTPE
GDLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG"
gene 109775..110350
/gene="ygcP"
/locus_tag="DC465_RS08585"
CDS 109775..110350
/gene="ygcP"
/locus_tag="DC465_RS08585"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417248.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="glycerol-3-phosphate responsive antiterminator"
/protein_id="WP_001130266.1"
/translation="MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTIS
NIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGF
FCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVC
DEEDARNAINAGVVALSTTNTGVWTLAKKLL"
gene complement(110498..111358)
/gene="ygcQ"
/locus_tag="DC465_RS08590"
CDS complement(110498..111358)
/gene="ygcQ"
/locus_tag="DC465_RS08590"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417249.4"
/GO_function="GO:0009055 - electron transfer activity
[Evidence IEA]; GO:0050660 - flavin adenine dinucleotide
binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="electron transfer flavoprotein subunit
alpha/FixB family protein"
/protein_id="WP_001324446.1"
/translation="MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQV
LDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHW
GNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLIIVPGALPDWLVSTEDLKNV
TRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISG
HLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEA
LVTNIHADCQ"
gene complement(111355..112134)
/gene="ygcR"
/locus_tag="DC465_RS08595"
CDS complement(111355..112134)
/gene="ygcR"
/locus_tag="DC465_RS08595"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417250.4"
/GO_function="GO:0009055 - electron transfer activity
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="electron transfer flavoprotein subunit beta/FixA
family protein"
/protein_id="WP_001324445.1"
/translation="MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADE
QAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPE
FVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFI
TLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPA
MQCLQLARAEQRRGATLIDGQTVAEKAQKLWRDYLRQRMQP"
gene complement(112112..113521)
/gene="ygcS"
/locus_tag="DC465_RS08600"
CDS complement(112112..113521)
/gene="ygcS"
/locus_tag="DC465_RS08600"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_708568.1"
/GO_function="GO:0022857 - transmembrane transporter
activity [Evidence IEA]"
/GO_process="GO:0055085 - transmembrane transport
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="MFS transporter"
/protein_id="WP_000147666.1"
/translation="MTGRCLFGFSGEKPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRI
AALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWIS
DHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFS
PRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWG
TPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFN
SVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHR
KFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIR
SLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKA
LPLVAAGNVGGANEHSVSV"
gene complement(113543..114997)
/gene="ygcU"
/locus_tag="DC465_RS08605"
CDS complement(113543..114997)
/gene="ygcU"
/locus_tag="DC465_RS08605"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311656.1"
/GO_function="GO:0050660 - flavin adenine dinucleotide
binding [Evidence IEA]; GO:0016491 - oxidoreductase
activity [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="FAD-binding oxidoreductase"
/protein_id="WP_000059312.1"
/translation="MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHG
IYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDG
SAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRS
IGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITE
VTVKIFKFTPENNLFYGYILEDMKTGFNILREVMVEGYRPSIARLYDAEDGTQHFTHF
ADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVA
AERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQ
NGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWS
KLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK"
gene complement(115067..115852)
/gene="ygcW"
/locus_tag="DC465_RS08610"
CDS complement(115067..115852)
/gene="ygcW"
/locus_tag="DC465_RS08610"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417254.4"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="SDR family oxidoreductase"
/protein_id="WP_000021330.1"
/translation="MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGAN
IFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAASCERFGTVDILVNNA
GICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGG
QWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVL
DHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR"
gene 116171..117448
/gene="yqcE"
/locus_tag="DC465_RS08615"
CDS 116171..117448
/gene="yqcE"
/locus_tag="DC465_RS08615"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311658.1"
/GO_function="GO:0022857 - transmembrane transporter
activity [Evidence IEA]"
/GO_process="GO:0055085 - transmembrane transport
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="MFS transporter"
/protein_id="WP_001164578.1"
/translation="MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSN
TEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVML
CIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFS
RFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVL
RISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPL
GGIITTYSKVKSPTRVIQILSIIGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYAS
RGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWL
MGMAALGMVIVFTFLLFQKIRTADSAPAMASSK"
gene 117475..118953
/gene="ygcE"
/locus_tag="DC465_RS08620"
CDS 117475..118953
/gene="ygcE"
/locus_tag="DC465_RS08620"
/EC_number="2.7.1.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417256.1"
/GO_function="GO:0016301 - kinase activity [Evidence IEA];
GO:0016773 - phosphotransferase activity, alcohol group as
acceptor [Evidence IEA]"
/GO_process="GO:0005975 - carbohydrate metabolic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="FGGY-family carbohydrate kinase"
/protein_id="WP_000039683.1"
/translation="MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDAD
TAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLIS
WQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSED
AAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAG
LLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSW
LRDMLGESLIQDAKAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMI
GFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNYFAKHVIITGGGSNSDLFMQIFA
DVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFMPVESNAKRY
DAMNKGIFKDLTKHTDVILKKSYEVMHGELGNADSIQSWSNA"
repeat_region 119591..120107
/inference="COORDINATES: alignment:crt:1.2"
/inference="COORDINATES: alignment:pilercr:v1.02"
/rpt_family="CRISPR"
/rpt_type=direct
/rpt_unit_range=119652..119680
/rpt_unit_seq="cggtttatccccgctggcgcggggaactc"
gene complement(120447..121118)
/gene="queE"
/locus_tag="DC465_RS08625"
CDS complement(120447..121118)
/gene="queE"
/locus_tag="DC465_RS08625"
/EC_number="4.3.99.3"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001199960.1"
/GO_function="GO:0051539 - 4 iron, 4 sulfur cluster
binding [Evidence IEA]; GO:1904047 -
S-adenosyl-L-methionine binding [Evidence IEA]"
/GO_process="GO:0006400 - tRNA modification [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="7-carboxy-7-deazaguanine synthase QueE"
/protein_id="WP_001199979.1"
/translation="MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTW
EKLEDREVSLFSILAKTKESDKWGAASSEDLLAVISRQGYTARHVVITGGEPCIHDLL
PLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKH
PVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHK
YLNIA"
gene 121257..121397
/gene="yqcG"
/locus_tag="DC465_RS08630"
CDS 121257..121397
/gene="yqcG"
/locus_tag="DC465_RS08630"
/inference="COORDINATES: similar to AA
sequence:RefSeq:YP_002791252.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="cell envelope stress response protein YqcG"
/protein_id="WP_001288229.1"
/translation="MSEENKENGFNHVKTFTKIIFIFSVLVFNNNESKITDAAVNLFI
QI"
gene 121411..122283
/gene="ygcG"
/locus_tag="DC465_RS08635"
CDS 121411..122283
/gene="ygcG"
/locus_tag="DC465_RS08635"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417258.4"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="TPM domain-containing protein"
/protein_id="WP_001268446.1"
/translation="MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKEL
THKLESIFNNTQVQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIIVAWSD
RTVRIKVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAQGLELAINALNNQLTSQHQY
PTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDL
FLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGRSYHSDNSGSAGGSDSGGFSG
GGGSSGGGGASGRW"
gene complement(122343..123641)
/gene="eno"
/locus_tag="DC465_RS08640"
CDS complement(122343..123641)
/gene="eno"
/locus_tag="DC465_RS08640"
/EC_number="4.2.1.11"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311666.1"
/GO_component="GO:0000015 - phosphopyruvate hydratase
complex [Evidence IEA]"
/GO_function="GO:0000287 - magnesium ion binding [Evidence
IEA]; GO:0004634 - phosphopyruvate hydratase activity
[Evidence IEA]"
/GO_process="GO:0006096 - glycolytic process [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="phosphopyruvate hydratase"
/protein_id="WP_000036723.1"
/translation="MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTG
SREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTEN
KSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHA
DNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGS
NAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHF
LEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKG
IANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQI
KTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA"
gene complement(123729..125366)
/gene="pyrG"
/locus_tag="DC465_RS08645"
CDS complement(123729..125366)
/gene="pyrG"
/locus_tag="DC465_RS08645"
/EC_number="6.3.4.2"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005130912.1"
/GO_function="GO:0003883 - CTP synthase activity [Evidence
IEA]"
/GO_process="GO:0006221 - pyrimidine nucleotide
biosynthetic process [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="glutamine hydrolyzing CTP synthase"
/protein_id="WP_000210878.1"
/translation="MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPY
INVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRK
ERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQM
AVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPA
NERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEW
EQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVE
TRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARH
VANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVD
DSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPW
FVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK"
gene complement(125594..126385)
/gene="mazG"
/locus_tag="DC465_RS08650"
CDS complement(125594..126385)
/gene="mazG"
/locus_tag="DC465_RS08650"
/EC_number="3.6.1.9"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311668.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="nucleoside triphosphate pyrophosphohydrolase"
/protein_id="WP_001071648.1"
/translation="MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVL
DAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFAD
SSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWT
TLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQK
ANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL"
gene complement(126456..126791)
/gene="mazF"
/locus_tag="DC465_RS08655"
CDS complement(126456..126791)
/gene="mazF"
/locus_tag="DC465_RS08655"
/EC_number="3.1.27.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311669.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="endoribonuclease MazF"
/protein_id="WP_000254738.1"
/translation="MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTG
MCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLI
KAKINVLIG"
gene complement(126791..127039)
/gene="mazE"
/locus_tag="DC465_RS08660"
CDS complement(126791..127039)
/gene="mazE"
/locus_tag="DC465_RS08660"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311670.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system antitoxin MazE"
/protein_id="WP_000581937.1"
/translation="MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLII
EPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW"
gene complement(127117..129351)
/gene="relA"
/locus_tag="DC465_RS08665"
CDS complement(127117..129351)
/gene="relA"
/locus_tag="DC465_RS08665"
/EC_number="2.7.6.5"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311671.1"
/GO_process="GO:0015969 - guanosine tetraphosphate
metabolic process [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="GTP diphosphokinase"
/protein_id="WP_000226815.1"
/translation="MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQ
QTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKS
VVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHL
REVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLL
HERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDV
RAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTV
EIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGE
MLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVP
FTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAG
RQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNK
PSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGF
ITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRD
ITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARR
LHGS"
gene complement(129399..130700)
/gene="rlmD"
/locus_tag="DC465_RS08670"
CDS complement(129399..130700)
/gene="rlmD"
/locus_tag="DC465_RS08670"
/EC_number="2.1.1.190"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417265.1"
/GO_function="GO:0008173 - RNA methyltransferase activity
[Evidence IEA]"
/GO_process="GO:0006396 - RNA processing [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="23S rRNA (uracil(1939)-C(5))-methyltransferase
RlmD"
/protein_id="WP_000046838.1"
/translation="MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVSRHNGKTLFIPGL
LPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQR
SKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVK
QCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREK
LERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVA
RALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQ
NVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPA
TLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK"
gene 130757..133513
/gene="barA"
/locus_tag="DC465_RS08675"
CDS 130757..133513
/gene="barA"
/locus_tag="DC465_RS08675"
/EC_number="2.7.13.3"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311673.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/GO_function="GO:0000155 - phosphorelay sensor kinase
activity [Evidence IEA]"
/GO_process="GO:0000160 - phosphorelay signal transduction
system [Evidence IEA]; GO:0016310 - phosphorylation
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="two-component sensor histidine kinase BarA"
/protein_id="WP_000186448.1"
/translation="MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDA
GASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFH
LDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYI
ALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRR
GQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQN
VELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTI
ERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTL
NIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIR
DTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNR
GSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYS
PTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKL
KQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKL
IGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQ
QTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPE
VNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGL
VDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRNGTKEEDLEPELLELLDEMDNVAREAS
KILG"
gene complement(133745..135085)
/gene="gudD"
/locus_tag="DC465_RS08680"
CDS complement(133745..135085)
/gene="gudD"
/locus_tag="DC465_RS08680"
/EC_number="4.2.1.40"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311674.1"
/GO_function="GO:0008872 - glucarate dehydratase activity
[Evidence IEA]; GO:0000287 - magnesium ion binding
[Evidence IEA]"
/GO_process="GO:0019394 - glucarate catabolic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="glucarate dehydratase"
/protein_id="WP_000098234.1"
/translation="MSSQFTTPVVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIK
DNSGHTGVGEIPGGEKIRKTLEDAIPLVVGKTLGEYKNVLTLVRNTFADRDAGGRGLQ
TFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGDRKAT
PLPYQSQPDDSCDWYRLRHEEAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAE
SIVALAKRFPQARITLDPNGAWSLNEAIKIGKYLKGSLAYAEDPCGAEQGFSGREVMA
EFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGL
TWGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGLVQV
PEKPGLGVEIDMDQVMKAHELYQKHGLGARDDAMGMQYLIPGWTFDNKRPCMVR"
gene complement(135106..136446)
/gene="gudX"
/locus_tag="DC465_RS08685"
CDS complement(135106..136446)
/gene="gudX"
/locus_tag="DC465_RS08685"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_708582.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="enolase C-terminal domain-like protein"
/protein_id="WP_048943258.1"
/translation="MTTQSSPVITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTD
NAGHTGIGEAPGGEVIYQTLVDAIPMVLGQEVARLNKVVQQVHKGNQAADFDTFGKGA
WTFELRVNAVAALEAALLDLLGKALNVPVCELLGPGKQRETITVLGYLFYIGDRTKTD
LPYLENTPGNHEWYQLRHQKAMNSEAVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDT
VRALKKRFPDARITVDPNGAWLLDEAISLCKGLNDVLTYAEDPCGAEQGFSGREVMAE
FRRATGLPVATNMIATNWREMGHAVMLNAVDIPLADPHFWTLSGAVRVAQLCDDWGLT
WGCHSNNHFDISLAMFTHVGAAAPGNPTAIDTHWIWQEGDCRLTKNPLEIKNGKIAVP
DAPGLGVELDWEQVQKTHEAYKRLPGGARNDAGPMQYLIPGWTFDRKRPVFGRH"
gene complement(136448..137800)
/gene="gudP"
/locus_tag="DC465_RS08690"
CDS complement(136448..137800)
/gene="gudP"
/locus_tag="DC465_RS08690"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417269.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="galactarate/glucarate/glycerate transporter
GudP"
/protein_id="WP_000097082.1"
/translation="MSSLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGS
EMAKDIGLDPVGMGYVFSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWSMFTLLQ
GFVDIFSGFGIIVALFTLRFLVGLAEAPSFPGNSRIVAAWFPAQERGTAVSIFNSAQY
FATVIFAPIMGWLTHEVGWSHVFFFMGGLGIVISFIWLKVIHEPNQHPGVNQKELEYI
AAGGALINMDQQNTKVKVPFSVKWGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFP
VYLVQARGMSILKAGFVASVPAVCGFIGGVLGGIISDWLMRRTGSLNIARKTPIVMGM
LLSMVMVFCNYVNVEWMIIGFMALAFFGKGIGALGWAVMADTAPKEISGLSGGLFNMF
GNISGIVTPIAIGYIVGTTGSFNGALIYVGVHALIAVLSYLVLVGDIKRIELKPVAGQ
"
gene complement(138235..138684)
/gene="yqcA"
/locus_tag="DC465_RS08695"
CDS complement(138235..138684)
/gene="yqcA"
/locus_tag="DC465_RS08695"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311677.1"
/GO_function="GO:0010181 - FMN binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="flavodoxin"
/protein_id="WP_000807750.1"
/translation="MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDW
LPYQDKYVLVVTSTTGQGDLPDSIVPLFQGIKDSLGFQPNLRYGVIALGDSSYVNFCN
GGKQFDALLQEQSAQRVGEILLIDASENPEPETESNPWVEQWGTLLS"
gene complement(138702..139484)
/gene="truC"
/locus_tag="DC465_RS08700"
CDS complement(138702..139484)
/gene="truC"
/locus_tag="DC465_RS08700"
/EC_number="5.4.99.26"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417271.1"
/GO_function="GO:0009982 - pseudouridine synthase activity
[Evidence IEA]"
/GO_process="GO:0001522 - pseudouridine synthesis
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="tRNA pseudouridine(65) synthase TruC"
/protein_id="WP_000890008.1"
/translation="MLEILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIG
QHVFTAHRLDRPTSGVLLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDY
PLVEELDKIADKFAREDKGSQPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGR
KHQLRRHLAHLRHPIIGDSKHGDLRQNRSGAEHFGLQRLMLHASQLSLTHPFTGEPLT
IHAGLDDTWMQALSQFGWRGLLPENERVEFSAPSGQDGEISS"
gene complement(139484..139813)
/gene="yqcC"
/locus_tag="DC465_RS08705"
CDS complement(139484..139813)
/gene="yqcC"
/locus_tag="DC465_RS08705"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417272.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="YqcC family protein"
/protein_id="WP_000206990.1"
/translation="MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDT
MEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDA
LFADDAS"
gene complement(140435..140980)
/gene="syd"
/locus_tag="DC465_RS08710"
CDS complement(140435..140980)
/gene="syd"
/locus_tag="DC465_RS08710"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417273.1"
/GO_component="GO:0009898 - cytoplasmic side of plasma
membrane [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="SecY-interacting protein"
/protein_id="WP_000342431.1"
/translation="MDDLTAQALKDFTARYCDAWHEEHKSWPLSEELYGVPSPCIIST
TEDAVYWQPQPFTGEQNVNAVERAFDIVIQPTIHTFYTTQFAGDMHAQFGDIKLTLLQ
TWSEDDFRRVQENLIGHLVTQKRLKLPPTLFIATLEEELEVISVCNLSGEVCKETLGT
RKRTHLASNLAEFLNQLKPLL"
gene 141048..141896
/gene="queF"
/locus_tag="DC465_RS08715"
CDS 141048..141896
/gene="queF"
/locus_tag="DC465_RS08715"
/EC_number="1.7.1.13"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_708588.1"
/GO_function="GO:0043867 - 7-cyano-7-deazaguanine
tRNA-ribosyltransferase activity [Evidence IEA];
GO:0033739 - preQ1 synthase activity [Evidence IEA]"
/GO_process="GO:0008616 - queuosine biosynthetic process
[Evidence IEA]"
/note="Catalyzes the NADPH-dependent reduction of
7-cyano-7-deazaguanine (preQ0) to
7-aminomethyl-7-deazaguanine (preQ1) in queuosine
biosynthesis; Derived by automated computational analysis
using gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="NADPH-dependent 7-cyano-7-deazaguanine reductase
QueF"
/protein_id="WP_000100407.1"
/translation="MSSYANHQALAGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGL
KADNLPFHGTDIWTLYELSWLNAKGLPQVAVGHVEFDYTSVNLIESKSFKLYLNSFNQ
TRFNNWDEVRQTLERDLSTCAQGKVSVALYRLDELEGQPIGHFNGTCIDDQDITIDNY
EFTTDYLENATSGEKVVEETLVSHLLKSNCLITHQPDWGSIQIQYRGRQIDREKLLRY
LVSFRHHNEFHEQCVERIFNDLLRFCQPEKLSVYARYTRRGGLDINPWRSNSDFVPST
TRLVRQ"
gene 142008..143372
/gene="ppnN"
/locus_tag="DC465_RS08720"
CDS 142008..143372
/gene="ppnN"
/locus_tag="DC465_RS08720"
/EC_number="3.2.2.10"
/EC_number="3.2.2.4"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311682.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="nucleotide 5'-monophosphate nucleosidase PpnN"
/protein_id="WP_000627995.1"
/translation="MITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNS
GSLTDNSKELLSRFENFDINVLRRERGVKLELINPPEEAFVDGRIIRALQANLFAVLR
DILFVYGQIHNTVRFPNLNLDNSVHITNLVFSILRNARALHVGEAPNMVVCWGGHSIN
ENEYLYARRVGNQLGLRELNICTGCGPGAMEAPMKGAAVGHAQQRYKDSRFIGMTEPS
IIAAEPPNPLVNELIIMPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPA
NKDQVLPLILTGPKESADYFRVLDEFVVHTLGENARRHYRIIIDDAAEVARQMKKSMP
LVKENRRDTGDAYSFNWSMRIAPDLQMPFEPSHENMANLKLYPDQPVEVLAADLRRAF
SGIVAGNVKEVGIRAIEEFGPYKINGDKEIMRRMDDLLQGFVAQHRMKLPGSAYIPCY
EICT"
gene 143929..145218
/gene="sdaC"
/locus_tag="DC465_RS08725"
CDS 143929..145218
/gene="sdaC"
/locus_tag="DC465_RS08725"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311683.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="HAAAP family serine/threonine permease SdaC"
/protein_id="WP_000450476.1"
/translation="METTQTSTIASKDSRSAWRKTDTMWMLGLYGTAIGAGVLFLPIN
AGVGGMIPLIIMAILAFPMTFFAHRGLTRFVLSGKNPGEDITEVVEEHFGIGAGKLIT
LLYFFAIYPILLVYSVAITNTVESFMSHQLGMTPPPRAILSLILIVGMMTIVRFGEQM
IVKAMSILVFPFVGVLMLLALYLIPQWNGAALETLSLDTASATGNGLWMTLWLAIPVM
VFSFNHSPIISSFAVAKREEYGDMAEQKCSKILAFAHIMMVLTVMFFVFSCVLSLTPA
DLAAAKEQNISILSYLANHFNAPVIAWMAPIIAIIAITKSFLGHYLGAREGFNGMVIK
SLRGKGKSIEINKLNRITALFMLVTTWIVATLNPSILGMIETLGGPIIAMILFLMPMY
AIQKVPAMRKYSGHISNVFVVVMGLIAISAIFYSLFS"
gene 145276..146643
/gene="sdaB"
/locus_tag="DC465_RS08730"
CDS 145276..146643
/gene="sdaB"
/locus_tag="DC465_RS08730"
/EC_number="4.3.1.17"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_708592.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="L-serine ammonia-lyase II"
/protein_id="WP_000626396.1"
/translation="MISVFDIFKIGIGPSSSHTVGPMKAGKQFTDDLIARNLLKDVTR
VVVDVYGSLSLTGKGHHTDIAIIMGLAGNLPDTVDIDSIPGFIQDVNTHGRLMLANGQ
HEVEFPVDQCMNFHADNLSLHENGMRITALAGDKVIYSQTYYSIGGGFIVDEEHFGQQ
DSAPVEVPYPYSSAADLQKHCQETGLSLSGLMMKNELALHSKEELEQHLANVWEVMRG
GIERGISTEGVLPGKLRVPRRAAALRRMLVSQDKTTTDPMAVVDWINMFALAVNEENA
AGGRVVTAPTNGACGIIPAVLAYYDKFIREVNANSLARYLLVASAIGSLYKMNASISG
AEVGCQGEVGVACSMAAAGLAELLGASPAQVCIAAEIAMEHNLGLTCDPVAGQVQVPC
IERNAIAAVKAVNAARMALRRTSEPRVCLDKVIETMYETGKDMNAKYRETSRGGLAMK
IVACD"
gene 146755..147510
/gene="xni"
/locus_tag="DC465_RS08735"
CDS 146755..147510
/gene="xni"
/locus_tag="DC465_RS08735"
/EC_number="3.1.-.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417278.4"
/GO_function="GO:0017108 - 5'-flap endonuclease activity
[Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0033567 - DNA replication, Okazaki
fragment processing [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="flap endonuclease Xni"
/protein_id="WP_001374788.1"
/translation="MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTH
AVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNE
ADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGV
QPQQLPDYWGLAGISSSKVPGVVGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKL
ETHKEMAFLCRDIARLQTDLHIDGNLQQLRLVR"
gene complement(147565..148713)
/gene="fucO"
/locus_tag="DC465_RS08740"
CDS complement(147565..148713)
/gene="fucO"
/locus_tag="DC465_RS08740"
/EC_number="1.1.1.77"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417279.2"
/GO_function="GO:0016491 - oxidoreductase activity
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="lactaldehyde reductase"
/protein_id="WP_000013588.1"
/translation="MANRMILNETAWFGRGAVGALTDEVKRRGYQKALIVTDKTLVQC
GVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDT
CKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAEVTINYVITDEEKRR
KFVCVDPHDIPQVAFIDADMMDGMPPALKAATGVDALTHAIEGYITRGAWALTDALHI
KAIEIIAGALRGSVAGDKDAGEEMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPH
GVANAILLPHVMRYNADFTGEKYRDIARVMGVKVEGMSLEEARNAAVEAVFALNRDVG
IPPHLRDVGVRKEDIPALAQAALDDVCTGGNPREATLEDIVELYHTAW"
gene complement(148741..149388)
/gene="fucA"
/locus_tag="DC465_RS08745"
CDS complement(148741..149388)
/gene="fucA"
/locus_tag="DC465_RS08745"
/EC_number="4.1.2.17"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311687.1"
/GO_function="GO:0008738 - L-fuculose-phosphate aldolase
activity [Evidence IEA]; GO:0008270 - zinc ion binding
[Evidence IEA]"
/GO_process="GO:0006004 - fucose metabolic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="L-fuculose-phosphate aldolase"
/protein_id="WP_000440775.1"
/translation="MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQDGMLITPTG
IPYEKLTESHIVFIDGNGKHEEGKLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVS
ILNRPIPAIHYMIAAAGGNSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIAC
EVNLEKALWLAHEVEVLAQLYLTTLAITDPVPVLSDEEIAVVLEKFKTYGLRIEE"
gene 149935..151251
/gene="fucP"
/locus_tag="DC465_RS08750"
CDS 149935..151251
/gene="fucP"
/locus_tag="DC465_RS08750"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417281.1"
/GO_function="GO:0015150 - fucose transmembrane
transporter activity [Evidence IEA]"
/GO_process="GO:0015756 - fucose transmembrane transport
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="L-fucose:H+ symporter permease"
/protein_id="WP_000528603.1"
/translation="MGNTSIQTQSYRAVDKDAGQSRSYIIPFALLCSLFFLWAVANNL
NDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYA
LGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQT
FNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAI
VLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTA
CWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALI
AMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIVMTII
GGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIFARFRSQTATN"
gene 151284..153059
/gene="fucI"
/locus_tag="DC465_RS08755"
CDS 151284..153059
/gene="fucI"
/locus_tag="DC465_RS08755"
/EC_number="5.3.1.25"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417282.1"
/GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
/GO_function="GO:0008736 - L-fucose isomerase activity
[Evidence IEA]; GO:0030145 - manganese ion binding
[Evidence IEA]"
/GO_process="GO:0019317 - fucose catabolic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="L-fucose isomerase"
/protein_id="WP_048943259.1"
/translation="MKKISLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLTEK
LRHACGAAVECVISDTCIAGMAEAAACEEKFSSQNVGLTITVTPCWCYGSETIDMDPT
RPKAIWGFNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLL
RFARAGLAVASMKGKSYLSLGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRID
QKIYDEAELEMALAWADKNFRYGEDENNKQYQRNAEQSRAVLRESLLMAMCIRDMMQG
NSKLADIGRVEESLGYNAIAAGFQGQRHWTDQYPNGDTAEAILNSSFDWNGVREPFVV
ATENDSLNGVAMLMGHQLTGTAQVFADVRTYWSPEAIERVTGHKLDGLAEHGIIHLIN
SGSAALDGSCKQRDSEGNPTMKPHREISQKEADACLAATEWCPAIHEYFRGGGYSSRF
LTEGGVPFTMTRVNIIKGLGPVLQIAEGWSVELPKDVHDILNKRTNSTWPTTWFAPRL
TGKGPFTDVYSVMANWGANHGVLTIGHVGADFITLASMLRIPVCMHNVEETKVYRPSA
WAAHGMDIEGQDYRACQNYGPLYKR"
gene 153168..154586
/gene="fucK"
/locus_tag="DC465_RS08760"
CDS 153168..154586
/gene="fucK"
/locus_tag="DC465_RS08760"
/EC_number="2.7.1.51"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417283.2"
/GO_function="GO:0008737 - L-fuculokinase activity
[Evidence IEA]"
/GO_process="GO:0042355 - L-fucose catabolic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="L-fuculokinase"
/protein_id="WP_000808373.1"
/translation="MKQEVILVLDCGATNVRAIAVNRQGKIVARASTPNASDIAMENN
TWHQWSLDAILQRFADCCRQINSELTECHIRGIAVTTFGVDGALVDKQGNLLYPIISW
KCPRTAAVMDNIEQLISAQRLQAISGVGAFSFNTLYKLVWLKENHPQLLERAHAWLFI
SSLINHRLTGEFTTDITMAGTSQMLDIQQRDFSPQILQATGIPRRLFPRLVEAGEQIG
TLQNSAAAMLGLPVGIPVISAGHDTQFALFGAGADQNEPVLSSGTWEILMVRSAQVDT
SLLSQYAGSTCELDSQAGLYNPGMQWLASGVLEWVRKLFWTAETPWQMLIEEARLIAP
GADGVKMQCDLLSCQNAGWQGVTLNTTRGHFYRAALEGLTAQLQRNLQLLEKIGHFKA
SELLLVGGGSRNTLWNQIKANMLDIPVKVLDDAETTVAGAALFGWYGVGEFNSPEEAR
AQIHYQYRYFYPQTEPEFIEEV"
gene 154588..155010
/gene="fucU"
/locus_tag="DC465_RS08765"
CDS 154588..155010
/gene="fucU"
/locus_tag="DC465_RS08765"
/EC_number="5.1.3.29"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311691.1"
/GO_function="GO:0042806 - fucose binding [Evidence IEA];
GO:0016854 - racemase and epimerase activity [Evidence
IEA]"
/GO_process="GO:0042354 - L-fucose metabolic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="L-fucose mutarotase"
/protein_id="WP_000920840.1"
/translation="MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIR
ADGLLVSDLLQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDI
IRINRFAFYERAQKAFAIVITGERAKYGNILLKKGVTP"
gene 155068..155799
/gene="fucR"
/locus_tag="DC465_RS08770"
CDS 155068..155799
/gene="fucR"
/locus_tag="DC465_RS08770"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417285.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="L-fucose operon activator"
/protein_id="WP_000642344.1"
/translation="MKAARQQAIVDLLLNHTSLTTEALSEQLKVSKETIRRDLNELQT
QGKILRNHGRAKYIHRQNQDSGDPFHIRLKSHYAHKADIAREALAWIEEGMVIALDAS
STCWYLARQLPDINIQVFTNSHPICHELGKRERIQLISSGGTLERKYGCYVNPSLISQ
LKSLEIDLFIFSCEGIDSSGALWDSNAINADYKSMLLKRAAQSLLLIDKSKFNRSGEA
RIGHLDEVTHIISDERQVATSLVTA"
gene complement(155843..156943)
/gene="rlmM"
/locus_tag="DC465_RS08775"
CDS complement(155843..156943)
/gene="rlmM"
/locus_tag="DC465_RS08775"
/EC_number="2.1.1.186"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010435097.1"
/GO_function="GO:0008168 - methyltransferase activity
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="23S rRNA (cytidine(2498)-2'-O)-methyltransferase
RlmM"
/protein_id="WP_001045520.1"
/translation="MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENAGYVIY
ECYQPDDGDKLIRELPFSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGVVEKGGE
LRVEVADTNESKELLKFCRKFTVPLRAALRDAGVLANYETPKRPVVHVFFIAPGCCYT
GYSYSNNNSPFYMGIPRLKFPADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDL
GACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVC
DMVEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINA
QIQARQLYHDREEVTVHVRRIWAAVGGRRDER"
gene complement(156936..157331)
/gene="ygdD"
/locus_tag="DC465_RS08780"
CDS complement(156936..157331)
/gene="ygdD"
/locus_tag="DC465_RS08780"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311694.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF423 domain-containing protein"
/protein_id="WP_000203905.1"
/translation="MTSRFMLIFAAISGFIFVALGAFGAHVLSKTMGAVEMGWIQTGL
EYQAFHTLAILGLAVAMQRRISIWFYWSSVFLALGTVLFSGSLYCLALSHLRLWAFVT
PVGGVSFLAGWALMLVGAIRLKRKGVSHE"
gene complement(157350..158267)
/gene="gcvA"
/locus_tag="DC465_RS08785"
CDS complement(157350..158267)
/gene="gcvA"
/locus_tag="DC465_RS08785"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005130970.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="glycine cleavage system transcriptional
regulator GcvA"
/protein_id="WP_000044401.1"
/translation="MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSL
EDFLGLKLFRRRNRSLLLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLP
SFAIHWLVPRLSSFNSAYPGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKL
YAEYLLPVCSPLLLTGEKPLKTPEDLAKHTLLHDASRRDWQTYTRQLGLNHINVQQGP
IFSHSAMVLQAAIHGQGVALANNVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQA
ELGKIAAFRQWILAKAAAEQEKFRFRYEQ"
gene complement(158618..158845)
/gene="ygdI"
/locus_tag="DC465_RS08790"
CDS complement(158618..158845)
/gene="ygdI"
/locus_tag="DC465_RS08790"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417289.2"
/GO_component="GO:0005886 - plasma membrane [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="YgdI/YgdR family lipoprotein"
/protein_id="WP_000750398.1"
/translation="MKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTD
NDTGMISYKDANGNKQQINRTDVKEMVELDQ"
gene 159037..160242
/gene="csdA"
/locus_tag="DC465_RS08795"
CDS 159037..160242
/gene="csdA"
/locus_tag="DC465_RS08795"
/EC_number="3.13.1.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417290.1"
/GO_function="GO:0031071 - cysteine desulfurase activity
[Evidence IEA]; GO:0030170 - pyridoxal phosphate binding
[Evidence IEA]"
/GO_process="GO:0006534 - cysteine metabolic process
[Evidence IEA]; GO:0016226 - iron-sulfur cluster assembly
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="cysteine desulfurase CsdA"
/protein_id="WP_001356254.1"
/translation="MNVFNPAQFRAQFPALQDAGVYLDSAATALKPEAVVEATRQFYS
LSAGNVHRSQFAEAQRLTARYEAAREKVAQLLNAPDDKTIVWTRGTTESINMVAQCYA
RPRLQLGDEIIVSVAEHHANLVPWLMVAQQTGAKVVKLPLNAQRLPDVDLLPELITPR
SRILALGQMSNVTGGCPDLARAITFAHSAGMVVMVDGAQGAVHFPADVQQLDIDFYAF
SGHKLYGPTGIGVLYGKSELLEAMSPWLGGGKMIHEVSFDGFTTQSAPWKLEAGTPNV
AGVIGLSAALEWLADYDINQAESWSRSLATLAEDALAKRPGFRSFRCQDSSLLAFDFA
GVHHSDMVTLLAEYGIALRAGQHCAQPLLAELGVTGTLRASFAPYNTKSDVDALVNAV
DRALELLVD"
gene 160242..160685
/gene="csdE"
/locus_tag="DC465_RS08800"
CDS 160242..160685
/gene="csdE"
/locus_tag="DC465_RS08800"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311698.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="cysteine desulfurase sulfur acceptor subunit
CsdE"
/protein_id="WP_000184249.1"
/translation="MTNPQFAGHPFGTTVTAETLRNTFAPLSQWEDKYRQLIMLGKQL
PALPDELKAQAKEIAGCENRVWLGYTVAENGKMHFFGDSEGRIVRGLLAVLLTAVEGK
TAAELQAQSPLALFDELGLRGQLSASRSQGLNALSEAIIAATKQV"
gene complement(160736..161542)
/gene="tcdA"
/locus_tag="DC465_RS08805"
CDS complement(160736..161542)
/gene="tcdA"
/locus_tag="DC465_RS08805"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_708606.1"
/GO_function="GO:0008641 - ubiquitin-like modifier
activating enzyme activity [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="tRNA cyclic N6-threonylcarbamoyladenosine(37)
synthase TcdA"
/protein_id="WP_000117734.1"
/translation="MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSW
AAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAKVMAERIRQINPECRV
TVVDDFVTPDNVAQYMSAGYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQID
PTQIQVTDLAKTIQDPLAAKLRERLKSDFGVVKNSKGKLGVDCVFSTEALVYPQSDGT
VCAMKATAEGPKRMDCASGFGAATMVTATFGFVAVSHALKKMMAKAARQG"
gene complement(161781..162878)
/gene="mltA"
/locus_tag="DC465_RS08810"
CDS complement(161781..162878)
/gene="mltA"
/locus_tag="DC465_RS08810"
/EC_number="4.2.2.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008785702.1"
/GO_component="GO:0019867 - outer membrane [Evidence IEA]"
/GO_function="GO:0004553 - hydrolase activity, hydrolyzing
O-glycosyl compounds [Evidence IEA]"
/GO_process="GO:0009254 - peptidoglycan turnover [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="murein transglycosylase A"
/protein_id="WP_000678646.1"
/translation="MKGRWVKYLLMGTVVAMLAACSSKPTDRGQQYKDGKFTQPFSLV
NQPDAVGAPINAGDFAEQINHIRNSSPRLYGNQSNVYNAVQEWLRAGGDTRNMRQFGI
DAWQMEGADNYGNVQFTGYYTPVIQARHTRQGEFQYPIYRMPPKRGRLPSRAEIYAGA
LSDKYILAYSNSLMDNFIMDVQGSGYIDFGDGSPLNFFSYAGKNGHAYRSIGKVLIDR
GEVKKEDMSMQAIRHWGETHSEAEVRELLEQNPSFVFFKPQSFAPVKGASAVPLVGRA
SVASDRSIIPPGTTLLAEVPLLDNNGKFNGQYELRLMVALDVGGAIKGQHFDIYQGIG
PEAGHRAGWYNHYGRVWVLKTAPGAGNVFSG"
gene 163087..163163
/locus_tag="DC465_RS08820"
tRNA 163087..163163
/locus_tag="DC465_RS08820"
/product="tRNA-Met"
/inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
/note="Derived by automated computational analysis using
gene prediction method: tRNAscan-SE."
/anticodon=(pos:163121..163123,aa:Met,seq:cat)
gene 163197..163273
/locus_tag="DC465_RS08825"
tRNA 163197..163273
/locus_tag="DC465_RS08825"
/product="tRNA-Met"
/inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
/note="Derived by automated computational analysis using
gene prediction method: tRNAscan-SE."
/anticodon=(pos:163231..163233,aa:Met,seq:cat)
gene complement(163348..164601)
/gene="amiC"
/locus_tag="DC465_RS08830"
CDS complement(163348..164601)
/gene="amiC"
/locus_tag="DC465_RS08830"
/EC_number="3.5.1.28"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311701.2"
/note="Like AmiA, dependent on TAT (Twin-Arginine
Translocation) system for export; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/codon_start=1
/transl_table=11
/product="N-acetylmuramoyl-L-alanine amidase AmiC"
/protein_id="WP_000016907.1"
/translation="MSGSNTAISRRRLLQGAGAMWLLSVSQVSLAAVSQVVAVRVWPA
SSYTRVTVESNRQLKYKQFALSNPERVVVDIEDVNLNSVLKGMAAQIRADDPFIKSAR
VGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANAQDMQDPLLALLED
YNKGDLEKQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYKTREKDVVLQI
ARRLRSLIEKEGNMKVYMTRNEDIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPSG
SSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLK
FGKAVLNKLGKINKLHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQ
QEVAESILAGIKAYFADGATLARRG"
gene 164833..166164
/gene="argA"
/locus_tag="DC465_RS08835"
CDS 164833..166164
/gene="argA"
/locus_tag="DC465_RS08835"
/EC_number="2.3.1.1"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311702.1"
/GO_function="GO:0004042 - acetyl-CoA:L-glutamate
N-acetyltransferase activity [Evidence IEA]"
/GO_process="GO:0006526 - arginine biosynthetic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="amino-acid N-acetyltransferase"
/protein_id="WP_000237948.1"
/translation="MVKERKTELVEGFRHSVPYINTHRGKTFVIMLGGEAIEHENFSS
IVNDIGLLHSLGIRLVVVYGARPQIDANLAAHHHEPLYHKNIRVTDAKTLELVKQAAG
TLQLDITARLSMSLNNTPLQGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEDA
IHRQLDSGAIVLMGPVAVSVTGESFNLTSEEIATQLAIKLKAEKMIGFCSSQGVTNDD
GDIVSELFPNEAQARVEAQEEKGDYNSGTVRFLRGAVKACRSGVRRCHLISYQEDGAL
LQELFSRDGIGTQIVMESAEQIRRATINDIGGILELIRPLEQQGILVRRSREQLEMEI
DKFTIIQRDNTTIACAALYPFPEEKIGEMACVAVHPDYRSSSRGEVLLERITAQAKQS
GLSKLFVLTTRSIHWFQERGFTPVDIDLLPESKKQLYNYQRKSKVLMADLG"
gene complement(166226..168052)
/gene="recD"
/locus_tag="DC465_RS08840"
CDS complement(166226..168052)
/gene="recD"
/locus_tag="DC465_RS08840"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417296.1"
/GO_component="GO:0009338 - exodeoxyribonuclease V complex
[Evidence IEA]"
/GO_function="GO:0008854 - exodeoxyribonuclease V activity
[Evidence IEA]; GO:0004386 - helicase activity [Evidence
IEA]"
/GO_process="GO:0006310 - DNA recombination [Evidence
IEA]; GO:0006302 - double-strand break repair [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="exodeoxyribonuclease V subunit alpha"
/protein_id="WP_000775946.1"
/translation="MKLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSH
DAGEGHVCLPLSRLENNEASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMIL
CGDRLYLNRMWCNERTVARFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAV
ALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGK
ALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDL
PMMSRLIDALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAERAGQLSRLTG
THVPAGTGTEAASLRDSLCLLQKSYRFGSDSGIGQLAAAINRGDKTAVKTVFQQDFTD
IEKRLLQSGEDYIAMLEEALAGYGRYLDLLQARAEPDLIIQAFNEYQLLCALREGPFG
VAGLNERIEQFMQQKRKIHRHPHSRWYEGRPVMIARNDSALGLFNGDIGIALDRGQGT
RVWFAMPDGNIKSVQPSRLPEHETTWAMTVHKSQGSEFDHAALILPSQRTPVVTRELV
YTAVTRARRRLSLYADERILSAAIATRTERRSGLAALFSSRE"
gene complement(168052..171594)
/gene="recB"
/locus_tag="DC465_RS08845"
CDS complement(168052..171594)
/gene="recB"
/locus_tag="DC465_RS08845"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_708611.2"
/GO_function="GO:0005524 - ATP binding [Evidence IEA];
GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA
helicase activity [Evidence IEA]; GO:0008854 -
exodeoxyribonuclease V activity [Evidence IEA]"
/GO_process="GO:0006281 - DNA repair [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="exodeoxyribonuclease V subunit beta"
/protein_id="WP_001285985.1"
/translation="MSDVAETLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGL
GGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYERLLE
EIDDKAQAAQWLLLAERQMDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLR
YQACADFWRRHCYPLPREIALVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETL
ASRHAQIVARIDTVKQQWRDAVGELDALIESSGIDRRKFNRSNQAKWIEKISAWAEEE
TNSYQLPESLEKFSQRFLEDRTKAGGETPRHPLFEAIEQLLAEPLSIRDLVITRALAE
IRETVAREKRRRGELGFDDMLSRLDSALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQ
QYRIFRRIWHHQPETALLLIGDPKQAIYAFRGADIFTYMKARSEVHAHYTLDTNWRSA
PGMVNSVNKLFSQTDDAFMFREIPFIPVKSAGKNQALRFVFKGETQPAMKMWLMEGES
CGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDISVLVRSRQEAAQ
VRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLLQAVMTPERENTLRSALATSMMGLN
ALDIETLNNDEHAWDVVVEEFDGYRQIWRKRGVMPMLRALMSARNIAENLLATAGGER
RLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDSNASSQQMRLESDKHLVQIVT
IHKSKGLEYPLVWLPFITNFRVQDQAFYHDRHSFEAVLDLNAAPESVDLAEVERLAED
LRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGRLLQKGEPQDAAGLRTC
IEALCDDDIAWQTAQTGDNQPWQVNDALTAELNARTLQRLPGDNWRVTSYSGLQQRGH
GIAQDLMPRLDVDAAGVVSVVEEPTLTPHQFPRGASPGTFLHSLFEDLDFTQPVDPNW
VQEKLELGGFESQWEPVLTEWITAVLQAPLNETGVSLSQLSDRDKQVEMEFYLPISEP
LIASQLDALIRQFDPLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYYLLDYKSNWLGE
DSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYDRHFGGVIYLFLRGV
DKEHPQQGIYTTRPNAGLIALMDEMFAGMTLEEA"
gene complement(171587..174475)
/gene="ptrA"
/locus_tag="DC465_RS08850"
CDS complement(171587..174475)
/gene="ptrA"
/locus_tag="DC465_RS08850"
/EC_number="3.4.24.55"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311705.1"
/GO_function="GO:0046872 - metal ion binding [Evidence
IEA]; GO:0004222 - metalloendopeptidase activity [Evidence
IEA]"
/GO_process="GO:0006508 - proteolysis [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="pitrilysin"
/protein_id="WP_001138163.1"
/translation="MPRSTWFKALLLFVALWAPLSQAETGWQPIQETIRKSDKDNRQY
QAIRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYP
QADSLAEYLKMHGGSHNASTAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAE
RERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQAL
KDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEITVPVVTDAQKG
IIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVE
GISANSDPIVNGNSGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDEL
ANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMT
PQNARIWYISPKEPHNKTAYFVDAPYQVDKISEQTFADWQQKAANIALSLPELNPYIP
DDFSLIKSEKKYDHPELIVDESNLRVVYAPSRYFSSEPKADVSLILRNPKAMDSARNQ
VMFALNDYLAGLALDQLSNQASVGGISFSTNANNGLMVNANGYTQRLPQLFQALLEGY
FSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDERRKILPSI
TLKEVLAYRDALKSGARPEFMVIGNMTEAQATTLARDVQKQLGADGSEWCRNKDVVVD
KKQSVIFEKAGNSTDSALAAVFVPTGYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLG
YAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKLRAMKPDEFAQIQQ
AVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQKLADFFHQAVV
EPQGMAILSQISGSQNGKAEYVHPEGWKVWENVSALQQTMPLMSEKNE"
gene complement(174651..178019)
/gene="recC"
/locus_tag="DC465_RS08855"
CDS complement(174651..178019)
/gene="recC"
/locus_tag="DC465_RS08855"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417299.1"
/GO_component="GO:0009338 - exodeoxyribonuclease V complex
[Evidence IEA]"
/GO_function="GO:0008854 - exodeoxyribonuclease V activity
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="exodeoxyribonuclease V subunit gamma"
/protein_id="WP_000946943.1"
/translation="MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQ
WLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQL
LEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGE
AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA
LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL
FRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL
LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR
LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV
LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD
DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS
LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL
GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND
GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS
ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKSHLTCLHTRMPFDPQNYQPGE
RQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVN
FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE
IFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLL
SVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREG
MSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDI
WYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS"
gene complement(178032..178355)
/gene="ppdC"
/locus_tag="DC465_RS08860"
CDS complement(178032..178355)
/gene="ppdC"
/locus_tag="DC465_RS08860"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417300.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="prepilin-type N-terminal cleavage/methylation
domain-containing protein"
/protein_id="WP_001276478.1"
/translation="MSASLKNQQGFSLPEVMVAMVLMVMIVTALSGIQRTLMNSLASR
NQYQQLWRHGWQQTQLRAISPPANWQVNRMQTSQAGCVSISVTLVSPGGREGEMTRLH
CPNRQ"
gene complement(178340..178747)
/gene="ygdB"
/locus_tag="DC465_RS08865"
CDS complement(178340..178747)
/gene="ygdB"
/locus_tag="DC465_RS08865"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417301.4"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF2509 family protein"
/protein_id="WP_001078388.1"
/translation="MNREKGVSSLALVLMLLVLGSLLLQGMSQQDRSFASRVSMESQS
LRRQAIVQSALAWGKMHSWQTQPAVQCSQYAGTDAQVCLRLLADNEALLIAGYEGVSL
WRTGEVIDGNIVFSPRGWSDFCPLKERALCQLP"
gene complement(178744..179307)
/gene="ppdB"
/locus_tag="DC465_RS08870"
CDS complement(178744..179307)
/gene="ppdB"
/locus_tag="DC465_RS08870"
/inference="COORDINATES: similar to AA
sequence:RefSeq:YP_008439276.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="prepilin peptidase-dependent protein"
/protein_id="WP_001144322.1"
/translation="MPVKEQGFSLLEVLIAMAISSVLLLGAARFLPALQRESLTSTRK
LALEDEIWLRVFTVAKHLQRAGYCHGSCTGEGLEIVGQGDCIIVQWDANSNGIWDREP
VKESDQIGFRLKEHVLETLRGATSCEGKGWDKVTNPDAIIIDTFQVVRQDVSGFSPVL
TVNMRAASKSEPQTVVDASYSVTGFNL"
gene complement(179298..179768)
/gene="ppdA"
/locus_tag="DC465_RS08875"
CDS complement(179298..179768)
/gene="ppdA"
/locus_tag="DC465_RS08875"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417303.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="prepilin peptidase-dependent protein"
/protein_id="WP_000857051.1"
/translation="MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTAS
QARDYLLYLREDANWHNRDHSISVIREGTLWCLVSSAAGANTCHGSSPLVFVPRWPEV
EMSDLTPSLAFFGLRNTAWAGHIRFKNSTGEWWLVVSPWGRLRLCQQGETEGCL"
gene complement(179953..180747)
/gene="thyA"
/locus_tag="DC465_RS08885"
CDS complement(179953..180747)
/gene="thyA"
/locus_tag="DC465_RS08885"
/EC_number="2.1.1.45"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005123418.1"
/GO_function="GO:0004799 - thymidylate synthase activity
[Evidence IEA]"
/GO_process="GO:0006231 - dTMP biosynthetic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="thymidylate synthase"
/protein_id="WP_000816232.1"
/translation="MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPL
VTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWP
TPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLS
CQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHL
QLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYDPHPGIKAPVAI"
gene complement(180754..181629)
/gene="lgt"
/locus_tag="DC465_RS08890"
CDS complement(180754..181629)
/gene="lgt"
/locus_tag="DC465_RS08890"
/EC_number="2.5.1.145"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311712.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/GO_function="GO:0008961 -
phosphatidylglycerol-prolipoprotein diacylglyceryl
transferase activity [Evidence IEA]"
/GO_process="GO:0009249 - protein lipoylation [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="prolipoprotein diacylglyceryl transferase"
/protein_id="WP_000204658.1"
/translation="MTSSYLHFPEFDPVIFSIGPVALHWYGLMYLVGFIFAMWLATRR
ANRPGSGWTKNEVENLLYAGFLGVFLGGRIGYVLFYNFPQFMADPLYLFRVWDGGMSF
HGGLIGVIVVMIIFARRTKRSFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPNF
PFAMLFPGSRTEDILLLQTNPQWQSIFDTYGVLPRHPSQLYELLLEGVVLFIILNLYI
RKPRPMGAVSGLFLIGYGAFRIIVEFFRQPDAQFTGAWVQYISMGQILSIPMIVAGVI
MMVWAYRRSPQQHVS"
gene complement(181780..184026)
/gene="ptsP"
/locus_tag="DC465_RS08895"
CDS complement(181780..184026)
/gene="ptsP"
/locus_tag="DC465_RS08895"
/EC_number="2.7.3.9"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311713.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="phosphoenolpyruvate--protein phosphotransferase"
/protein_id="WP_000957900.1"
/translation="MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLAD
HDRRCYYLMATRGLKKPRGRTVTLAFDEGIVGLVGRLAEPINLADAQKHPSFKYIPSV
KEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQLT
ALFGQYRQTRIRALPAAPGVAIAEGWQDATLPLMEQVYQASTLDPALERERLTGALEE
AANEFRRYSKRFAAGAQKETAAIFDLYSHLLSDTRLRRDLFAEVDKGSVAEWAVKTVI
EKFAEQFAALSDNYLKERAGDLRALGQRLLFHLDDANQGPNAWPERFILVADELSATT
LAELPQDRLVGVVVRDGAANSHAAIMVRALGIPTVMGADIQPSVLHRRTLIVDGYRGE
LLVDPEPVLLQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEK
LGSRIDGIGLYRTEIPFMLQSGFPSEEEQVAQYQGMLQMFNDKPVTLRTLDVGADKQL
PYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLNILLPMVTSLDEVD
EARRLIERAGREVEEMIGYEIPKPRIGIMLEVPSMVFMLPHLAKRVDFISVGTNDLTQ
YILAVDRNNTRVANIYDSLHPAMLRALAMIAREAEIHGIDLRLCGEMAGDPMCVAILI
GLGYRHLSMNGRSVARVKYLLRRIDYADAENLAQRSLEAQLATEVRHQVAAFMERRGM
GGLIRGGL"
gene complement(184039..184569)
/gene="rppH"
/locus_tag="DC465_RS08900"
CDS complement(184039..184569)
/gene="rppH"
/locus_tag="DC465_RS08900"
/EC_number="3.6.1.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001655775.1"
/GO_function="GO:0016787 - hydrolase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="RNA pyrophosphohydrolase"
/protein_id="WP_000564489.1"
/translation="MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGE
SAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLL
QLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQE
NTPKPQNASAYRRKRG"
gene complement(184922..185068)
/gene="ygdT"
/locus_tag="DC465_RS30010"
CDS complement(184922..185068)
/gene="ygdT"
/locus_tag="DC465_RS30010"
/inference="COORDINATES: similar to AA
sequence:RefSeq:YP_009502650.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="protein YgdT"
/protein_id="WP_001701042.1"
/translation="MLSTESWDNCEKPPLLFPFTALTCDETPVFSGSVLNLVARSVDK
YGIG"
gene 185254..185943
/gene="mutH"
/locus_tag="DC465_RS08905"
CDS 185254..185943
/gene="mutH"
/locus_tag="DC465_RS08905"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311715.1"
/GO_function="GO:0004519 - endonuclease activity [Evidence
IEA]"
/GO_process="GO:0006304 - DNA modification [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DNA mismatch repair endonuclease MutH"
/protein_id="WP_000082188.1"
/translation="MSQPRPLLSPPETEEQLLAQAQQLSGYTLGELAALAGLVTPENL
KRDKGWIGVLLEIWLGASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPLTG
NSGVTWETSHVRHKLKRVLWIPVEGERSIPLAQRRVGSPLLWSPNEEEDRQLREDWEE
LMDMIVLGQVERITARHGEYLQIRPKAANAKALTEAIGARGERILTLPRGFYLKKNFT
SALLARHFLIQ"
gene 186012..186725
/gene="ygdQ"
/locus_tag="DC465_RS08910"
CDS 186012..186725
/gene="ygdQ"
/locus_tag="DC465_RS08910"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311716.1"
/GO_component="GO:0005886 - plasma membrane [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="TerC family protein"
/protein_id="WP_000895624.1"
/translation="MLFAWITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQ
RAHARRLGLAGAMVMRLALLASIAWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWK
ASKEIHESIEGEEEGLKTRVSSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAA
VVIAVGVMMFAARSIGDFVERHPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAM
FFSIAVESLNLIRNKKNPL"
gene 186863..187081
/gene="ygdR"
/locus_tag="DC465_RS08915"
CDS 186863..187081
/gene="ygdR"
/locus_tag="DC465_RS08915"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311717.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="lipoprotein YgdR"
/protein_id="WP_000758655.1"
/translation="MKKWAVIISAVGLAFAVSGCSSDYVMATKDGRMILTDGKPEIDD
DTGLVSYHDQQGNAMQINRDDVSQIIER"
gene 187189..188229
/gene="tas"
/locus_tag="DC465_RS08920"
CDS 187189..188229
/gene="tas"
/locus_tag="DC465_RS08920"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417311.1"
/GO_function="GO:0047834 - D-threo-aldose 1-dehydrogenase
activity [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="NADP(H)-dependent aldo-keto reductase"
/protein_id="WP_001199295.1"
/translation="MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGI
NLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPD
QALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDT
LDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVG
LAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAA
YVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELSEDVLAEI
EAVHQVYTYPAP"
gene complement(188261..189454)
/gene="lplT"
/locus_tag="DC465_RS08925"
CDS complement(188261..189454)
/gene="lplT"
/locus_tag="DC465_RS08925"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417312.1"
/GO_function="GO:0022857 - transmembrane transporter
activity [Evidence IEA]"
/GO_process="GO:0055085 - transmembrane transport
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="lysophospholipid transporter LplT"
/protein_id="WP_000004616.1"
/translation="MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQ
FYPEWSQPILQMVFVGAYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINP
FLGYTLVGVGAAAYSPAKYGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLAD
WHVLVALAACALAYGGAVVANIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGET
RFSLVGTSLFWGAGVTLRFLLVLWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKL
VTLETVSRCMPAGILIGVVVLIFSLQHELLPAYALLMLIGVMGGFFVVPLNALLQERG
KKSVGAGNAIAVQNLGENSAMLLMLGIYSLAVMIGIPVVPIGIGFGALFALAITALWI
WQRRH"
gene complement(189447..191606)
/gene="aas"
/locus_tag="DC465_RS08930"
CDS complement(189447..191606)
/gene="aas"
/locus_tag="DC465_RS08930"
/EC_number="2.3.1.40"
/EC_number="6.2.1.47"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417313.1"
/GO_function="GO:0008779 -
acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase
activity [Evidence IEA]; GO:0008922 - long-chain fatty
acid [acyl-carrier-protein] ligase activity [Evidence
IEA]"
/GO_process="GO:0006631 - fatty acid metabolic process
[Evidence IEA]; GO:0008654 - phospholipid biosynthetic
process [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="bifunctional acyl-ACP--phospholipid
O-acyltransferase/long-chain-fatty-acid--ACP ligase"
/protein_id="WP_000899054.1"
/translation="MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGIL
LGLFLPVRPVFAVYTSISQQWYMRWLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVI
FPEGRITTTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQI
TLHILPPTQVAMPDAPRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFG
AGKKCVEDVNFTPDSYRKLLTKTLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAI
ARRRMPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLE
DLKADVTTADKVWIFAHLLMPRLAQVKQQPEEEALILFTSGSEGHPKGVVHSHKSILA
NVEQIKTIADFTTNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPEL
VYDRSCTVLFGTSTFLGHYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRIL
EGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGIEEGGRLQLKGPNIMNG
YLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMV
SLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFTTDNELTRDKLQQYAREHGVPEL
AVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE"
gene 192192..193223
/gene="galR"
/locus_tag="DC465_RS08935"
CDS 192192..193223
/gene="galR"
/locus_tag="DC465_RS08935"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417314.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0006355 - regulation of DNA-templated
transcription [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="HTH-type transcriptional regulator GalR"
/protein_id="WP_000201048.1"
/translation="MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLS
YHPNANARALAQQTTETVGLIVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQ
KERQAIEQLIRHRCAALVVHAKMIPDADLASLMKQMPGMVLINRILPGFENRCIALDD
RYGAWLATRHLIQQGHTRIGYLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGE
PDESGGEQAMTELLGRGRNFTAVACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVL
VSRYVRPRLTTVRYPIVTMATQAAELALALADNRPLPEITNVFSPTLVRRHSVSTPSL
EASHHATSD"
gene complement(193230..194492)
/gene="lysA"
/locus_tag="DC465_RS08940"
CDS complement(193230..194492)
/gene="lysA"
/locus_tag="DC465_RS08940"
/EC_number="4.1.1.20"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417315.1"
/GO_function="GO:0008836 - diaminopimelate decarboxylase
activity [Evidence IEA]"
/GO_process="GO:0009089 - lysine biosynthetic process via
diaminopimelate [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="diaminopimelate decarboxylase"
/protein_id="WP_001120707.1"
/translation="MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALK
QFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTAD
VIDQATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGE
NSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQD
LQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQ
SGVLITQVRSVKQMGSRHFVLVDVGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVE
TVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLL
PEVLFDNGQARLIRRRQTIEELLALELL"
gene 194614..195549
/gene="lysR"
/locus_tag="DC465_RS08945"
CDS 194614..195549
/gene="lysR"
/locus_tag="DC465_RS08945"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311723.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DNA-binding transcriptional regulator LysR"
/protein_id="WP_000741827.1"
/translation="MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEK
VIGLKLFERVRGRLHPTVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLP
VFSQSFLPQLLQPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTER
TELLSLDEVCVLPPGHPLAVKKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKR
RMIVETHSAASVCAMVRAGVGVSVVNPLTALDYAASGLVVRRFSIAVPFTVSLIRPLH
RPSSALVQAFSEHLQAGLPKLVTSLDAILSSATTA"
gene complement(195536..196228)
/gene="ygeA"
/locus_tag="DC465_RS08950"
CDS complement(195536..196228)
/gene="ygeA"
/locus_tag="DC465_RS08950"
/EC_number="5.1.1.10"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311724.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="amino acid racemase"
/protein_id="WP_000848664.1"
/translation="MKTIGLLGGMSWESTIPYYRLINEGIKQRLGGLHSAQVLLHSVD
FHEIEECQRRGEWDKTGDILAEAALGLQRAGAEGIVLCTNTMHKVADAIESRCTLPFL
HIADATGRAITGAGMTRVALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQI
IFEELCLGQFTEASRAYYAQVIARLAEQGAQGVIFGCTEIGLLVPEERSVLPVFDTAA
IHAEDAVAFMLS"
gene complement(196357..197775)
/gene="araE"
/locus_tag="DC465_RS08955"
CDS complement(196357..197775)
/gene="araE"
/locus_tag="DC465_RS08955"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311725.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="arabinose-proton symporter AraE"
/protein_id="WP_000256438.1"
/translation="MVTINTESALTPRSLRDTRRMNMFVSVAAAVAGLLFGLDIGVIA
GALPFITDHFVLTSRLQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMAGAILFVLG
SIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLG
IVLAFLSDTAFSYSGNWRAMLGVLALPAVLLIILVVFLPNSPRWLAEKGRHIEAEEVL
RMLRDTSEKAREELNEIRESLKLKQGGWALFKINRNVRRAVFLGMLLQAMQQFTGMNI
IMYYAPRIFKMAGFTTTEQQMIATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVM
ALGTLVLGYCLMQFDNGTASSGLSWLSVGMTMMCIAGYAMSAAPVVWILCSEIQPLKC
RDFGITCSTTTNWVSNMIIGATFLTLLDSIGAAGTFWLYTALNIAFVGITFWLIPETK
NVTLEHIERKLMAGEKLRNIGV"
gene complement(198090..198851)
/gene="kduD"
/locus_tag="DC465_RS08960"
CDS complement(198090..198851)
/gene="kduD"
/locus_tag="DC465_RS08960"
/EC_number="1.1.1.127"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311726.1"
/GO_function="GO:0008678 - 2-deoxy-D-gluconate
3-dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD
binding [Evidence IEA]; GO:0016491 - oxidoreductase
activity [Evidence IEA]"
/GO_process="GO:0000272 - polysaccharide catabolic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase
KduD"
/protein_id="WP_000603518.1"
/translation="MILSAFSLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVE
PTETIKQVTALGRRFLSLTADLRKIDGIPALLDRAVAEFGHIDILVNNAGLIRREDAL
EFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTA
SKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRW
GLPSDLMGPVVFLASSASDYVNGYTIAVDGGWLAR"
gene complement(198881..199717)
/gene="kduI"
/locus_tag="DC465_RS08965"
CDS complement(198881..199717)
/gene="kduI"
/locus_tag="DC465_RS08965"
/EC_number="5.3.1.17"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417320.1"
/GO_function="GO:0008697 -
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase
activity [Evidence IEA]"
/GO_process="GO:0045490 - pectin catabolic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="5-dehydro-4-deoxy-D-glucuronate isomerase"
/protein_id="WP_000383224.1"
/translation="MDVRQSIHSAHAKTLDTQGLRNEFLVEEVFVADEYTMVYSHIDR
IIVGGIMPITKTVSVGGEVGKQLGVSYFLERRELGVINIGGAGTITVDGQCYEIGHRD
ALYVGKGAKEVVFASIDTATPAKFYYNCAPAHTTYPTKKVTPDEVSPVTLGDNLTSNR
RTINKYFVPDVLETCQLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFH
MMGQPQETRHIVMHNEQAVISPSWSIHSGVGTKAYTFIWGMVGENQVFDDMDHVAVKD
LR"
gene complement(200004..201185)
/gene="yqeF"
/locus_tag="DC465_RS08970"
CDS complement(200004..201185)
/gene="yqeF"
/locus_tag="DC465_RS08970"
/EC_number="2.3.1.9"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417321.2"
/GO_function="GO:0016747 - acyltransferase activity,
transferring groups other than amino-acyl groups [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="acetyl-CoA C-acetyltransferase"
/protein_id="WP_000656029.1"
/translation="MKDVVIVGALRTPIGCFRGALAGHSAVELGSLVVKALIERTGVP
AYAVDEVILGQVLTAGAGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQAI
QCGEADIVIAGGQENMSRAPHVLTDSRTGAQLGNSQLVDSLVHDGLWDAFNDYHIGVT
AENLAREYGISRQLQDAYALSSQQKARAAIDAGRFKDEIVPVMTQSNGQTLVVDTDEQ
PRTDASAEGLARLNPSFDSLGSVTAGNASSINDGAAAVMMMSEAKARALNLPVLARIR
AFASVGVDPALMGIAPVYATRRCLERVGWQLADVDLIEANEAFAAQALSVGKMLEWDE
RRVNVNGGAIALGHPIGASGCRILVSLVHEMVKRNARKGLATLCIGGGQGVALTIERD
E"
gene 201440..202669
/gene="yqeG"
/locus_tag="DC465_RS08975"
CDS 201440..202669
/gene="yqeG"
/locus_tag="DC465_RS08975"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311729.1"
/GO_process="GO:0006865 - amino acid transport [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="amino acid permease"
/protein_id="WP_000065950.1"
/translation="MSNIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAVVLFITA
LVAWPLTYWPHKALCQFILSSKTSAGEGITGAVTHYYGKKIGNLITTLYFIAFFVVVL
IYAVAITNSLTEQLAKHMVIDLRIRMLVSLGVVLILNLIFLMGRHATIRVMGFLVFPL
IAYFLFLSIYLVGSWQPDLLTTQVEFNQNTLHQIWISIPVMVFAFSHTPIISTFAIDR
REKYGEHAMDKCKKIMKVAYLIICISVLFFVFSCLLSIPPSYIEAAKEEGVTILSALS
MLPNAPAWLSISGIIVAVVAMSKSFLGTYFGVIEGATEVVKTTLQQVGVKKSRAFNRA
LSIMLVSLITFIVCCINPNAISMIYAISGPLIAMILFIMPTLSTYLIPALKPWRSIGN
LITLIVGILCVSVMFFS"
gene 203129..203761
/gene="yqeH"
/locus_tag="DC465_RS08980"
CDS 203129..203761
/gene="yqeH"
/locus_tag="DC465_RS08980"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417323.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="helix-turn-helix transcriptional regulator"
/protein_id="WP_001387025.1"
/translation="MGLCSRYKSLTCNSCSMHCQIMPEESPRLQYCANSCFCMWPEES
SYFNRGVVEGILTKNHNARLSGYIFVDFSVSFLRLFLEKDWIDYLASTDMGIVLVSDR
NMQSLANYWRKHNSAISAVIYNDDGLDVANEKIRQLFIGRYLSFTRGNTLTQMEFTIM
GYMVSGYNPYQIAEVLDMDIRSIYAYKQRIEKRMGDKINELFIRSHSVQH"
gene 204095..204904
/gene="yqeI"
/locus_tag="DC465_RS08985"
CDS 204095..204904
/gene="yqeI"
/locus_tag="DC465_RS08985"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417324.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="WP_001345937.1"
/translation="MYWIINDNIEFWPEHRKLISVHNADLNVVLTTPASRCLSLLLEA
FPDVVAQQDFFTRVWEEEGMRVPTNTLYQNISIIRRGFRAVGDTTHSLIATVPRRGFK
IHNDINIQNHVINSSTDAHTHNAPPAIKVNAGYKESIGGAKNFNNKILKHIKSHLIML
SAFVIGAYSAYWLWNNNQPKPFFKDYKTVAEINGCHFNVTDDTIDGLKEFDKYKTRIL
DSGINCKKHPWLYFPLAKSSPGMIVMACNKNYNQHEVADCLTLSYREVNRD"
gene 204897..205379
/gene="yqeJ"
/locus_tag="DC465_RS08990"
CDS 204897..205379
/gene="yqeJ"
/locus_tag="DC465_RS08990"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417325.4"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="protein YqeJ"
/protein_id="WP_000568339.1"
/translation="MIDYKKNLLFILVFISGFILFTVYSYTAEKMIYNETCTANWVIF
NDQGRANLTIDFMYNKKNKTGTVALSGTWQQGNRESKSIRRNIEYTWIENYDTAHLTS
KKVNKFEIMDQVDDDRLAQLIPDFYVFPEKSVSYNILKQGKHAFILSIGNRAIMHCAR
"
gene complement(205412..205492)
/locus_tag="DC465_RS08995"
CDS complement(205412..205492)
/locus_tag="DC465_RS08995"
/inference="COORDINATES: similar to AA
sequence:RefSeq:YP_002791253.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_000655821.1"
/translation="MKDVDQNFDALDCHILREYLILLFYD"
gene complement(205528..205953)
/gene="yqeK"
/locus_tag="DC465_RS09000"
CDS complement(205528..205953)
/gene="yqeK"
/locus_tag="DC465_RS09000"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417326.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="protein YqeK"
/protein_id="WP_001356275.1"
/translation="MDIEFSQIHEMVYMHDIVNSDSKKKPRIPLKKFLNAENVLTQTT
SWTLKSRYVNVNSVNKVNVKSKVKNSYISRSVNDEFSLTDDEINSFKETLVLSSIDSL
SKLVLNNPLSVLFTSTVRRNNNRAKMNVEFDSWICTRCC"
gene 206147..206637
/locus_tag="DC465_RS09005"
/pseudo
CDS 206147..206637
/locus_tag="DC465_RS09005"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_311734.1"
/note="frameshifted; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="hypothetical protein"
gene 206862..207353
/gene="ygeG"
/locus_tag="DC465_RS09010"
CDS 206862..207353
/gene="ygeG"
/locus_tag="DC465_RS09010"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417328.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="tetratricopeptide repeat protein"
/protein_id="WP_000102786.1"
/translation="MSTETIEIFNNSDEWANQLKHALSKGENLALLHGLTPDILDRIY
AYAFDYHEKGNITDAEIYYKFLCIYAFENHEYLKDFASVCQPKKKYQQAYDLYKLSYN
YSPYDDYSVIYRMGQCQIGAKNIDNAMQCFYHIINNCEDDSVKSKAQAYIELLNDNSE
DNG"
gene 207688..>208497
/locus_tag="DC465_RS09015"
/pseudo
CDS 207688..>208497
/locus_tag="DC465_RS09015"
/inference="COORDINATES: similar to AA
sequence:RefSeq:NP_417329.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0000160 - phosphorelay signal transduction
system [Evidence IEA]; GO:0006355 - regulation of
DNA-templated transcription [Evidence IEA]"
/note="incomplete; partial in the middle of a contig;
missing C-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="winged helix-turn-helix domain-containing
protein"
CONTIG join(QETU01000006.1:1..208615)
//