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Status
Public on Aug 06, 2004
Title
nl138
Sample type
RNA
Source name
primary acute lymphoblastic leukemia cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample Type: Human Total RNA Project: Evans Sample User: jmorris Experiment User: jmorris Algorithm: Statistical Corner+ Avg:76, Count:32 Corner- Avg:6377, Count:32 BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:18.590319,SFGene:All Background:Avg:53.22,Stdev:0.83,Max:54.5,Min:50.2 Noise:Avg:2.15,Stdev:0.09,Max:2.4,Min:2.0 RawQ:2.30 Keywords = ALL
Submission date
Sep 06, 2003
Last update date
May 28, 2005
Contact name
William E Evans
E-mail(s)
[email protected]
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL96
Series (5)
GSE635
Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE646
PRED sensitive all ALL
GSE648
VCR sensitive all ALL
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.
Data table
ID_REF
VALUE
Detection_p_value
1007_s_at
918.4
0.006532
1053_at
545.1
0.019304
117_at
52.6
0.479380
121_at
1107.5
0.006532
1255_g_at
16.3
0.697453
1294_at
1248.2
0.000805
1316_at
283.7
0.048995
1320_at
27.3
0.697483
1405_i_at
181.6
0.254899
1431_at
190.1
0.089405
1438_at
391.9
0.054470
1487_at
517.0
0.081337
1494_f_at
79.6
0.284747
1598_g_at
820.5
0.150527
160020_at
612.7
0.175989
1729_at
406.1
0.043968
1773_at
299.6
0.027860
177_at
35.3
0.715253
179_at
1013.8
0.054470
1861_at
420.4
0.009985
Total number of rows: 22283 Table truncated, full table size 562 Kbytes .Supplementary file
Size
Download
File type/resource
GSM9822.CEL.gz
3.2 Mb
(ftp) (http)
CEL