GTR Test Accession:
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GTR000240864.6
CAP
Last updated in GTR:
2024-07-26
View version history
GTR000240864.6,
last updated:
2024-07-26
GTR000240864.5,
last updated:
2018-09-24
GTR000240864.4,
last updated:
2017-08-08
GTR000240864.3,
last updated:
2016-07-27
GTR000240864.2,
last updated:
2014-05-02
GTR000240864.1,
registered in GTR:
2014-05-02
Last annual review date for the lab: 2024-07-30
LinkOut
At a Glance
Test purpose:
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Diagnosis;
Mutation Confirmation;
Risk Assessment
Conditions (1):
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Androgen resistance syndrome
Genes (1):
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AR (Xq12)
Methods (1):
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Molecular Genetics - Sequence analysis of the entire coding region: Bi-directional Sanger Sequence Analysis
Target population: Help
Individuals exhibiting symptoms consistent with Androgen Insensitivity Syndrome; generally characterized …
Clinical validity:
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This test will detect mutations in 65-95% of patients with …
Clinical utility:
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Establish or confirm diagnosis
Ordering Information
Offered by:
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Test short name:
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AIS
Specimen Source:
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- Amniocytes
- Amniotic fluid
- Buccal swab
- Cell culture
- Isolated DNA
- Peripheral (whole) blood
- View specimen requirements
Who can order: Help
- Genetic Counselor
- Health Care Provider
- Licensed Physician
- Nurse Practitioner
- Physician Assistant
LOINC codes:
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Lab contact:
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Lynne Whetsell, BS, MB(ASCP), Staff
[email protected]
918-502-3808
Tonya Jones, BS, CG(ASCP), MB(ASCP), Administrator
[email protected]
918-502-1730
[email protected]
918-502-3808
Tonya Jones, BS, CG(ASCP), MB(ASCP), Administrator
[email protected]
918-502-1730
Contact Policy:
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Post-test email/phone consultation regarding genetic test results and interpretation is provided to patients/families.
Pre-test email/phone consultation regarding genetic test results and interpretation is provided to patients/families.
Pre-test email/phone consultation regarding genetic test results and interpretation is provided to patients/families.
How to Order:
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1. Choose the desired test from the Test Directory.
2. Obtain information on the required specimen for the specific test from the Test Information page.
3. Fill out the necessary test requisition form and any other required forms from the Forms page.
4. Provide the required Billing information or make …
2. Obtain information on the required specimen for the specific test from the Test Information page.
3. Fill out the necessary test requisition form and any other required forms from the Forms page.
4. Provide the required Billing information or make …
Order URL
Test service:
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Clinical Testing/Confirmation of Mutations Identified Previously
Test additional service:
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Custom Prenatal Testing
Custom mutation-specific/Carrier testing
Custom mutation-specific/Carrier testing
Test development:
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Test developed by laboratory but exempt from FDA oversight (eg. NYS CLEP approved, offered within a hospital or clinic)
Informed consent required:
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Based on applicable state law
Pre-test genetic counseling required:
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No
Post-test genetic counseling required:
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No
Recommended fields not provided:
Test Order Code,
Test strategy
Conditions
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Total conditions: 1
Condition/Phenotype | Identifier |
---|
Test Targets
Genes
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Total genes: 1
Gene | Associated Condition | Germline or Somatic | Allele (Lab-provided) | Variant in NCBI |
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Methodology
Total methods: 1
Method Category
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Test method
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Instrument
Sequence analysis of the entire coding region
Bi-directional Sanger Sequence Analysis
Applied Biosystems 3130 Capillary Sequencing System
Clinical Information
Test purpose:
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Diagnosis;
Mutation Confirmation;
Risk Assessment
Clinical validity:
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This test will detect mutations in 65-95% of patients with Complete AIS (CAIS) and 40-45% of patients with Partial AIS (PAIS).
Clinical utility:
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Establish or confirm diagnosis
Target population:
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Individuals exhibiting symptoms consistent with Androgen Insensitivity Syndrome; generally characterized by feminization of the genitalia at birth, abnormal secondary sexual development in puberty, and infertility in individuals with a 46,XY karyotype.
Variant Interpretation:
What is the protocol for interpreting a variation as a VUS?
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HGMD, Disease databases, and ClinVar used for classification. Recommend testing parents or other appropriate family members.
HGMD, Disease databases, and ClinVar used for classification. Recommend testing parents or other appropriate family members.
Are family members with defined clinical status recruited to assess significance of VUS without charge?
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Yes.
Yes.
Will the lab re-contact the ordering physician if variant interpretation changes?
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Yes. Ordering physician or genetic counselor contacted and a revised report issued
Yes. Ordering physician or genetic counselor contacted and a revised report issued
Recommended fields not provided:
Is research allowed on the sample after clinical testing is complete?,
Sample negative report,
Sample positive report
Technical Information
Availability:
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Tests performed
Entire test performed in-house
Entire test performed in-house
Analytical Validity:
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99%; determined by in-house validations.
Proficiency testing (PT):
Is proficiency testing performed for this test?
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Yes
Method used for proficiency testing: Help
CAP Survey MGL3 for Sequencing Platform
PT Provider: Help
American College of Medical Genetics / College of American Pathologists, ACMG/CAP
Yes
Method used for proficiency testing: Help
CAP Survey MGL3 for Sequencing Platform
PT Provider: Help
American College of Medical Genetics / College of American Pathologists, ACMG/CAP
VUS:
Software used to interpret novel variations
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Polyphen and SIFT
Laboratory's policy on reporting novel variations Help
Routine Report
Polyphen and SIFT
Laboratory's policy on reporting novel variations Help
Routine Report
Recommended fields not provided:
Test Confirmation,
Assay limitations,
Description of internal test validation method,
Citations for Analytical validity,
Description of PT method,
Major CAP category, CAP category, CAP test list
Regulatory Approval
FDA Review:
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Category:
FDA exercises enforcement discretion
Additional Information
Clinical resources:
Molecular resources:
Practice guidelines:
IMPORTANT NOTE:
NIH does not independently verify information submitted to GTR; it relies on submitters to provide information that is accurate and not misleading.
NIH makes no endorsements of tests or laboratories listed in GTR. GTR is not a substitute for medical advice.
Patients and consumers
with specific questions about a genetic test should contact a health care provider or a genetics professional.