LOCUS NM_118543 992 bp mRNA linear PLN 20-OCT-2022
DEFINITION Arabidopsis thaliana NADP-specific glutamate dehydrogenase
(AT4G24110), mRNA.
ACCESSION NM_118543
VERSION NM_118543.3
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 992)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 992)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 992)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 992)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
This record is derived from an annotated genomic sequence
(NC_003075).
On Sep 12, 2016 this sequence version replaced NM_118543.2.
FEATURES Location/Qualifiers
source 1..992
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
gene 1..992
/locus_tag="AT4G24110"
/gene_synonym="T19F6.100; T19F6_100"
/db_xref="Araport:AT4G24110"
/db_xref="GeneID:828511"
/db_xref="TAIR:AT4G24110"
CDS 137..889
/locus_tag="AT4G24110"
/gene_synonym="T19F6.100; T19F6_100"
/inference="Similar to RNA sequence,
EST:INSD:EG459709.1,INSD:AU230078.1,INSD:EG468080.1,
INSD:EG504655.1,INSD:DR358419.1,INSD:EL101453.1,
INSD:EL122354.1,INSD:DR378896.1,INSD:DR358420.1,
INSD:DR358421.1,INSD:ES162732.1,INSD:EG468079.1,
INSD:AU238831.1,INSD:CB253524.1,INSD:DR377598.1,
INSD:EG482331.1,INSD:ES211473.1,INSD:EG504654.1,
INSD:EG482333.1"
/inference="Similar to RNA sequence, mRNA:INSD:AK117990.1"
/note="unknown protein; Has 76 Blast hits to 76 proteins
in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1;
Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink)."
/codon_start=1
/product="NADP-specific glutamate dehydrogenase"
/protein_id="NP_194142.1"
/db_xref="GeneID:828511"
/db_xref="TAIR:AT4G24110"
/db_xref="Araport:AT4G24110"
/translation="MCRSPDFERYVEKESLKVKAFFVRFTGLPTRGFLPDSLTLLYPP
RINEAAFELDGSKIRPDSPAFVTLHRVVKGGDVIYGSRERVRVWEGIRFEVYMSEERV
IKGIFRKDEGDKWKLECECEMEEEGAAEVVVAAEGHVATATMARKHRRRRKQKIGFEC
LEEIPEEREEGRDSDGGVCFCTCSGESDDGEGEWEEVEWTAEMESETEGMGWAVDLGI
WVMCLGVGYLVSKASTKTLTSGRRRRTRRTFF"
ORIGIN
1 ttcaaacaaa acagaagtca caagtcgcca cctttctcta tgatgtttcc ctcttaaaaa
61 ggccgatcct ttcacaagtt tttagatcaa agtctacgag aaacagagag ttttctaacg
121 aacccaaaat acagaaatgt gtaggtcgcc cgatttcgag cgttatgtcg agaaagagag
181 cttaaaggtt aaagctttct tcgtccggtt cacaggttta cccacccgag gattcttacc
241 ggattctctc actcttctct acccaccacg aatcaacgaa gctgctttcg agcttgatgg
301 gtccaagatc cgacccgatt ccccagcttt cgtgacgctt cacagagtcg tgaaaggagg
361 agacgtgatt tacgggtcaa gagaacgtgt tcgggtctgg gaagggatcc gcttcgaggt
421 gtacatgagt gaggagaggg tgataaaagg tattttcaga aaagacgaag gagacaagtg
481 gaaacttgag tgcgagtgtg agatggaaga ggaaggagcg gcggaagttg ttgttgcggc
541 ggagggacac gtggcaacag cgacgatggc gaggaaacat agaagaagga gaaagcaaaa
601 gattgggttt gagtgtttgg aggagatacc ggaggagaga gaggaaggga gggattctga
661 cggcggcgtg tgtttttgca cgtgtagcgg cgaatctgac gacggagagg gagagtggga
721 agaggtggaa tggacggctg agatggagtc tgagacagaa ggaatgggat gggccgtaga
781 tttggggatt tgggttatgt gtttgggtgt gggctattta gtgtctaaag cctctaccaa
841 aaccttgaca agtgggagaa gaagaaggac aagaagaacc ttcttctaat tccttgtgta
901 atcaatcaat cagtgtaatt gtacaataac gttggaacat aaatgtaaaa aaaccatgat
961 tttgattaca atagtcgaga gttcattttt ct
//