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Homo sapiens pre-mRNA splicing factor (PRP16) mRNA, complete cds

GenBank: AF038391.1

FASTA Graphics 

LOCUS       AF038391                3703 bp    mRNA    linear   PRI 08-MAY-1998
DEFINITION  Homo sapiens pre-mRNA splicing factor (PRP16) mRNA, complete cds.
ACCESSION   AF038391
VERSION     AF038391.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3703)
  AUTHORS   Zhou,Z. and Reed,R.
  TITLE     Human homologs of yeast prp16 and prp17 reveal conservation of the
            mechanism for catalytic step II of pre-mRNA splicing
  JOURNAL   EMBO J. 17 (7), 2095-2106 (1998)
   PUBMED   9524131
REFERENCE   2  (bases 1 to 3703)
  AUTHORS   Zhou,Z. and Reed,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-DEC-1997) Cell Biology, Harvard Medical School, 240
            Longwood Ave, Boston, MA 02115, USA
FEATURES             Location/Qualifiers
     source          1..3703
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
     gene            1..3703
                     /gene="PRP16"
     CDS             8..3691
                     /gene="PRP16"
                     /note="similar to yeast pre-mRNA splicing factor RNA
                     helicase Prp16"
                     /codon_start=1
                     /product="pre-mRNA splicing factor"
                     /protein_id="AAC39729.1"
                     /translation="MGDTSEDASIHRLEGTDLDCQVGGLICKSKSAASEQHVFKAPAP
                     RPSLLGLDLLASLKRREREEKDDGEDKKKSKVSSYKDWEESKDDQKDAEEEGGDQAGQ
                     NIRKDRHYRSARVETPSHPGGVSEEFWERSRQRERERREHGVYASSKEEKDWKKEKSR
                     DRDYDRKRDRDERDRSRHSSRSERDGGSERSSRRNEPESPRHRPKDAATPSRSTWEEE
                     DSGYGSSRRSQWESPSPTPSYRDSERSHRLSTRDRDRSVRGKYSDDTPLPTPSYKYNE
                     WADDRRHLGSTPRLSRGRGRREEGEEGISFDTEEERQQWEDDQRQADRDWYMMDEGYD
                     EFHNPLAYSSEDYVRRREQHLHKQKQKRISAQRRQINEDNERWETNRMLTSGVVHRLE
                     VDEDFEEDNAAKVHLMVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQT
                     VRKHREQKERKKAQHKHWELAGTKLGDIMGVKKEEEPDKAVTEDGKVDYRTEQKFADH
                     MKRKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLT
                     QYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTL
                     IKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIV
                     TSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAP
                     GDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGV
                     RKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGR
                     AGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDP
                     PPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEIL
                     LIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCND
                     HFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIG
                     EYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGP
                     MFYSVKQAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVRSTKI
                     YTPGRKEQGEPMAPRRTPARFGL"
ORIGIN      
        1 tcctgtgatg ggggacacca gtgaggatgc ctcgatccat cgattggaag gcactgatct
       61 ggactgtcag gttggtggtc ttatttgcaa gtccaaaagt gcggccagcg agcagcatgt
      121 cttcaaggct cctgctcccc gcccttcatt actgggactg gacttgctgg cttccctgaa
      181 acggagagag cgagaggaga aggacgatgg ggaggacaag aagaagtcca aagtctcctc
      241 ctacaaggac tgggaagaga gcaaggatga ccagaaggat gctgaggaag agggcggtga
      301 ccaggctggc caaaatatcc ggaaagacag acattatcgg tctgctcggg tagagactcc
      361 atcccatccg ggtggtgtga gcgaagagtt ttgggaacgc agtcggcaga gagagcggga
      421 gcggagggaa catggtgtct atgcctcgtc caaagaagaa aaggattgga agaaggagaa
      481 atcgcgggat cgagactatg accgcaagag ggacagagat gagcgggata gaagtaggca
      541 cagcagcaga tcagagcgag atggagggtc agagcgtagc agcagaagaa atgaacccga
      601 gagcccacga catcgaccta aagatgcagc caccccttca aggtctacct gggaggaaga
      661 ggacagtggc tatggctcct caaggcgctc acagtgggaa tcgccctccc cgacgccttc
      721 ctatcgggat tctgagcgga gccatcggct gtccactcga gatcgagaca ggtctgtgag
      781 gggcaagtac tcggatgaca cgcctctgcc aactccctcc tacaaatata acgagtgggc
      841 cgatgacaga agacacttgg ggtccacccc gcgtctgtcc aggggccgag gaagacgtga
      901 ggagggcgaa gaaggaattt catttgacac ggaggaggag cggcagcagt gggaagatga
      961 ccagaggcaa gccgatcggg attggtacat gatggacgag ggctatgacg agttccacaa
     1021 cccgctggcc tactcctccg aggactacgt gaggaggcgg gagcagcacc tgcataaaca
     1081 gaagcagaag cgcatttcag ctcagcggag acagatcaat gaggataacg agcgctggga
     1141 gacaaaccgc atgctcacca gtggggtggt ccatcggctg gaggtggatg aggactttga
     1201 agaggacaac gcggccaagg tgcatctgat ggtgcacaat ctggtgcctc cctttctgga
     1261 tgggcgcatt gtcttcacca agcagccgga gccagtgatt ccagtgaagg atgccacttc
     1321 tgacctggcc atcattgctc ggaaaggcag ccagacagtg cggaagcaca gggagcagaa
     1381 ggagcgcaag aaggctcagc acaaacactg ggaactggcg gggaccaaac tgggagatat
     1441 aatgggcgtc aagaaggagg aagagccaga taaagctgtg acggaggatg ggaaggtgga
     1501 ctacaggaca gagcagaagt ttgcagatca catgaagaga aagagcgaag ccagcagtga
     1561 atttgcaaag aagaagtcca tcctggagca gaggcagtac ctgcccatct ttgcagtgca
     1621 gcaggagctg ctcactatta tcagagacaa cagcatcgtg atcgtggttg gggagacggg
     1681 gagtggtaag accactcagc tgacgcagta cctgcatgaa gatggttaca cggactatgg
     1741 gatgattggg tgtacccagc cccggcgtgt agctgccatg tcagtggcca agagagtcag
     1801 tgaagagatg gggggaaacc ttggcgagga ggtgggctat gccatccgct ttgaagactg
     1861 cacttcagag aacaccttga tcaaatacat gactgacggg atcctgctcc gagagtccct
     1921 ccgggaagcc gacctggatc actacagtgc catcatcatg gacgaggccc acgagcgctc
     1981 cctcaacact gacgtgctct ttgggctgct ccgggaggta gtggctcggc gctcagacct
     2041 gaagctcatc gtcacatcag ccacgatgga tgcggagaag tttgctgcct tttttgggaa
     2101 tgtccccatc ttccacatcc ctggccgtac cttccctgtt gacatcctct tcagcaagac
     2161 cccacaggag gattacgtgg aggctgcagt gaagcagtcc ttgcaggtgc acctgtcggg
     2221 ggcccctgga gacatcctta tcttcatgcc tggccaagag gacattgagg tgacctcaga
     2281 ccagattgtg gagcatctgg aggaactgga gaacgcgcct gccctggctg tgctgcccat
     2341 ctactctcag ctgccttctg acctccaggc caaaatcttc cagaaggctc cagatggcgt
     2401 tcggaagtgc atcgttgcca ccaatattgc cgagacgtct ctcactgttg acggcatcat
     2461 gtttgttatc gattctggtt attgcaaatt aaaggtcttc aaccccagga ttggcatgga
     2521 tgctctgcag atctatccca ttagccaggc caatgccaac cagcggtcag ggcgagccgg
     2581 caggacgggc ccaggtcagt gtttcaggct ctacacccag agcgcctaca agaatgagct
     2641 cctgaccacc acagtgcccg agatccagag gactaacctg gccaacgtgg tgctgctgct
     2701 caagtccctc ggggtgcagg acctgctgca gttccacttc atggacccgc ccccggagga
     2761 caacatgctc aactctatgt atcagctctg gatcctcggg gccctggaca acacaggtgg
     2821 tctgacctct accgggcggc tgatggtgga gttcccgctg gaccctgccc tgtccaagat
     2881 gctcatcgtg tcctgtgaca tgggctgcag ctccgagatc ctgctcatcg tttccatgct
     2941 ctcggtccca gccatcttct acaggcccaa gggtcgagag gaggagagtg atcaaatccg
     3001 ggagaagttc gctgttcctg agagcgatca tttgacctac ctgaatgttt acctgcagtg
     3061 gaagaacaat aattactcca ccatctggtg taacgatcat ttcatccatg ctaaggccat
     3121 gcggaaggtc cgggaggtgc gagctcaact caaggacatc atggtgcagc agcggatgag
     3181 cctggcctcg tgtggcactg actgggacat cgtcaggaag tgcatctgtg ctgcctattt
     3241 ccaccaagca gccaagctca agggaatcgg ggagtacgtg aacatccgca cagggatgcc
     3301 ctgccacttg caccccacca gctccctttt tggaatgggc tacaccccag attacatagt
     3361 gtatcacgag ttggtcatga ccaccaagga gtatatgcag tgtgtgaccg ctgtggacgg
     3421 ggagtggctg gcggagctgg gccccatgtt ctatagcgtg aaacaggcgg gcaagtcacg
     3481 gcaggagaac cgtcgtcggg ccaaagagga agcctctgcc atggaggagg agatggcgct
     3541 ggccgaggag cagctgcgag cccggcggca ggagcaggag aagcgcagcc ccctgggcag
     3601 tgtcaggtct acgaagatct acactccagg ccggaaagag caaggggagc ccatggcccc
     3661 tcgccgcacg ccagcccgct ttggtctgtg agctgaggct gtc
//
8..3691
/gene="PRP16"
/note="similar to yeast pre-mRNA splicing factor RNA
helicase Prp16"
/codon_start=1
/product="pre-mRNA splicing factor"
/protein_id="AAC39729.1"
/translation="MGDTSEDASIHRLEGTDLDCQVGGLICKSKSAASEQHVFKAPAP
RPSLLGLDLLASLKRREREEKDDGEDKKKSKVSSYKDWEESKDDQKDAEEEGGDQAGQ
NIRKDRHYRSARVETPSHPGGVSEEFWERSRQRERERREHGVYASSKEEKDWKKEKSR
DRDYDRKRDRDERDRSRHSSRSERDGGSERSSRRNEPESPRHRPKDAATPSRSTWEEE
DSGYGSSRRSQWESPSPTPSYRDSERSHRLSTRDRDRSVRGKYSDDTPLPTPSYKYNE
WADDRRHLGSTPRLSRGRGRREEGEEGISFDTEEERQQWEDDQRQADRDWYMMDEGYD
EFHNPLAYSSEDYVRRREQHLHKQKQKRISAQRRQINEDNERWETNRMLTSGVVHRLE
VDEDFEEDNAAKVHLMVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQT
VRKHREQKERKKAQHKHWELAGTKLGDIMGVKKEEEPDKAVTEDGKVDYRTEQKFADH
MKRKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLT
QYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTL
IKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIV
TSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAP
GDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGV
RKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGR
AGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDP
PPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEIL
LIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIWCND
HFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIG
EYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGP
MFYSVKQAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVRSTKI
YTPGRKEQGEPMAPRRTPARFGL"
Feature AF038391 : 1 segment
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