LOCUS NP_190852 727 aa linear PLN 20-OCT-2022
DEFINITION beta-galactosidase 2 [Arabidopsis thaliana].
ACCESSION NP_190852
VERSION NP_190852.2
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
DBSOURCE REFSEQ: accession NM_115144.4
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 727)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (residues 1 to 727)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 727)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (residues 1 to 727)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
The reference sequence is identical to AEE78999.
On Apr 24, 2008 this sequence version replaced NP_190852.1.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..727
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
Protein 1..727
/product="beta-galactosidase 2"
/calculated_mol_wt=81884
Region 11..725
/region_name="PLN03059"
/note="beta-galactosidase; Provisional"
/db_xref="CDD:166698"
CDS 1..727
/gene="BGAL2"
/locus_tag="AT3G52840"
/gene_synonym="beta-galactosidase 2"
/coded_by="NM_115144.4:158..2341"
/inference="Similar to RNA sequence,
EST:INSD:AV556956.1,INSD:EL140006.1,INSD:EH924458.1,
INSD:EH877875.1,INSD:EH950975.1,INSD:EL295339.1,
INSD:EH801325.1,INSD:BP867776.1,INSD:EL073576.1,
INSD:EL018589.1,INSD:AV522328.1,INSD:F14142.1,
INSD:EH847962.1,INSD:EH890174.1,INSD:EH955272.1,
INSD:EL042280.1,INSD:BP839440.1,INSD:BP655966.1,
INSD:ES175097.1,INSD:EL220404.1,INSD:T41862.1,
INSD:EL187181.1,INSD:AV827248.1,INSD:EH836098.1,
INSD:BE530658.1,INSD:AV797644.1,INSD:AV790480.1,
INSD:EL248722.1,INSD:F14066.1,INSD:EG465580.1,
INSD:EH980713.1,INSD:EL127042.1,INSD:EL146975.1,
INSD:EG465579.1,INSD:EL173083.1,INSD:EL312901.1,
INSD:AV811896.1,INSD:EH838558.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF083670.1,INSD:AF367327.1,INSD:AJ270298.1,
INSD:BT000511.1"
/note="beta-galactosidase 2 (BGAL2); FUNCTIONS IN: cation
binding, beta-galactosidase activity, hydrolase activity,
hydrolyzing O-glycosyl compounds, catalytic activity;
INVOLVED IN: lactose catabolic process, using glucoside
3-dehydrogenase, carbohydrate metabolic process, lactose
catabolic process via UDP-galactose, lactose catabolic
process; LOCATED IN: apoplast; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 12 growth stages; CONTAINS
InterPro DOMAIN/s: Glycoside hydrolase, family 35,
conserved site (InterPro:IPR019801), Glycoside hydrolase,
family 35 (InterPro:IPR001944), Glycoside hydrolase,
catalytic core (InterPro:IPR017853), Galactose-binding
domain-like (InterPro:IPR008979), Glycoside hydrolase,
subgroup, catalytic core (InterPro:IPR013781); BEST
Arabidopsis thaliana protein match is: beta-galactosidase
12 (TAIR:AT4G26140.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="GeneID:824450"
/db_xref="TAIR:AT3G52840"
/db_xref="Araport:AT3G52840"
ORIGIN
1 msmhfrnkaw iilailcfss lihsteavvt ydhkaliing qrrilisgsi hyprstpemw
61 pdlikkakeg gldviqtyvf wnghepspgn yyfqdrydlv kftklvhqag lyldlrigpy
121 vcaewnfggf pvwlkyvpgm vfrtdnepfk iamqkftkki vdmmkeeklf etqggpiils
181 qieneygpmq wemgaagkay skwtaemalg lstgvpwimc kqedapypii dtcngfyceg
241 fkpnsdnkpk lwtenwtgwf tefggaipnr pvediafsva rfiqnggsfm nyymyyggtn
301 fdrtagvfia tsydydapid eygllrepky shlkelhkvi klcepalvsv dptitslgdk
361 qeihvfkskt scaaflsnyd tssaarvmfr gfpydlppws vsilpdckte yyntakirap
421 tilmkmipts tkfswesyne gspssneagt fvkdglveqi smtrdktdyf wyftditigs
481 desflktgdn plltifsagh alhvfvngll agtsygalsn skltfsqnik lsvginklal
541 lstavglpna gvhyetwntg ilgpvtlkgv nsgtwdmskw kwsykiglrg eamslhtlag
601 ssavkwwikg fvvkkqpltw ykssfdtprg neplaldmnt mgkgqvwvng hnigrhwpay
661 targncgrcn yagiynekkc lshcgepsqr wyhvprswlk pfgnllvife ewggdpsgis
721 lvkrtak
//