Clinical Genetic Test
offered by
GTR Test Accession:
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GTR000604276.1
Registered in GTR:
2023-04-17
View version history
GTR000604276.1,
registered in GTR:
2023-04-17
Last annual review date for the lab: 2023-04-17
Past due
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At a Glance
Test purpose:
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Diagnosis;
Prognostic;
Recurrence; ...
Conditions (8):
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Complex vascular malformation with associated anomalies;
Capillary malformation;
Lymphatic malformation 10
more...
Genes (4):
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ACVRL1 (12q13.13);
KRAS (12p12.1);
PIK3CA (3q26.32);
TEK (9p21.2)
Methods (1):
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Molecular Genetics - Sequence analysis of select exons: Next-Generation (NGS)/Massively parallel sequencing (MPS)
Target population: Help
Not provided
Clinical validity:
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Not provided
Clinical utility:
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Not provided
Ordering Information
Offered by:
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Test short name:
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VMD4KIDS
Specimen Source:
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- Fresh tissue
- Frozen tissue
- Isolated DNA
- Paraffin block
- Peripheral (whole) blood
- Skin
Who can order: Help
- Genetic Counselor
- Health Care Provider
Lab contact:
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Jaclyn Biegel, PhD, FACMG, Lab Director
Contact Policy:
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Laboratory can only accept contact from health care providers. Patients/families are encouraged to discuss genetic testing options with their health care provider.
How to Order:
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Test service:
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Clinical Testing/Confirmation of Mutations Identified Previously
Informed consent required:
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Decline to answer
Pre-test genetic counseling required:
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Decline to answer
Post-test genetic counseling required:
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Decline to answer
Recommended fields not provided:
Test Order Code,
Test strategy,
Test development
Conditions
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Total conditions: 8
Condition/Phenotype | Identifier |
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Test Targets
Genes
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Total genes: 4
Gene | Associated Condition | Germline or Somatic | Allele (Lab-provided) | Variant in NCBI |
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Methodology
Total methods: 1
Method Category
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Test method
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Instrument *
Sequence analysis of select exons
Next-Generation (NGS)/Massively parallel sequencing (MPS)
* Instrument: Not provided
Clinical Information
Test purpose:
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Diagnosis;
Prognostic;
Recurrence;
Risk Assessment;
Therapeutic management
Recommended fields not provided:
Clinical validity,
Clinical utility,
Target population,
What is the protocol for interpreting a variation as a VUS?,
Are family members with defined clinical status recruited to assess significance of VUS without charge?,
Will the lab re-contact the ordering physician if variant interpretation changes?,
Is research allowed on the sample after clinical testing is complete?,
Sample negative report,
Sample positive report
Technical Information
Test Comments:
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Gene List: ABCC6, ABCC9, ACTB, ACTG1, ACVRL1, ADAMTS3, AFF4, AKT1, AKT2, AKT3, ALG8, AMER1, ANGPT2, ANKRD11, ANTXR1 , ARAF, ARID1A, ASXL1, ATP2A2, ATP2C1, BMPR2 , BRAF, BRD4, BRWD3, CAMTA1, CARD14, CASK, CAV1, CBL, CCBE1, CCDC88A, CCM2, CCND2, CDC42, CDKN1C, CELSR1, CNTNAP2, COL3A1, COX7B, CTNNB1, DCHS1, DEPDC5, DICER1, DNMT3A, DUSP5, EBP, …
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Availability:
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Tests performed
Entire test performed in-house
Entire test performed in-house
Analytical Validity:
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The validation data was reviewed for accuracy, precision, reportable range, analytical sensitivity, analytical specificity, reference interval, and clinical performance parameter studies, and the performance of the method is considered acceptable for patient. Clinical samples run during validation were found to have - Sensitivity = 100% Specificity = 100% Accuracy = …
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Proficiency testing (PT):
Is proficiency testing performed for this test?
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No
No
Recommended fields not provided:
Test Confirmation,
Assay limitations,
Description of internal test validation method,
Citations for Analytical validity,
PT Provider,
Description of PT method,
Major CAP category, CAP category, CAP test list
Regulatory Approval
FDA Review:
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Not provided
Additional Information
Reviews:
Clinical resources:
Consumer resources:
IMPORTANT NOTE:
NIH does not independently verify information submitted to GTR; it relies on submitters to provide information that is accurate and not misleading.
NIH makes no endorsements of tests or laboratories listed in GTR. GTR is not a substitute for medical advice.
Patients and consumers
with specific questions about a genetic test should contact a health care provider or a genetics professional.