LOCUS NP_175795 385 aa linear PLN 20-OCT-2022
DEFINITION GDSL-motif lipase 5 [Arabidopsis thaliana].
ACCESSION NP_175795
VERSION NP_175795.2
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
DBSOURCE REFSEQ: accession NM_104270.3
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 385)
AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
Fraser,C.M., Venter,J.C. and Davis,R.W.
TITLE Sequence and analysis of chromosome 1 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 816-820 (2000)
PUBMED 11130712
REFERENCE 2 (residues 1 to 385)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 385)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (residues 1 to 385)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 5 (residues 1 to 385)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
The reference sequence is identical to AEE33025.
On May 13, 2003 this sequence version replaced NP_175795.1.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..385
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="1"
/ecotype="Columbia"
Protein 1..385
/product="GDSL-motif lipase 5"
/calculated_mol_wt=43327
Region 47..364
/region_name="SGNH_plant_lipase_like"
/note="a plant specific subfamily of the SGNH-family of
hydrolases, a diverse family of lipases and esterases. The
tertiary fold of the enzyme is substantially different
from that of the alpha/beta hydrolase family and unique
among all known hydrolases; its...; cd01837"
/db_xref="CDD:238875"
Site order(55,131,185,345,348)
/site_type="active"
/db_xref="CDD:238875"
Site order(55,345,348)
/site_type="active"
/note="catalytic triad [active]"
/db_xref="CDD:238875"
Site order(55,131,185)
/site_type="active"
/note="oxyanion hole [active]"
/db_xref="CDD:238875"
CDS 1..385
/gene="GLIP5"
/locus_tag="AT1G53920"
/gene_synonym="GDSL-motif lipase 5; T18A20.15; T18A20_15"
/coded_by="NM_104270.3:189..1346"
/inference="Similar to RNA sequence,
EST:INSD:T46083.1,INSD:EL206281.1,INSD:EG467014.1,
INSD:EL172280.1,INSD:EL063624.1,INSD:EL058367.1,
INSD:EL104012.1,INSD:EL033990.1,INSD:EL043366.1,
INSD:EL302451.1,INSD:EG467013.1,INSD:EH810888.1,
INSD:DR356612.1,INSD:EH904898.1,INSD:EL288948.1,
INSD:EH865857.1,INSD:EH951051.1,INSD:EG467012.1,
INSD:DR220550.1,INSD:EH829840.1,INSD:DR220551.1"
/note="GDSL-motif lipase 5 (GLIP5); FUNCTIONS IN: lipase
activity, carboxylesterase activity; INVOLVED IN: lipid
metabolic process; EXPRESSED IN: 18 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST
Arabidopsis thaliana protein match is: GDSL lipase 1
(TAIR:AT5G40990.1); Has 3342 Blast hits to 3298 proteins
in 168 species: Archae - 0; Bacteria - 231; Metazoa - 0;
Fungi - 23; Plants - 3083; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink)."
/db_xref="Araport:AT1G53920"
/db_xref="GeneID:841830"
/db_xref="TAIR:AT1G53920"
ORIGIN
1 mrestlmekv trrtissfif fivsstilfl agkssakish ngdnnvtalf lfgdsfldag
61 nnnyintttl dqanfppygq tffglptgrf sdgrlisdfi aeyanlplip pflepgnsqk
121 klygvnfasa gagalvetfq gsvinlrtql dhykkverlw rtnfgkeesk krisravyli
181 sigsndyssi fltnqslpis msqhvdivig nlttfiheiy kiggrkfgfl nvpdlgcfpa
241 lrilqpkndd sclrdasrla smhnraltnl lfqmqrqvkg fkfslfdmnk slrlrmqhps
301 kfgfkegeea ccgtgkwrgv fscggkrivk eyqlcenpkd yifwdslhlt qntynqfanl
361 iwngghmsds lvvgpyninn lfqip
//