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Status
Public on Aug 06, 2004
Title
nl092
Sample type
RNA
Source name
primary acute lymphoblastic leukemia cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample Type: Human Total RNA Project: Evans Sample User: jmorris Experiment User: jmorris Algorithm: Statistical Corner+ Avg:56, Count:32 Corner- Avg:4920, Count:32 BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:42.980484,SFGene:All Background:Avg:40.55,Stdev:0.83,Max:42.3,Min:38.2 Noise:Avg:1.38,Stdev:0.04,Max:1.5,Min:1.2 RawQ:1.89 Keywords = ALL
Submission date
Sep 06, 2003
Last update date
May 28, 2005
Contact name
William E Evans
E-mail(s)
[email protected]
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL96
Series (3)
GSE635
Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE647
PRED resistant all ALL
GSE650
DNR sensitive all ALL
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.
Data table
ID_REF
VALUE
Detection_p_value
1007_s_at
451.8
0.302547
1053_at
257.8
0.150527
117_at
309.1
0.250724
121_at
2048.4
0.001892
1255_g_at
155.7
0.378184
1294_at
1512.1
0.001141
1316_at
398.8
0.021866
1320_at
217.3
0.641310
1405_i_at
24.1
0.957858
1431_at
361.1
0.048995
1438_at
67.5
0.520620
1487_at
738.2
0.302547
1494_f_at
444.3
0.175989
1598_g_at
1033.5
0.175989
160020_at
1397.8
0.039365
1729_at
91.2
0.581931
1773_at
373.8
0.250724
177_at
32.8
0.749276
179_at
1178.5
0.234557
1861_at
454.8
0.098054
Total number of rows: 22283 Table truncated, full table size 561 Kbytes .Supplementary file
Size
Download
File type/resource
GSM9776.CEL.gz
3.0 Mb
(ftp) (http)
CEL