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beta-galactosidase 2 [Arabidopsis thaliana]

NCBI Reference Sequence: NP_190852.2

Identical Proteins FASTA Graphics 

LOCUS       NP_190852                727 aa            linear   PLN 20-OCT-2022
DEFINITION  beta-galactosidase 2 [Arabidopsis thaliana].
ACCESSION   NP_190852
VERSION     NP_190852.2
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
DBSOURCE    REFSEQ: accession NM_115144.4
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 727)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (residues 1 to 727)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 727)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (residues 1 to 727)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            The reference sequence is identical to AEE78999.
            
            On Apr 24, 2008 this sequence version replaced NP_190852.1.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     Protein         1..727
                     /product="beta-galactosidase 2"
                     /calculated_mol_wt=81884
     Region          11..725
                     /region_name="PLN03059"
                     /note="beta-galactosidase; Provisional"
                     /db_xref="CDD:166698"
     CDS             1..727
                     /gene="BGAL2"
                     /locus_tag="AT3G52840"
                     /gene_synonym="beta-galactosidase 2"
                     /coded_by="NM_115144.4:158..2341"
                     /inference="Similar to RNA sequence,
                     EST:INSD:AV556956.1,INSD:EL140006.1,INSD:EH924458.1,
                     INSD:EH877875.1,INSD:EH950975.1,INSD:EL295339.1,
                     INSD:EH801325.1,INSD:BP867776.1,INSD:EL073576.1,
                     INSD:EL018589.1,INSD:AV522328.1,INSD:F14142.1,
                     INSD:EH847962.1,INSD:EH890174.1,INSD:EH955272.1,
                     INSD:EL042280.1,INSD:BP839440.1,INSD:BP655966.1,
                     INSD:ES175097.1,INSD:EL220404.1,INSD:T41862.1,
                     INSD:EL187181.1,INSD:AV827248.1,INSD:EH836098.1,
                     INSD:BE530658.1,INSD:AV797644.1,INSD:AV790480.1,
                     INSD:EL248722.1,INSD:F14066.1,INSD:EG465580.1,
                     INSD:EH980713.1,INSD:EL127042.1,INSD:EL146975.1,
                     INSD:EG465579.1,INSD:EL173083.1,INSD:EL312901.1,
                     INSD:AV811896.1,INSD:EH838558.1"
                     /inference="Similar to RNA sequence,
                     mRNA:INSD:AF083670.1,INSD:AF367327.1,INSD:AJ270298.1,
                     INSD:BT000511.1"
                     /note="beta-galactosidase 2 (BGAL2); FUNCTIONS IN: cation
                     binding, beta-galactosidase activity, hydrolase activity,
                     hydrolyzing O-glycosyl compounds, catalytic activity;
                     INVOLVED IN: lactose catabolic process, using glucoside
                     3-dehydrogenase, carbohydrate metabolic process, lactose
                     catabolic process via UDP-galactose, lactose catabolic
                     process; LOCATED IN: apoplast; EXPRESSED IN: 26 plant
                     structures; EXPRESSED DURING: 12 growth stages; CONTAINS
                     InterPro DOMAIN/s: Glycoside hydrolase, family 35,
                     conserved site (InterPro:IPR019801), Glycoside hydrolase,
                     family 35 (InterPro:IPR001944), Glycoside hydrolase,
                     catalytic core (InterPro:IPR017853), Galactose-binding
                     domain-like (InterPro:IPR008979), Glycoside hydrolase,
                     subgroup, catalytic core (InterPro:IPR013781); BEST
                     Arabidopsis thaliana protein match is: beta-galactosidase
                     12 (TAIR:AT4G26140.1); Has 30201 Blast hits to 17322
                     proteins in 780 species: Archae - 12; Bacteria - 1396;
                     Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
                     Other Eukaryotes - 2996 (source: NCBI BLink)."
                     /db_xref="GeneID:824450"
                     /db_xref="TAIR:AT3G52840"
                     /db_xref="Araport:AT3G52840"
ORIGIN      
        1 msmhfrnkaw iilailcfss lihsteavvt ydhkaliing qrrilisgsi hyprstpemw
       61 pdlikkakeg gldviqtyvf wnghepspgn yyfqdrydlv kftklvhqag lyldlrigpy
      121 vcaewnfggf pvwlkyvpgm vfrtdnepfk iamqkftkki vdmmkeeklf etqggpiils
      181 qieneygpmq wemgaagkay skwtaemalg lstgvpwimc kqedapypii dtcngfyceg
      241 fkpnsdnkpk lwtenwtgwf tefggaipnr pvediafsva rfiqnggsfm nyymyyggtn
      301 fdrtagvfia tsydydapid eygllrepky shlkelhkvi klcepalvsv dptitslgdk
      361 qeihvfkskt scaaflsnyd tssaarvmfr gfpydlppws vsilpdckte yyntakirap
      421 tilmkmipts tkfswesyne gspssneagt fvkdglveqi smtrdktdyf wyftditigs
      481 desflktgdn plltifsagh alhvfvngll agtsygalsn skltfsqnik lsvginklal
      541 lstavglpna gvhyetwntg ilgpvtlkgv nsgtwdmskw kwsykiglrg eamslhtlag
      601 ssavkwwikg fvvkkqpltw ykssfdtprg neplaldmnt mgkgqvwvng hnigrhwpay
      661 targncgrcn yagiynekkc lshcgepsqr wyhvprswlk pfgnllvife ewggdpsgis
      721 lvkrtak
//
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Protein clusters for NP_190852.2

Reference sequence information

More about the BGAL2 gene

  • BGAL2 gene
    Also Known As: AT3G52840, beta-galacto...

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