GTR Test Accession:
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GTR000592982.1
Registered in GTR:
2021-04-29
View version history
GTR000592982.1,
registered in GTR:
2021-04-29
Last annual review date for the lab: 2023-04-07
Past due
LinkOut
At a Glance
Test purpose:
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Mutation Confirmation
Conditions (1):
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NAFLD1
Genes (1):
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PNPLA3 (22q13.31)
Methods (1):
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Molecular Genetics - Targeted variant analysis: qPCR
Target population: Help
Not provided
Clinical validity:
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The rs738409 variation is strongly associated with fatty liver disease …
Clinical utility:
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Not provided
Ordering Information
Offered by:
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Specimen Source:
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- Peripheral (whole) blood
Who can order: Help
- Health Care Provider
- Licensed Physician
Test service:
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Genotyping
Result interpretation
Result interpretation
Test development:
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Test developed by laboratory (no manufacturer test name)
Informed consent required:
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Decline to answer
Pre-test genetic counseling required:
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Decline to answer
Post-test genetic counseling required:
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Decline to answer
Recommended fields not provided:
Test Order Code,
How to Order,
Lab contact for this test,
Contact policy,
Test strategy
Conditions
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Total conditions: 1
Condition/Phenotype | Identifier |
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Test Targets
Genes
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Total genes: 1
Gene | Associated Condition | Germline or Somatic | Allele (Lab-provided) | Variant in NCBI |
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Methodology
Total methods: 1
Method Category
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Test method
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Instrument *
Targeted variant analysis
qPCR
* Instrument: Not provided
Clinical Information
Test purpose:
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Mutation Confirmation
Clinical validity:
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The rs738409 variation is strongly associated with fatty liver disease (Basu 2019).
Recommended fields not provided:
Clinical utility,
Target population,
What is the protocol for interpreting a variation as a VUS?,
Is research allowed on the sample after clinical testing is complete?,
Sample negative report,
Sample positive report
Technical Information
Availability:
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Tests performed
Entire test performed in-house
Entire test performed in-house
Analytical Validity:
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During validation, no false negatives or false positive results were observed. Analytical specificity and sensitivity are >99%.
Proficiency testing (PT):
Is proficiency testing performed for this test?
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No
No
Recommended fields not provided:
Test Confirmation,
Assay limitations,
Description of internal test validation method,
Citations for Analytical validity,
PT Provider,
Description of PT method,
Major CAP category, CAP category, CAP test list
Regulatory Approval
FDA Review:
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Not provided
Additional Information
Reviews:
Clinical resources:
Molecular resources:
Consumer resources:
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Patients and consumers
with specific questions about a genetic test should contact a health care provider or a genetics professional.