U.S. flag

An official website of the United States government

Unknown (protein for IMAGE:8102839), partial [Danio rerio]

GenBank: AAI50355.1

Identical Proteins FASTA Graphics 

LOCUS       AAI50355                 430 aa            linear   VRT 23-JUL-2016
DEFINITION  Unknown (protein for IMAGE:8102839), partial [Danio rerio].
ACCESSION   AAI50355
VERSION     AAI50355.1
DBSOURCE    accession BC150354.1
KEYWORDS    .
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
REFERENCE   1  (residues 1 to 430)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (residues 1 to 430)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JUL-2007) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: John Postlethwait, University of Oregon
            cDNA Library Preparation: Dr. Sumio Sugano
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 312 Row: k Column: 23
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 50417363.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Danio rerio"
                     /db_xref="taxon:7955"
                     /clone="IMAGE:8102839"
                     /tissue_type="Ovary"
                     /clone_lib="NIH_ZGC_5"
                     /lab_host="DH10B"
                     /note="Vector: pME18S-FL3"
     Protein         1..>430
                     /product="Unknown (protein for IMAGE:8102839)"
     Region          55..149
                     /region_name="Daxx"
                     /note="Daxx N-terminal Rassf1C-interacting domain;
                     pfam03344"
                     /db_xref="CDD:460889"
     Site            order(86,88..89,92..93,96,126..127,129..130,132..133,
                     136..137,140,145)
                     /site_type="other"
                     /note="Rassf1C interface [polypeptide binding]"
                     /db_xref="CDD:240522"
     Region          195..400
                     /region_name="DAXX_histone_binding"
                     /note="Histone binding domain of the death-domain
                     associated protein (DAXX); cd13150"
                     /db_xref="CDD:240523"
     Site            order(207..208,211,214..215,217..223,225..226,229..230,
                     232..235,237..238,241,244..245,248,261..263,296..300,303,
                     330,334..335,338,341,344..345,348..349,351..353,355,382,
                     385..386,389..390,392..393,396..397,400)
                     /site_type="other"
                     /note="Histone H3.3 interface [polypeptide binding]"
                     /db_xref="CDD:240523"
     Site            order(221,296,298,301,342,345..346,349,354,361..364,367,
                     370,374,377,381,384..385,388..389,392,396)
                     /site_type="other"
                     /note="Histone H4 interface [polypeptide binding]"
                     /db_xref="CDD:240523"
     CDS             1..430
                     /coded_by="BC150354.1:22..>1312"
ORIGIN      
        1 magavmesiv ilddddeeaa stsascsqat aqhlktpvks qpapapthit qspfasakkd
       61 thvlkvenek lfnefvehcs khsqehpevm tylqtryska lptfltsvef rntlgrcltr
      121 aqanagktfv yinelctvlk qhtprkrssi qslsvkakpe kksngvnvke dtqgeqdrgk
      181 dvkqeeeesk ktkrasrrqi aylenllkvy neeirrlqeg dlslddleke dssyiqehkl
      241 krkmmkiyek lcelkgcntl tgrvieqkip ysgtrypein kkverfinss eallnppdys
      301 dilkivqran erynlqlsrk qqtqisqeaf retgnklqer rhldmvynfg shltdpykpt
      361 ldpalmdpal hrklrsnrdv aissleevin kyankqedme veetkkrqdr erlkkeavng
      421 qqseskkkkk
//
1..430
/coded_by="BC150354.1:22..>1312"
Feature AAI50355 : 1 segment
Display: FASTA GenBank Help
Details

Supplemental Content

Change region shown

Customize view

Reference sequence information

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
External link. Please review our privacy policy.