GTR Test Accession:
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GTR000520908.7
CAP
Last updated in GTR:
2023-12-11
View version history
GTR000520908.7,
last updated:
2023-12-11
GTR000520908.6,
last updated:
2023-09-26
GTR000520908.5,
last updated:
2016-11-08
GTR000520908.4,
last updated:
2015-11-24
GTR000520908.3,
last updated:
2015-01-09
GTR000520908.2,
last updated:
2015-01-06
GTR000520908.1,
registered in GTR:
2014-12-24
Last annual review date for the lab: 2024-09-18
LinkOut
At a Glance
Methods (1):
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Cytogenetics - Karyotyping: G-banding
Target population: Help
Individuals with a personal or family history of infertility or …
Clinical validity:
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G-banded chromosome analysis will detect polyploidies, aneuploidies, large balanced alterations …
Clinical utility:
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Establish or confirm diagnosis;
Reproductive decision-making
Ordering Information
Offered by:
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Specimen Source:
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- Amniocytes
- Amniotic fluid
- Bone marrow
- Cell culture
- Chorionic villi
- Cord blood
- Fetal blood
- Fibroblasts
- Fresh tissue
- Peripheral (whole) blood
- Product of conception (POC)
- Skin
- View specimen requirements
Who can order: Help
- Genetic Counselor
- Health Care Provider
- Licensed Dentist
- Licensed Physician
- Nurse Practitioner
- Physician Assistant
- Registered Nurse
Lab contact:
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Whitney Neufeld-Kaiser, MS, CGC, Certified Genetic counselor, CGC, Genetic Counselor
[email protected]
206-598-8684
[email protected]
206-598-8684
Contact Policy:
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Laboratory can only accept contact from health care providers. Patients/families are encouraged to discuss genetic testing options with their health care provider.
How to Order:
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The requisition is found under the how to order URL. We are able to receive specimens 24 hours a day, 7 days a week. Please call the lab at 206-598-4488 for further information.
Order URL
Order URL
Test service:
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Clinical Testing/Confirmation of Mutations Identified Previously
Confirmation of research findings
Custom Balanced Chromosome Rearrangement Studies
Marker Chromosome Identification
Result interpretation
X-Chromosome Inactivation Studies
Confirmation of research findings
Custom Balanced Chromosome Rearrangement Studies
Marker Chromosome Identification
Result interpretation
X-Chromosome Inactivation Studies
Test additional service:
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Custom Prenatal Testing
Test development:
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Test developed by laboratory but exempt from FDA oversight (eg. NYS CLEP approved, offered within a hospital or clinic)
Informed consent required:
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No
Test strategy:
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Consider reflex testing to cytogenomic microarray analysis when chromosome analysis is normal in a child being evaluated for a recognized aneuploidy syndrome.
Pre-test genetic counseling required:
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No
Post-test genetic counseling required:
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No
Recommended fields not provided:
Test Order Code
Conditions
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Total conditions: 16
Condition/Phenotype | Identifier |
---|
Test Targets
Chromosomal regions/Mitochondria
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Total chromosomal regions/mitochondria: 6
Chromosomal region/Mitochondrion | Associated condition |
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Methodology
Total methods: 1
Method Category
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Test method
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Instrument *
Karyotyping
G-banding
* Instrument: Not provided
Clinical Information
Test purpose:
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Diagnosis;
Recurrence;
Risk Assessment
Clinical validity:
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G-banded chromosome analysis will detect polyploidies, aneuploidies, large balanced alterations (i.e. reciprocal translocations, Robertsonian translocations, inversions, balanced insertions), and large unbalanced translocations, duplications and deletions.
Clinical utility:
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Establish or confirm diagnosis
Reproductive decision-making
View citations (1)
- Laboratory guideline for Turner syndrome. Wolff DJ, et al. Genet Med. 2010;12(1):52-5. doi:10.1097/GIM.0b013e3181c684b2. PMID: 20081420.
Reproductive decision-making
Target population:
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Individuals with a personal or family history of infertility or 2 or more unexplained pregnancy losses; individuals with features consistent with aneuploidy syndromes, such as Down syndrome, Klinefelter syndrome, or Turner syndrome; individuals with a family history of an aneuploidy syndrome or chromosome rearrangement (for example a translocation or an …
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Variant Interpretation:
What is the protocol for interpreting a variation as a VUS?
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Parental chromosome analysis is requested when a rare polymorphism is detected in the proband.
Parental chromosome analysis is requested when a rare polymorphism is detected in the proband.
Are family members with defined clinical status recruited to assess significance of VUS without charge?
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No.
No.
Will the lab re-contact the ordering physician if variant interpretation changes?
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No.
No.
Research:
Is research allowed on the sample after clinical testing is complete?
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No
No
Sample reports:
Recommended fields not provided:
Sample negative report
Technical Information
Availability:
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Tests performed
Entire test performed in-house
Entire test performed in-house
Analytical Validity:
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Band resolution of 450-850
Assay limitations:
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The standard cytogenetic methodology used in this analysis does not routinely detect subtle rearrangements, low-level mosaicism (note that screening of additional cells can be ordered if mosaicism is suspected), or microdeletions and microduplications below the resolution of the banding level. This test will not detect either point mutations or DNA …
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Proficiency testing (PT):
Is proficiency testing performed for this test?
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Yes
Method used for proficiency testing: Help
Formal PT program
PT Provider: Help
American College of Medical Genetics / College of American Pathologists, ACMG/CAP
Description of PT method: Help
As part of CAP accreditation, proficiency testing is performed three times per year. The laboratory is provided with approximately a dozen constitutional unknown specimens for testing each year, and results are returned to CAP for evaluation. The UW Cytogenetics and Genomics Laboratory has consistently participated and successfully identified the expected … View more
Yes
Method used for proficiency testing: Help
Formal PT program
PT Provider: Help
American College of Medical Genetics / College of American Pathologists, ACMG/CAP
Description of PT method: Help
As part of CAP accreditation, proficiency testing is performed three times per year. The laboratory is provided with approximately a dozen constitutional unknown specimens for testing each year, and results are returned to CAP for evaluation. The UW Cytogenetics and Genomics Laboratory has consistently participated and successfully identified the expected … View more
Recommended fields not provided:
Test Confirmation,
Citations to support assay limitations,
Description of internal test validation method,
Citations for Analytical validity,
Major CAP category, CAP category, CAP test list
Regulatory Approval
FDA Review:
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Category:
Not Applicable
Additional Information
Reviews:
Clinical resources:
Consumer resources:
IMPORTANT NOTE:
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NIH makes no endorsements of tests or laboratories listed in GTR. GTR is not a substitute for medical advice.
Patients and consumers
with specific questions about a genetic test should contact a health care provider or a genetics professional.