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Status
Public on Mar 10, 2006
Title
isoflurane 03
Sample type
RNA
Source name
basolateral amygdala
Organism
Rattus norvegicus Characteristics
male, 275-300g
Extracted molecule
total RNA
Label
fluorscent label via ENZO BioArray RNA Transcript Labeling Kit
Description
Fear conditioning in rats leads to long term memory (LTM) formation. A central substrate for this type of LTM is the basolateral amygdala. We sought the expression changes specific to LTM at 6h following pain (a component of conditioning), following anesthesia with isoflurane (a general anesthetic and an effective amnestic agent), and following conditioning during isoflurane. For this also see GSE1779.
Data processing
raw data from Affymetrix
Submission date
Mar 09, 2006
Last update date
Mar 10, 2006
Contact name
Achim Bell
E-mail(s)
[email protected] Organization name
SUNY Stony Brook
Department
Anesthesiology
Street address
101 Nicolls Road
City
Stony Brook
State/province
NY
ZIP/Postal code
11794-8480
Country
USA
Platform ID
GPL341 Series (1)
GSE1779 Effect of Isoflurane and LTM on basolateral amygdala
Data table header descriptions ID_REF VALUE ‘signal’ a measure of the abundance of a transcript
ABS_CALL the call in absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE ‘detection p-value’, p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-TrpnX-M_at
2.9
A
0.988616
AFFX-TrpnX-5_at
4.5
A
0.852061
AFFX-TrpnX-3_at
2.8
A
0.941556
AFFX-ThrX-M_at
10.6
A
0.672921
AFFX-ThrX-5_at
22.3
A
0.737173
AFFX-ThrX-3_at
6.3
A
0.949771
AFFX-r2-P1-cre-5_at
10298.4
P
0.000244
AFFX-r2-P1-cre-3_at
12650.4
P
0.000244
AFFX-r2-Ec-bioD-5_at
1843.1
P
0.000244
AFFX-r2-Ec-bioD-3_at
2423
P
0.000244
AFFX-r2-Ec-bioC-5_at
417.5
P
0.000244
AFFX-r2-Ec-bioC-3_at
813.4
P
0.000244
AFFX-r2-Ec-bioB-M_at
222.7
P
0.000244
AFFX-r2-Ec-bioB-5_at
96.4
P
0.000244
AFFX-r2-Ec-bioB-3_at
192.7
P
0.000244
AFFX-r2-Bs-thr-M_s_at
87.8
A
0.246094
AFFX-r2-Bs-thr-5_s_at
18.2
A
0.303711
AFFX-r2-Bs-thr-3_s_at
18.7
A
0.665527
AFFX-r2-Bs-phe-M_at
4.7
A
0.904785
AFFX-r2-Bs-phe-5_at
6.5
A
0.780518
15923 429 Kbytes .Supplementary data files not provided
