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Sample GSM994842 Query DataSets for GSM994842
Status Public on Nov 01, 2012
Title Dendritic cells BDCA1 donor1
Sample type RNA
 
Source name Healthy donor1
Organism Homo sapiens
Characteristics cell: primary cells
cell population: Dendritic cells BDCA1
Extracted molecule total RNA
Extraction protocol RNA was extracted using Rneasy Microquit (Qiagen).
Label biotin
Label protocol 100 ng of polysomal-bound RNA were employed to synthesize double-stranded cDNA using 2 successive reverse-transcription reactions according to the std affymetrix protocol
 
Hybridization protocol Labelled DNA was hybrized on the Affymetrix Human Gene 1.1 ST processed on an Affymetrix GeneTitan device.
Scan protocol Array scanning was performed according to the manufacturer's instruction (Affymetrix)
Description RMA expression value derived from Genesprings GX 7.3 (Agilent)
Data processing Statistical analysis were performed using GenSpring GX 7.3 (Agilent). Expression data was normalized using the RMA algorithm. Probes with an expression lower than 25 Units were filtered out.
 
Submission date Aug 30, 2012
Last update date Nov 01, 2012
Contact name Maxime Touzot
E-mail(s) [email protected]
Organization name Institut Curie
Lab U932
Street address 26 rue d'ULM
City PAris
ZIP/Postal code 75005
Country France
 
Platform ID GPL11532
Series (1)
GSE40484 Human inflammatory dendritic cells induce Th17 differentiation

Data table header descriptions
ID_REF
VALUE log(2) RMA

Data table
ID_REF VALUE
7892501 4.4061
7892502 7.983385
7892503 4.009157
7892504 8.482563
7892505 4.02185
7892506 7.672659
7892507 3.902361
7892508 8.700174
7892509 10.92454
7892510 6.729158
7892511 6.107855
7892512 5.258056
7892513 5.483978
7892514 10.56489
7892515 8.651404
7892516 3.123786
7892517 7.09828
7892518 3.186539
7892519 6.088587
7892520 8.843609

Total number of rows: 33297

Table truncated, full table size 549 Kbytes.




Supplementary file Size Download File type/resource
GSM994842_IS09_ARN0003_s1h1_C05_hGene.CEL.gz 4.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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