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uncharacterized protein AT1G27300 [Arabidopsis thaliana]

NCBI Reference Sequence: NP_564275.1

Identical Proteins FASTA Graphics 

LOCUS       NP_564275                200 aa            linear   PLN 20-OCT-2022
DEFINITION  uncharacterized protein AT1G27300 [Arabidopsis thaliana].
ACCESSION   NP_564275
VERSION     NP_564275.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
DBSOURCE    REFSEQ: accession NM_102492.3
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 200)
  AUTHORS   Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
            White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
            Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
            Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
            Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
            Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
            Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
            Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
            Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
            Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
            Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
            Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
            Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
            Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
            Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
            Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
            Fraser,C.M., Venter,J.C. and Davis,R.W.
  TITLE     Sequence and analysis of chromosome 1 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 816-820 (2000)
   PUBMED   11130712
REFERENCE   2  (residues 1 to 200)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 200)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (residues 1 to 200)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   5  (residues 1 to 200)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            The reference sequence is identical to AEE30804.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="1"
                     /ecotype="Columbia"
     Protein         1..200
                     /product="uncharacterized protein"
                     /calculated_mol_wt=22289
     CDS             1..200
                     /locus_tag="AT1G27300"
                     /gene_synonym="F17L21.9; F17L21_9"
                     /coded_by="NM_102492.3:168..770"
                     /inference="Similar to RNA sequence,
                     EST:INSD:ES127568.1,INSD:EG500347.1,INSD:BP800174.1,
                     INSD:BP653273.1,INSD:EL159513.1,INSD:DR382491.1,
                     INSD:BP641459.1,INSD:ES194920.1,INSD:EH929534.1,
                     INSD:EG500345.1,INSD:EH798902.1,INSD:EH993383.1,
                     INSD:BP842401.1,INSD:BP817528.1,INSD:EL289456.1,
                     INSD:BP584928.1,INSD:EL026177.1,INSD:CD529051.1,
                     INSD:EG515235.1,INSD:BP646518.1,INSD:ES064451.1,
                     INSD:ES179006.1,INSD:EH916095.1,INSD:ES079290.1,
                     INSD:EG494931.1,INSD:ES062316.1,INSD:EL193846.1,
                     INSD:EH860581.1,INSD:BP566953.1,INSD:EL060292.1,
                     INSD:AV549408.1,INSD:EH927587.1,INSD:BP574033.1,
                     INSD:EH822602.1,INSD:ES201274.1,INSD:DR368920.1,
                     INSD:EL101113.1,INSD:EL973663.1,INSD:AV559008.1,
                     INSD:BP857578.1,INSD:EL148611.1,INSD:BP634003.1,
                     INSD:AV783641.1,INSD:EL191936.1,INSD:BP671202.1,
                     INSD:AV802948.1,INSD:AV832172.1,INSD:BP799513.1,
                     INSD:BP859655.1,INSD:EL197977.1,INSD:ES017667.1,
                     INSD:BP573941.1,INSD:DR374159.1,INSD:BP570398.1,
                     INSD:BP661005.1,INSD:EG494927.1,INSD:EL035321.1,
                     INSD:BP799550.1,INSD:BP857952.1,INSD:AV819453.1,
                     INSD:BP636746.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:AY064655.1,INSD:AY054537.1"
                     /note="unknown protein; Has 54 Blast hits to 54 proteins
                     in 19 species: Archae - 0; Bacteria - 0; Metazoa - 11;
                     Fungi - 6; Plants - 34; Viruses - 0; Other Eukaryotes - 3
                     (source: NCBI BLink)."
                     /db_xref="Araport:AT1G27300"
                     /db_xref="GeneID:839619"
                     /db_xref="TAIR:AT1G27300"
ORIGIN      
        1 messedvenl sraiekllhe krkreasgda fiedaddqlf lsslisqles pnpkgkedvi
       61 tgeeeekeee sadsspskgk segqrqlees ieeiakdikk vkkqnkithv llsatiiltl
      121 vwqlseysmi fmlkdrishp vrsiggmlng mfkgklrpik nqlagtsnsn dqnnhgngsh
      181 tgpqlqvpel lrefgfddee
//
Feature
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Protein clusters for NP_564275.1

Reference sequence information

  • RefSeq mRNA
    See reference mRNA sequence for the AT1G27300 gene (NM_102492.3).

More about the AT1G27300 gene

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