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GDSL-motif lipase 5 [Arabidopsis thaliana]

NCBI Reference Sequence: NP_175795.2

Identical Proteins FASTA Graphics 

LOCUS       NP_175795                385 aa            linear   PLN 20-OCT-2022
DEFINITION  GDSL-motif lipase 5 [Arabidopsis thaliana].
ACCESSION   NP_175795
VERSION     NP_175795.2
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
DBSOURCE    REFSEQ: accession NM_104270.3
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 385)
  AUTHORS   Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
            White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
            Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
            Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
            Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
            Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
            Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
            Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
            Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
            Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
            Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
            Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
            Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
            Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
            Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
            Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
            Fraser,C.M., Venter,J.C. and Davis,R.W.
  TITLE     Sequence and analysis of chromosome 1 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 816-820 (2000)
   PUBMED   11130712
REFERENCE   2  (residues 1 to 385)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 385)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (residues 1 to 385)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   5  (residues 1 to 385)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            The reference sequence is identical to AEE33025.
            
            On May 13, 2003 this sequence version replaced NP_175795.1.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="1"
                     /ecotype="Columbia"
     Protein         1..385
                     /product="GDSL-motif lipase 5"
                     /calculated_mol_wt=43327
     Region          47..364
                     /region_name="SGNH_plant_lipase_like"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; cd01837"
                     /db_xref="CDD:238875"
     Site            order(55,131,185,345,348)
                     /site_type="active"
                     /db_xref="CDD:238875"
     Site            order(55,345,348)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     Site            order(55,131,185)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
     CDS             1..385
                     /gene="GLIP5"
                     /locus_tag="AT1G53920"
                     /gene_synonym="GDSL-motif lipase 5; T18A20.15; T18A20_15"
                     /coded_by="NM_104270.3:189..1346"
                     /inference="Similar to RNA sequence,
                     EST:INSD:T46083.1,INSD:EL206281.1,INSD:EG467014.1,
                     INSD:EL172280.1,INSD:EL063624.1,INSD:EL058367.1,
                     INSD:EL104012.1,INSD:EL033990.1,INSD:EL043366.1,
                     INSD:EL302451.1,INSD:EG467013.1,INSD:EH810888.1,
                     INSD:DR356612.1,INSD:EH904898.1,INSD:EL288948.1,
                     INSD:EH865857.1,INSD:EH951051.1,INSD:EG467012.1,
                     INSD:DR220550.1,INSD:EH829840.1,INSD:DR220551.1"
                     /note="GDSL-motif lipase 5 (GLIP5); FUNCTIONS IN: lipase
                     activity, carboxylesterase activity; INVOLVED IN: lipid
                     metabolic process; EXPRESSED IN: 18 plant structures;
                     EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
                     DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST
                     Arabidopsis thaliana protein match is: GDSL lipase 1
                     (TAIR:AT5G40990.1); Has 3342 Blast hits to 3298 proteins
                     in 168 species: Archae - 0; Bacteria - 231; Metazoa - 0;
                     Fungi - 23; Plants - 3083; Viruses - 0; Other Eukaryotes -
                     5 (source: NCBI BLink)."
                     /db_xref="Araport:AT1G53920"
                     /db_xref="GeneID:841830"
                     /db_xref="TAIR:AT1G53920"
ORIGIN      
        1 mrestlmekv trrtissfif fivsstilfl agkssakish ngdnnvtalf lfgdsfldag
       61 nnnyintttl dqanfppygq tffglptgrf sdgrlisdfi aeyanlplip pflepgnsqk
      121 klygvnfasa gagalvetfq gsvinlrtql dhykkverlw rtnfgkeesk krisravyli
      181 sigsndyssi fltnqslpis msqhvdivig nlttfiheiy kiggrkfgfl nvpdlgcfpa
      241 lrilqpkndd sclrdasrla smhnraltnl lfqmqrqvkg fkfslfdmnk slrlrmqhps
      301 kfgfkegeea ccgtgkwrgv fscggkrivk eyqlcenpkd yifwdslhlt qntynqfanl
      361 iwngghmsds lvvgpyninn lfqip
//
1..385
/gene="GLIP5"
/locus_tag="AT1G53920"
/gene_synonym="GDSL-motif lipase 5; T18A20.15; T18A20_15"
/coded_by="NM_104270.3:189..1346"
/inference="Similar to RNA sequence,
EST:INSD:T46083.1,INSD:EL206281.1,INSD:EG467014.1,
INSD:EL172280.1,INSD:EL063624.1,INSD:EL058367.1,
INSD:EL104012.1,INSD:EL033990.1,INSD:EL043366.1,
INSD:EL302451.1,INSD:EG467013.1,INSD:EH810888.1,
INSD:DR356612.1,INSD:EH904898.1,INSD:EL288948.1,
INSD:EH865857.1,INSD:EH951051.1,INSD:EG467012.1,
INSD:DR220550.1,INSD:EH829840.1,INSD:DR220551.1"
/note="GDSL-motif lipase 5 (GLIP5); FUNCTIONS IN: lipase
activity, carboxylesterase activity; INVOLVED IN: lipid
metabolic process; EXPRESSED IN: 18 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST
Arabidopsis thaliana protein match is: GDSL lipase 1
(TAIR:AT5G40990.1); Has 3342 Blast hits to 3298 proteins
in 168 species: Archae - 0; Bacteria - 231; Metazoa - 0;
Fungi - 23; Plants - 3083; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink)."
/db_xref="Araport:AT1G53920"
/db_xref="GeneID:841830"
/db_xref="TAIR:AT1G53920"
Feature NP_175795 : 1 segment
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Protein clusters for NP_175795.2

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