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Links from GEO Profiles

Items: 20

1.
Value/Rank Plot

mnmA - Steady-state external pH effect on enteric bacteria

Annotation:
mnmA, tRNA(Gln,Lys,Glu) U34 2-thiouridylase
Organism:
Escherichia coli K-12
Reporter:
GPL199, ycfB_b1133_at (ID_REF), GDS1827, 945690 (Gene ID), b1133 (ORF)
DataSet type:
Expression profiling by array, count, 15 samples
ID:
20678678

GEO DataSets Gene Profile neighbors Chromosome neighbors

2.
Value/Rank Plot

c1513 - Steady-state external pH effect on enteric bacteria

Annotation:
c1513, Nudix hydrolase ymfB (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, b1134_at (ID_REF), GDS1827, 1035249 (Gene ID), 945689 (Gene ID), b1134 (ORF)
DataSet type:
Expression profiling by array, count, 15 samples
ID:
20672885

GEO DataSets Gene Profile neighbors Chromosome neighbors

3.
Value/Rank Plot

ycfC - Steady-state external pH effect on enteric bacteria

Annotation:
ycfC, hypothetical protein (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, ycfC_b1132_at (ID_REF), GDS1827, 1035247 (Gene ID), 913287 (Gene ID), 945693 (Gene ID), 959647 (Gene ID), b1132 (ORF)
DataSet type:
Expression profiling by array, count, 15 samples
ID:
20678679

GEO DataSets Gene Profile neighbors Chromosome neighbors

4.
Value/Rank Plot

ymfC - Steady-state external pH effect on enteric bacteria

Annotation:
ymfC, 23S rRNA pseudouridine synthase E (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, ymfC_b1135_at (ID_REF), GDS1827, 913282 (Gene ID), 945701 (Gene ID), 959820 (Gene ID), b1135 (ORF)
DataSet type:
Expression profiling by array, count, 15 samples
ID:
20679747

GEO DataSets Gene Profile neighbors Chromosome neighbors

5.
Value/Rank Plot

purB - Steady-state external pH effect on enteric bacteria

Annotation:
purB, adenylosuccinate lyase (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, purB_b1131_at (ID_REF), GDS1827, 913288 (Gene ID), 945695 (Gene ID), b1131 (ORF)
DataSet type:
Expression profiling by array, count, 15 samples
ID:
20677705

GEO DataSets Gene Profile neighbors Chromosome neighbors

6.
Value/Rank Plot

icd - Steady-state external pH effect on enteric bacteria

Annotation:
icd, isocitrate dehydrogenase; e14 prophage attachment site; tellurite reductase
Organism:
Escherichia coli K-12
Reporter:
GPL199, icdA_b1136_at (ID_REF), GDS1827, 945702 (Gene ID), b1136 (ORF)
DataSet type:
Expression profiling by array, count, 15 samples
ID:
20674185

GEO DataSets Gene Profile neighbors Chromosome neighbors

7.
Value/Rank Plot

phoP - Steady-state external pH effect on enteric bacteria

Annotation:
phoP, response regulator in two-component regulatory system with PhoQ
Organism:
Escherichia coli K-12
Reporter:
GPL199, phoP_b1130_at (ID_REF), GDS1827, 945697 (Gene ID), b1130 (ORF)
DataSet type:
Expression profiling by array, count, 15 samples
ID:
20677588

GEO DataSets Gene Profile neighbors Chromosome neighbors

8.
Value/Rank Plot

ymfD - Steady-state external pH effect on enteric bacteria

Annotation:
ymfD, e14 prophage; putative SAM-dependent methyltransferase
Organism:
Escherichia coli K-12
Reporter:
GPL199, ymfD_b1137_at (ID_REF), GDS1827, 945329 (Gene ID), b1137 (ORF)
DataSet type:
Expression profiling by array, count, 15 samples
ID:
20679748

GEO DataSets Gene Profile neighbors Chromosome neighbors

9.
Value/Rank Plot

phoQ - Steady-state external pH effect on enteric bacteria

Annotation:
phoQ, sensor protein PhoQ (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, phoQ_b1129_at (ID_REF), GDS1827, 1035243 (Gene ID), 913290 (Gene ID), 946326 (Gene ID), 959617 (Gene ID), b1129 (ORF)
DataSet type:
Expression profiling by array, count, 15 samples
ID:
20677589

GEO DataSets Gene Profile neighbors Chromosome neighbors

10.
Value/Rank Plot

ymfE - Steady-state external pH effect on enteric bacteria

Annotation:
ymfE, e14 prophage; putative inner membrane protein
Organism:
Escherichia coli K-12
Reporter:
GPL199, ymfE_b1138_at (ID_REF), GDS1827, 946722 (Gene ID), b1138 (ORF)
DataSet type:
Expression profiling by array, count, 15 samples
ID:
20679749

GEO DataSets Gene Profile neighbors Chromosome neighbors

11.
Value/Rank Plot

ycfD - Steady-state external pH effect on enteric bacteria

Annotation:
ycfD, hypothetical protein (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, ycfD_b1128_at (ID_REF), GDS1827, 1035205 (Gene ID), 913325 (Gene ID), 945391 (Gene ID), 959592 (Gene ID), b1128 (ORF)
DataSet type:
Expression profiling by array, count, 15 samples
ID:
20678680

GEO DataSets Gene Profile neighbors Chromosome neighbors

12.
Value/Rank Plot

lit - Steady-state external pH effect on enteric bacteria

Annotation:
lit, T4 phage exclusion protein; cell death peptidase, e14 prophage
Organism:
Escherichia coli K-12
Reporter:
GPL199, lit_b1139_at (ID_REF), GDS1827, 948421 (Gene ID), b1139 (ORF)
DataSet type:
Expression profiling by array, count, 15 samples
ID:
20677204

GEO DataSets Gene Profile neighbors Chromosome neighbors

13.
Value/Rank Plot

pepT - Steady-state external pH effect on enteric bacteria

Annotation:
pepT, peptidase T (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, pepT_b1127_at (ID_REF), GDS1827, 1035204 (Gene ID), 913326 (Gene ID), 946333 (Gene ID), 959591 (Gene ID), b1127 (ORF)
DataSet type:
Expression profiling by array, count, 15 samples
ID:
20677543

GEO DataSets Gene Profile neighbors Chromosome neighbors

14.
Value/Rank Plot

intE - Steady-state external pH effect on enteric bacteria

Annotation:
intE, e14 prophage; putative integrase
Organism:
Escherichia coli K-12
Reporter:
GPL199, intE_b1140_at (ID_REF), GDS1827, 948034 (Gene ID), b1140 (ORF)
DataSet type:
Expression profiling by array, count, 15 samples
ID:
20677119

GEO DataSets Gene Profile neighbors Chromosome neighbors

15.
Value/Rank Plot

xisE - Steady-state external pH effect on enteric bacteria

Annotation:
xisE, e14 prophage; putative excisionase
Organism:
Escherichia coli K-12
Reporter:
GPL199, b1141_at (ID_REF), GDS1827, 945705 (Gene ID), b1141 (ORF)
DataSet type:
Expression profiling by array, count, 15 samples
ID:
20672886

GEO DataSets Gene Profile neighbors Chromosome neighbors

16.
Value/Rank Plot

potA - Steady-state external pH effect on enteric bacteria

Annotation:
potA, putrescine/spermidine ABC transporter ATPase protein (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, potA_b1126_at (ID_REF), GDS1827, 1035201 (Gene ID), 913327 (Gene ID), 946323 (Gene ID), 959590 (Gene ID), b1126 (ORF)
DataSet type:
Expression profiling by array, count, 15 samples
ID:
20677612

GEO DataSets Gene Profile neighbors Chromosome neighbors

17.
Value/Rank Plot

ymfI - Steady-state external pH effect on enteric bacteria

Annotation:
ymfI, e14 prophage; uncharacterized protein
Organism:
Escherichia coli K-12
Reporter:
GPL199, ymfI_b1143_at (ID_REF), GDS1827, 945712 (Gene ID), b1143 (ORF)
DataSet type:
Expression profiling by array, count, 15 samples
ID:
20679751

GEO DataSets Gene Profile neighbors Chromosome neighbors

18.
Value/Rank Plot

potB - Steady-state external pH effect on enteric bacteria

Annotation:
potB, spermidine/putrescine ABC transporter permease
Organism:
Escherichia coli K-12
Reporter:
GPL199, potB_b1125_at (ID_REF), GDS1827, 945692 (Gene ID), b1125 (ORF)
DataSet type:
Expression profiling by array, count, 15 samples
ID:
20677613

GEO DataSets Gene Profile neighbors Chromosome neighbors

19.
Value/Rank Plot

potC - Steady-state external pH effect on enteric bacteria

Annotation:
potC, spermidine/putrescine ABC transporter membrane protein (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, potC_b1124_at (ID_REF), GDS1827, 1035103 (Gene ID), 912458 (Gene ID), 945691 (Gene ID), 959476 (Gene ID), b1124 (ORF)
DataSet type:
Expression profiling by array, count, 15 samples
ID:
20677614

GEO DataSets Gene Profile neighbors Chromosome neighbors

20.
Value/Rank Plot

potD - Steady-state external pH effect on enteric bacteria

Annotation:
potD, spermidine/putrescine ABC transporter periplasmic substrate-binding protein (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, potD_b1123_at (ID_REF), GDS1827, 1035102 (Gene ID), 912995 (Gene ID), 945682 (Gene ID), 959475 (Gene ID), b1123 (ORF)
DataSet type:
Expression profiling by array, count, 15 samples
ID:
20677615

GEO DataSets Gene Profile neighbors Chromosome neighbors

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