LOCUS NM_001341391 2925 bp mRNA linear PLN 20-OCT-2022
DEFINITION Arabidopsis thaliana FAR1-related sequence 1 (FRS1), mRNA.
ACCESSION NM_001341391
VERSION NM_001341391.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 2925)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 2925)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2925)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 2925)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
This record is derived from an annotated genomic sequence
(NC_003075).
FEATURES Location/Qualifiers
source 1..2925
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
gene 1..2925
/gene="FRS1"
/locus_tag="AT4G19990"
/gene_synonym="F18F4.90; F18F4_90; FAR1-related sequence
1"
/db_xref="Araport:AT4G19990"
/db_xref="GeneID:827744"
/db_xref="TAIR:AT4G19990"
CDS 460..2784
/gene="FRS1"
/locus_tag="AT4G19990"
/gene_synonym="F18F4.90; F18F4_90; FAR1-related sequence
1"
/codon_start=1
/product="FAR1-related sequence 1"
/protein_id="NP_001328362.1"
/db_xref="GeneID:827744"
/db_xref="Araport:AT4G19990"
/db_xref="TAIR:AT4G19990"
/translation="MSSGECSNVQLDDHRKNNLEIDEGREFESKEEAFEFYKEYANSV
GFTTIIKASRRSRMTGKFIDAKFVCTRYGSKKEDIDTGLGTDGFNIPQARKRGRINRS
SSKTDCKAFLHVKRRQDGRWVVRSLVKEHNHEIFTGQADSLRELSGRRKLEKLNGAIV
KEVKSRKLEDGDVERLLNFFTDMQVENPFFFYSIDLSEEQSLRNIFWVDAKGRFDYTC
FSDVVSIDTTFIKNEYKLPLVAFTGVNHHGQFLLLGFGLLLTDESKSGFVWLFRAWLK
AMHGCRPRVILTKHDQMLKEAVLEVFPSSRHCFYMWDTLGQMPEKLGHVIRLEKKLVD
EINDAIYGSCQSEDFEKNWWEVVDRFHMRDNVWLQSLYEDREYWVPVYMKDVSLAGMC
TAQRSDSVNSGLDKYIQRKTTFKAFLEQYKKMIQERYEEEEKSEIETLYKQPGLKSPS
PFGKQMAEVYTREMFKKFQVEVLGGVACHPKKESEEDGVNKRTFRVQDYEQNRSFVVV
WNSESSEVVCSCRLFELKGFLCRHAMIVLQMSGELSIPSQYVLKRWTKDAKSREVMES
DQTDVESTKAQRYKDLCLRSLKLSEEASLSEESYNAVVNVLNEALRKWENKSNLIQNL
EESESVTAQDLPIHEEQNNTYDMNKDDNVADTGQEYSLQEVWKVTALQEQRNRYSILD
DYLSAQHMSHEMGQINSMASNRNGYCSVHQNIHSLQGQSITHPRLYETEQSSFRPEAM
YERLQDMGQSTVRHHPQQHCNASKHQHSNRNFSH"
ORIGIN
1 ctttcctttt ttgccctccc aattatatca tctttgcact ttagttaatt agtttctgat
61 tttgtctatt tcatactgta attctgtaaa tagtctctcg atcttcattt tgagtttgct
121 taaatatcat ttctgggttt ttgctttggt tcctaaattt gtttctattt taagtgatga
181 agattggagc tgactttgtt ggttttgaat ggttgactta tcatgttaaa gatgattcat
241 ttatgtattt gaagttgttt ttgcttacat tttgaggttt tagtattctg attttgctga
301 ttataagttt catctggtcc attgatactc aaatttatgt ttttcataaa agtttgcaac
361 ttggaaactg atcatagtgt ttcaacaggt ataatttgat caaacaagct ttggtttaga
421 ggggtgaaga cttttaacta atcaggtatt gatttcgaaa tgtcgtcagg agagtgtagc
481 aatgtgcagt tagatgatca taggaagaat aacttagaga ttgatgaagg gagagaattt
541 gaatcaaaag aggaagcttt tgagttctac aaagaatatg ctaactctgt tggttttact
601 accattatta aagctagtcg tcgttcaaga atgaccggga aatttattga tgccaagttt
661 gtttgtacgc gatatggaag caagaaagaa gacatagata ctggtttagg tactgatgga
721 tttaacattc ctcaagcaag aaaacgtggt agaattaacc ggtcatcgtc gaaaaccgat
781 tgtaaagctt ttttacatgt taagagaagg caagatggga ggtgggttgt tcgtagtttg
841 gtaaaagaac ataaccatga aatcttcact ggtcaagctg attccttaag agaattgagt
901 gggaggagaa aactcgagaa actaaacggt gctattgtta aagaggtgaa aagcaggaag
961 cttgaggatg gggatgttga aagactttta aacttcttta ctgatatgca agttgagaat
1021 cctttcttct tttattccat tgatctcagt gaggagcaga gtttaagaaa catcttttgg
1081 gttgatgcaa aaggtagatt tgattatact tgtttctctg atgttgtatc tattgacact
1141 acattcatca agaatgagta taaactgcct cttgttgctt ttactggcgt gaaccaccat
1201 ggacagttcc tgttgcttgg ttttggatta ttactaacgg atgagtctaa atctggattt
1261 gtttggcttt tccgggcatg gttaaaagcg atgcacggat gcagacctag agttatactt
1321 actaagcatg accaaatgct caaggaagct gtcttggagg tgttcccatc ttctagacat
1381 tgcttttata tgtgggatac tcttggccag atgccggaaa agcttggtca tgttatcaga
1441 ctagagaaaa aacttgtgga tgagataaat gatgctattt acgggtcttg ccagagcgag
1501 gactttgaaa agaattggtg ggaggtagtt gataggtttc atatgagaga caacgtgtgg
1561 cttcagtcgt tgtatgaaga tagggaatat tgggttcctg tatatatgaa agatgtatct
1621 ctagcgggaa tgtgtacagc tcagagatca gacagtgtga actctggttt agataaatac
1681 attcaaagga aaactacatt taaagcattt cttgagcagt acaagaagat gatacaagag
1741 aggtacgaag aggaagagaa atcggagatt gagacattgt ataaacaacc gggacttaag
1801 tcaccttcac catttgggaa gcaaatggct gaggtataca ctcgtgagat gttcaagaag
1861 tttcaggtgg aggtgttggg aggagttgct tgtcatccga agaaagaaag tgaagaagat
1921 ggggttaaca agaggacttt cagggttcaa gattatgaac agaaccgttc tttcgttgtg
1981 gtctggaact ctgaatcatc tgaagttgtc tgttcttgtc gattgtttga gttgaaaggt
2041 tttctttgta ggcacgcgat gattgttctg cagatgtcag gggaacttag tattccttct
2101 cagtatgtgt tgaagcgttg gacaaaggat gcaaaaagca gagaagtcat ggaatctgat
2161 cagactgatg tagaatcaac taaggctcaa cggtacaagg atctttgtct ccgttcttta
2221 aaactgagtg aggaagcatc tttatccgag gagagctata acgccgtggt caatgtgctg
2281 aatgaagctt taagaaagtg ggagaacaag agtaacttga tccaaaatct tgaagagtca
2341 gaatcggtta cagctcaaga tcttccaata catgaagaac agaacaatac atatgacatg
2401 aacaaagacg ataatgtcgc tgacacagga caggaatatt cattgcaaga agtctggaaa
2461 gtaactgctt tgcaagaaca aagaaaccga tactcgattc tcgatgacta cctcagtgcc
2521 caacatatgt ctcatgaaat gggacaaatc aactcgatgg cctcaaatcg caatggatat
2581 tgttctgtcc atcaaaacat acactcattg caggggcaat ccataactca cccaaggctt
2641 tatgaaactg aacaatcaag tttcagacca gaagctatgt atgaaagact acaagatatg
2701 ggacaatcaa ctgttagaca tcatcctcag caacattgca atgcttcgaa acatcaacac
2761 tccaacagga atttctctca ctgagtcact agctctgcct ttttcgagca ctaggattta
2821 aattgtgaat ttttcttaat ctttgatttt tacttttgat gataaaaatg aatatatgta
2881 cataaacaaa tgtggcaaat aataatatat gtataatttt gatgt
//